| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is 62389370
Identifier: 62389370
GI number: 62389370
Start: 492641
End: 493915
Strand: Reverse
Name: 62389370
Synonym: cg0557
Alternate gene names: NA
Gene position: 493915-492641 (Counterclockwise)
Preceding gene: 62389376
Following gene: 62389362
Centisome position: 15.05
GC content: 57.49
Gene sequence:
>1275_bases ATGGGGTTTGTGTCTACAACTTTTGATGTGTTGATCATCGGCGCGGGCCCCTCAGGTGCCAGCGCCGCCGTCCATGCGGC CAGGACTGGGCTTCAAACATTGCTTATCGACGCCTCCTCCTTCCCGCGGGATAAAACGTGTGGCGATGGCCTTACTCCCC GTGCGATTCACCAGCTAGAACTTCTAGGTGTTGCTGATCAGGTTACCGGGGATTATTTCAACAAGGGCTTGAAACTGCAT GGTTTTGGTGGCTCTGTTGAGGCGCCGTGGCCGGAGACATATTTCACGAATAAGGGTTCCGCGATGTCGCGGATGGAGTT CGATGATTTGTTATTCCGCTTGGCAAAATCTCATGAGGAAGTAACCACGTGGGAGAACGCGAGCGCCCAAGACCCCATTT TGAGGGGGAATTTCTTGGAAGGCGTTGTGATTAATCACGCAGGGCAAGAGAAAACCGTCAAGGCGAAGCATGTGATTATT GCCGATGGTGTCCGCTCCCCTTTCGGTAAGAAACTGGGTAGGCAGTGGCAACGCGATGAGGTGTATGGCATTGCGGCTCG TGCTTATTGTGAAACTCCGCTGTCTGATGAACCGTGGATTCACTCCCATGTGGAACTGCGCGATGAAGATGGTGTGGTGC AGCCAGGATATGGGTGGATTTTCCCGCTGGGCAACGGCACGGTGAATTTGGGTTGTGGCGCGCTCTCGACGGATACGAGA CCAGCGAAGATCAATACGAAGAAATTGTTGAGCTTCTATGCGGGTCAGCGTCGTAAAGCATGGCAACTCGGGCCCGAGCA CGACGTCGCCTCTGCCCTGCTGCCTATGGGCGGCGCGGTGTCGAATGTGGCTGGCGCGAACTGGATGCTGATCGGCGATT CCGCCGCGTGTGTGAACCCGCTGAACGGCGAAGGCATCGACTATGGCCTGGAAACCGCGGCGATGGCCGTCGACACGCTT GTGGAAAACCCCAAGCGCGATTTGACCTTGGTATGGCCACATAGGTTGCGCGACGCGTACGGCGAGACCTTCATGTTGGC GCGCACGGCTGCTCGACTGCTGACGTACCCGCAGTTTTTGCCGATGGCTGGGCCGCTCGCATTCCGCGGGCCGCTGCAAA AGGCCATCATGCCGGCGGCTGCGCGTTTGATGGGCAACCTGATCACAGAGGAGGATAAAGACCTGCTCGCCAGGGGTTGG CAGGCCGCCGGATCCGCGATTAGTTGGGCGCGGAAGGGCTCCCCTCTGTGGGACTCGACTAGTTCTCTGGTTTAA
Upstream 100 bases:
>100_bases GAATCCAGTGAAATGGACAAAAAGCTTTTTGTTTAACCGTAGTCGACGGAAGGCACTTGAAGCACCTTGGGTTAGTCTTC TTGCTCTCCGGACTGAGACA
Downstream 100 bases:
>100_bases TCGCCGAGTGCAGCGCGACGATGCCGAAGGTCAGGTTCTGCCAACCGCAATCTGACCAACCATTCTGGTTGATCTCCCGT GCTAGTTCCGCCTGGCTAGG
Product: monooxygenase, FAD-binding
Products: NA
Alternate protein names: DGGGPL reductase; 2,3-di-O-geranylgeranylglyceryl phosphate reductase; Geranylgeranyl reductase; GGR [H]
Number of amino acids: Translated: 424; Mature: 423
Protein sequence:
>424_residues MGFVSTTFDVLIIGAGPSGASAAVHAARTGLQTLLIDASSFPRDKTCGDGLTPRAIHQLELLGVADQVTGDYFNKGLKLH GFGGSVEAPWPETYFTNKGSAMSRMEFDDLLFRLAKSHEEVTTWENASAQDPILRGNFLEGVVINHAGQEKTVKAKHVII ADGVRSPFGKKLGRQWQRDEVYGIAARAYCETPLSDEPWIHSHVELRDEDGVVQPGYGWIFPLGNGTVNLGCGALSTDTR PAKINTKKLLSFYAGQRRKAWQLGPEHDVASALLPMGGAVSNVAGANWMLIGDSAACVNPLNGEGIDYGLETAAMAVDTL VENPKRDLTLVWPHRLRDAYGETFMLARTAARLLTYPQFLPMAGPLAFRGPLQKAIMPAAARLMGNLITEEDKDLLARGW QAAGSAISWARKGSPLWDSTSSLV
Sequences:
>Translated_424_residues MGFVSTTFDVLIIGAGPSGASAAVHAARTGLQTLLIDASSFPRDKTCGDGLTPRAIHQLELLGVADQVTGDYFNKGLKLH GFGGSVEAPWPETYFTNKGSAMSRMEFDDLLFRLAKSHEEVTTWENASAQDPILRGNFLEGVVINHAGQEKTVKAKHVII ADGVRSPFGKKLGRQWQRDEVYGIAARAYCETPLSDEPWIHSHVELRDEDGVVQPGYGWIFPLGNGTVNLGCGALSTDTR PAKINTKKLLSFYAGQRRKAWQLGPEHDVASALLPMGGAVSNVAGANWMLIGDSAACVNPLNGEGIDYGLETAAMAVDTL VENPKRDLTLVWPHRLRDAYGETFMLARTAARLLTYPQFLPMAGPLAFRGPLQKAIMPAAARLMGNLITEEDKDLLARGW QAAGSAISWARKGSPLWDSTSSLV >Mature_423_residues GFVSTTFDVLIIGAGPSGASAAVHAARTGLQTLLIDASSFPRDKTCGDGLTPRAIHQLELLGVADQVTGDYFNKGLKLHG FGGSVEAPWPETYFTNKGSAMSRMEFDDLLFRLAKSHEEVTTWENASAQDPILRGNFLEGVVINHAGQEKTVKAKHVIIA DGVRSPFGKKLGRQWQRDEVYGIAARAYCETPLSDEPWIHSHVELRDEDGVVQPGYGWIFPLGNGTVNLGCGALSTDTRP AKINTKKLLSFYAGQRRKAWQLGPEHDVASALLPMGGAVSNVAGANWMLIGDSAACVNPLNGEGIDYGLETAAMAVDTLV ENPKRDLTLVWPHRLRDAYGETFMLARTAARLLTYPQFLPMAGPLAFRGPLQKAIMPAAARLMGNLITEEDKDLLARGWQ AAGSAISWARKGSPLWDSTSSLV
Specific function: Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2
COG id: COG0644
COG function: function code C; Dehydrogenases (flavoproteins)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the geranylgeranyl reductase family. DGGGPL reductase subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011777 - InterPro: IPR002938 - InterPro: IPR003042 [H]
Pfam domain/function: PF01494 FAD_binding_3 [H]
EC number: NA
Molecular weight: Translated: 45814; Mature: 45682
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFVSTTFDVLIIGAGPSGASAAVHAARTGLQTLLIDASSFPRDKTCGDGLTPRAIHQLE CCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHH LLGVADQVTGDYFNKGLKLHGFGGSVEAPWPETYFTNKGSAMSRMEFDDLLFRLAKSHEE HHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCHH VTTWENASAQDPILRGNFLEGVVINHAGQEKTVKAKHVIIADGVRSPFGKKLGRQWQRDE HHCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEEEECCCCCHHHHHHHHHCCCCH VYGIAARAYCETPLSDEPWIHSHVELRDEDGVVQPGYGWIFPLGNGTVNLGCGALSTDTR HHEEEHHHHCCCCCCCCCCCCCEEEEECCCCEECCCCCEEEECCCCEEEECCCCCCCCCC PAKINTKKLLSFYAGQRRKAWQLGPEHDVASALLPMGGAVSNVAGANWMLIGDSAACVNP CCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHHCCCCEEEEEECCHHCCCC LNGEGIDYGLETAAMAVDTLVENPKRDLTLVWPHRLRDAYGETFMLARTAARLLTYPQFL CCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHCCHHHHHHHHHHHHHCHHHH PMAGPLAFRGPLQKAIMPAAARLMGNLITEEDKDLLARGWQAAGSAISWARKGSPLWDST CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHCCCCCCCCC SSLV CCCC >Mature Secondary Structure GFVSTTFDVLIIGAGPSGASAAVHAARTGLQTLLIDASSFPRDKTCGDGLTPRAIHQLE CCCCCEEEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHH LLGVADQVTGDYFNKGLKLHGFGGSVEAPWPETYFTNKGSAMSRMEFDDLLFRLAKSHEE HHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCHH VTTWENASAQDPILRGNFLEGVVINHAGQEKTVKAKHVIIADGVRSPFGKKLGRQWQRDE HHCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEEEECCCCCHHHHHHHHHCCCCH VYGIAARAYCETPLSDEPWIHSHVELRDEDGVVQPGYGWIFPLGNGTVNLGCGALSTDTR HHEEEHHHHCCCCCCCCCCCCCEEEEECCCCEECCCCCEEEECCCCEEEECCCCCCCCCC PAKINTKKLLSFYAGQRRKAWQLGPEHDVASALLPMGGAVSNVAGANWMLIGDSAACVNP CCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHHCCCCEEEEEECCHHCCCC LNGEGIDYGLETAAMAVDTLVENPKRDLTLVWPHRLRDAYGETFMLARTAARLLTYPQFL CCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHCCHHHHHHHHHHHHHCHHHH PMAGPLAFRGPLQKAIMPAAARLMGNLITEEDKDLLARGWQAAGSAISWARKGSPLWDST CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHCCCCCCCCC SSLV CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA