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The map label for this gene is fdhD [H]

Identifier: 62389419

GI number: 62389419

Start: 543411

End: 544328

Strand: Reverse

Name: fdhD [H]

Synonym: cg0616

Alternate gene names: 62389419

Gene position: 544328-543411 (Counterclockwise)

Preceding gene: 62389420

Following gene: 62389418

Centisome position: 16.58

GC content: 51.31

Gene sequence:

>918_bases
ATGGGTCGGATTACCCAAAACTTGCAGGTCCCACGCGTTGTGTCCACTGACGAGCAAGTTTTTGTTAACACTCGTCCGGA
TACTGTTGCGGTGGAGGAGCCTCTAGAAATTCGGGTTAATGGCACTGCGCTTACCACCACTATGCGCACGCCCGGCCATG
ATATTGAGTTGGTGCATGGCCTCCTCTTGTCAGAAGGTCTGATCACGGATGCTTCTGAGGTTTTTACCGCCCGCTATTGT
GCAGGAGCTGTTGGCCCAGATAATCAAAATACGTACAACGTCTTAGAACTTGATGTCATCCCCAAAGACAATCCGGCCCG
GGATCCCGTCCAGAATCCCTCCCATAATCCCGAAGGCAGCCAACACGAAGCACTCCACATCCCAACTTTCCAACCGGTAC
GCGAACTAAACCTCGTGGCAGCCCAACGCAATGTGCTGACTACGTCTGCTTGTGGTGTTTGTGGCACGACGTCTATTGAG
CAGTTGATGAACAAGAAGGGCTGGCCCATTACGCCGATTACACCGGATCCTCGGATGATTGTGTCGTTGCCAGATAAGTT
GAAGTCGAAGCAGAAGATTTTCGACAAAACTGGTGGGGTTCATGCTGCTGGTTTGGCCACGCTTGATGGTGAGATGTTGA
TTATTCGAGAGGATGTCGGTCGGCATAACGCAGCTGACAAAGTTATAGGAAACATGCTGATGGCGGGAAAGCTCCCCTTG
GAAAACACTATTTTGGTGATGAGTTCTAGGGCGTCTTTTGAGCTTGTCCAAAAGGCTGCCATGGCTGGAATTTCGGGTGT
AATCGCTGTTGGTGCTGCAACATCGCTGGCAATCGAGGCGGCGCAGGATTCAGGTATTTTCCTTGCTGGTTTTGTTCGGG
GCAACAAGTTTAACCACTATGCGGGCGAGCTCGGATAA

Upstream 100 bases:

>100_bases
GTTCTGGAACAAGCACTGATGATTGGGCCGAGTCCACGTTGGTTAATGCTCTGCATCTTCAAGAAATCATCGCTAAAAAT
TACCCGGAGGCTAAATAAAA

Downstream 100 bases:

>100_bases
TGCCAGAACAGGTAGAACAGCCGAATCAAGCACGCGAAGAGCTGGAGAGGATTTTCCCGCAGTGGTTCGTGTCAGCTGCA
GAGAACAGGGATATGTCTGT

Product: formate dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MGRITQNLQVPRVVSTDEQVFVNTRPDTVAVEEPLEIRVNGTALTTTMRTPGHDIELVHGLLLSEGLITDASEVFTARYC
AGAVGPDNQNTYNVLELDVIPKDNPARDPVQNPSHNPEGSQHEALHIPTFQPVRELNLVAAQRNVLTTSACGVCGTTSIE
QLMNKKGWPITPITPDPRMIVSLPDKLKSKQKIFDKTGGVHAAGLATLDGEMLIIREDVGRHNAADKVIGNMLMAGKLPL
ENTILVMSSRASFELVQKAAMAGISGVIAVGAATSLAIEAAQDSGIFLAGFVRGNKFNHYAGELG

Sequences:

>Translated_305_residues
MGRITQNLQVPRVVSTDEQVFVNTRPDTVAVEEPLEIRVNGTALTTTMRTPGHDIELVHGLLLSEGLITDASEVFTARYC
AGAVGPDNQNTYNVLELDVIPKDNPARDPVQNPSHNPEGSQHEALHIPTFQPVRELNLVAAQRNVLTTSACGVCGTTSIE
QLMNKKGWPITPITPDPRMIVSLPDKLKSKQKIFDKTGGVHAAGLATLDGEMLIIREDVGRHNAADKVIGNMLMAGKLPL
ENTILVMSSRASFELVQKAAMAGISGVIAVGAATSLAIEAAQDSGIFLAGFVRGNKFNHYAGELG
>Mature_304_residues
GRITQNLQVPRVVSTDEQVFVNTRPDTVAVEEPLEIRVNGTALTTTMRTPGHDIELVHGLLLSEGLITDASEVFTARYCA
GAVGPDNQNTYNVLELDVIPKDNPARDPVQNPSHNPEGSQHEALHIPTFQPVRELNLVAAQRNVLTTSACGVCGTTSIEQ
LMNKKGWPITPITPDPRMIVSLPDKLKSKQKIFDKTGGVHAAGLATLDGEMLIIREDVGRHNAADKVIGNMLMAGKLPLE
NTILVMSSRASFELVQKAAMAGISGVIAVGAATSLAIEAAQDSGIFLAGFVRGNKFNHYAGELG

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=281, Percent_Identity=31.3167259786477, Blast_Score=104, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 32631; Mature: 32500

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRITQNLQVPRVVSTDEQVFVNTRPDTVAVEEPLEIRVNGTALTTTMRTPGHDIELVHG
CCCCCCCCCCCEEECCCCEEEEECCCCEEEECCCEEEEECCEEEEEEECCCCCHHHHHHH
LLLSEGLITDASEVFTARYCAGAVGPDNQNTYNVLELDVIPKDNPARDPVQNPSHNPEGS
HHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCC
QHEALHIPTFQPVRELNLVAAQRNVLTTSACGVCGTTSIEQLMNKKGWPITPITPDPRMI
CCCEEECCCCCHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEE
VSLPDKLKSKQKIFDKTGGVHAAGLATLDGEMLIIREDVGRHNAADKVIGNMLMAGKLPL
EECCHHHHHHHHHHHHCCCEEEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHCCCCCC
ENTILVMSSRASFELVQKAAMAGISGVIAVGAATSLAIEAAQDSGIFLAGFVRGNKFNHY
CCEEEEEECCCHHHHHHHHHHHCCCCEEECCCHHEEEEEECCCCCEEEEEEEECCCCCCC
AGELG
CCCCC
>Mature Secondary Structure 
GRITQNLQVPRVVSTDEQVFVNTRPDTVAVEEPLEIRVNGTALTTTMRTPGHDIELVHG
CCCCCCCCCCEEECCCCEEEEECCCCEEEECCCEEEEECCEEEEEEECCCCCHHHHHHH
LLLSEGLITDASEVFTARYCAGAVGPDNQNTYNVLELDVIPKDNPARDPVQNPSHNPEGS
HHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCC
QHEALHIPTFQPVRELNLVAAQRNVLTTSACGVCGTTSIEQLMNKKGWPITPITPDPRMI
CCCEEECCCCCHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEE
VSLPDKLKSKQKIFDKTGGVHAAGLATLDGEMLIIREDVGRHNAADKVIGNMLMAGKLPL
EECCHHHHHHHHHHHHCCCEEEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHCCCCCC
ENTILVMSSRASFELVQKAAMAGISGVIAVGAATSLAIEAAQDSGIFLAGFVRGNKFNHY
CCEEEEEECCCHHHHHHHHHHHCCCCEEECCCHHEEEEEECCCCCEEEEEEEECCCCCCC
AGELG
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12840036 [H]