| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is menB [H]
Identifier: 62389361
GI number: 62389361
Start: 484102
End: 485061
Strand: Reverse
Name: menB [H]
Synonym: cg0548
Alternate gene names: 62389361
Gene position: 485061-484102 (Counterclockwise)
Preceding gene: 62389362
Following gene: 62389360
Centisome position: 14.78
GC content: 59.58
Gene sequence:
>960_bases ATGAGCAACTACAGCACCGACAACCCTTTTGATCCCACCCAATGGGCCACCGTTCCAGGTTTTGAAGAATTCACCGACAT CACCTACCACCGCCACGTGGGCACCACCCGCGCCGATGGCATCGTGCGCATCGCCTTCGACCGCCCCGAAGTTCGCAATG CTTTCCGCCCCCACACCGTCGACGAGCTTTACCAAGCCCTCGACCACGCGCGCCGCACCCCAGATGTTGGAACCATCCTG CTCACCGGCAACGGCCCCAGCGAAAAAGACGGTGGCTGGGCGTTCTGCTCCGGCGGCGACCAACGCATCCGCGGCCGCTC CGGCTACCAATACGCCACCGAACACGCGCGCGACGATGCCACCGCTGATGTCTCCACGGTAGATATTGCCCGCACCAAAG TTGAAGGCGGACGCCTCCACATTTTGGAAGTCCAACGCCTCATCCGCACCATGCCTAAAGTTGTCATCGCAGTAGTCAAC GGCTGGGCAGCCGGCGGTGGGCACTCCCTCCATGTCGTTTGCGACCTCACCATCGCTTCCCGCCAAGAAGCACGCTTCAA GCAAACCGACGCTGACGTGGGATCCTTCGACGCTGGCTACGGCTCCGCCTACCTAGCGAAAATGGTCGGACAGAAAAACG CCCGCGAAATCTTCTTCCTCGGACGCACCTACGACGCCGAACGCATGCAACAAATGGGCGCAGTCAACATCGTGGCCGAC CACGGCGACCTAGAAAAAGAAGCCATCCAAGCAGCCCGCGAAATCAACACCAAATCCCCCACCGCGCAACGCATGCTGAA ATTCGCCTTCAATCTCACCGACGATGGCCTCATGGGACAACAAGTCTTCGCCGGCGAAGCCACCCGCCTGGCCTACATGA CGGATGAAGCCGTAGAGGGTAAGGAAGCATTCCTAGAAAAGCGCGAACCCAACTGGAATGAATTCCCTTACTACTACTAG
Upstream 100 bases:
>100_bases ATGTGGGTGAGATAACCGACCGTGATGTCGCCCTAGCAAAAGTCATCGACGCCCACGCCAAGACCTTGGCCATTTCGGCA GAGGCTTAAGGTTAAAGATT
Downstream 100 bases:
>100_bases TGAGTTCATGGGGTCCTAAAACACTTACCGGGTACGAGCTCGGCTGTCTTAATTGTTTTTCATGCCCAGCCTCCGCCTCA CTTTGAGAGGGGGAGGCTTG
Product: naphthoate synthase
Products: NA
Alternate protein names: DHNA-CoA synthase [H]
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MSNYSTDNPFDPTQWATVPGFEEFTDITYHRHVGTTRADGIVRIAFDRPEVRNAFRPHTVDELYQALDHARRTPDVGTIL LTGNGPSEKDGGWAFCSGGDQRIRGRSGYQYATEHARDDATADVSTVDIARTKVEGGRLHILEVQRLIRTMPKVVIAVVN GWAAGGGHSLHVVCDLTIASRQEARFKQTDADVGSFDAGYGSAYLAKMVGQKNAREIFFLGRTYDAERMQQMGAVNIVAD HGDLEKEAIQAAREINTKSPTAQRMLKFAFNLTDDGLMGQQVFAGEATRLAYMTDEAVEGKEAFLEKREPNWNEFPYYY
Sequences:
>Translated_319_residues MSNYSTDNPFDPTQWATVPGFEEFTDITYHRHVGTTRADGIVRIAFDRPEVRNAFRPHTVDELYQALDHARRTPDVGTIL LTGNGPSEKDGGWAFCSGGDQRIRGRSGYQYATEHARDDATADVSTVDIARTKVEGGRLHILEVQRLIRTMPKVVIAVVN GWAAGGGHSLHVVCDLTIASRQEARFKQTDADVGSFDAGYGSAYLAKMVGQKNAREIFFLGRTYDAERMQQMGAVNIVAD HGDLEKEAIQAAREINTKSPTAQRMLKFAFNLTDDGLMGQQVFAGEATRLAYMTDEAVEGKEAFLEKREPNWNEFPYYY >Mature_318_residues SNYSTDNPFDPTQWATVPGFEEFTDITYHRHVGTTRADGIVRIAFDRPEVRNAFRPHTVDELYQALDHARRTPDVGTILL TGNGPSEKDGGWAFCSGGDQRIRGRSGYQYATEHARDDATADVSTVDIARTKVEGGRLHILEVQRLIRTMPKVVIAVVNG WAAGGGHSLHVVCDLTIASRQEARFKQTDADVGSFDAGYGSAYLAKMVGQKNAREIFFLGRTYDAERMQQMGAVNIVADH GDLEKEAIQAAREINTKSPTAQRMLKFAFNLTDDGLMGQQVFAGEATRLAYMTDEAVEGKEAFLEKREPNWNEFPYYY
Specific function: Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) [H]
COG id: COG0447
COG function: function code H; Dihydroxynaphthoic acid synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=277, Percent_Identity=29.6028880866426, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI31542718, Length=293, Percent_Identity=27.3037542662116, Blast_Score=82, Evalue=9e-16, Organism=Escherichia coli, GI1788597, Length=306, Percent_Identity=45.7516339869281, Blast_Score=247, Evalue=7e-67, Organism=Escherichia coli, GI87082183, Length=286, Percent_Identity=26.2237762237762, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1787659, Length=285, Percent_Identity=27.0175438596491, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI221142681, Length=283, Percent_Identity=26.1484098939929, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1787660, Length=274, Percent_Identity=28.4671532846715, Blast_Score=65, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17540714, Length=265, Percent_Identity=27.5471698113208, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17554946, Length=273, Percent_Identity=26.7399267399267, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI25145438, Length=292, Percent_Identity=29.1095890410959, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI20129971, Length=267, Percent_Identity=27.3408239700375, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24653477, Length=267, Percent_Identity=27.3408239700375, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24653139, Length=307, Percent_Identity=22.8013029315961, Blast_Score=75, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001753 - InterPro: IPR010198 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.1.3.36 [H]
Molecular weight: Translated: 35540; Mature: 35409
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNYSTDNPFDPTQWATVPGFEEFTDITYHRHVGTTRADGIVRIAFDRPEVRNAFRPHTV CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHCCCCCCH DELYQALDHARRTPDVGTILLTGNGPSEKDGGWAFCSGGDQRIRGRSGYQYATEHARDDA HHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHCCCCC TADVSTVDIARTKVEGGRLHILEVQRLIRTMPKVVIAVVNGWAAGGGHSLHVVCDLTIAS CCCCEEEEHHHEECCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECC RQEARFKQTDADVGSFDAGYGSAYLAKMVGQKNAREIFFLGRTYDAERMQQMGAVNIVAD CHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHCCCEEEEEC HGDLEKEAIQAAREINTKSPTAQRMLKFAFNLTDDGLMGQQVFAGEATRLAYMTDEAVEG CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCEEEEEECCHHCCH KEAFLEKREPNWNEFPYYY HHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SNYSTDNPFDPTQWATVPGFEEFTDITYHRHVGTTRADGIVRIAFDRPEVRNAFRPHTV CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHCCCCCCH DELYQALDHARRTPDVGTILLTGNGPSEKDGGWAFCSGGDQRIRGRSGYQYATEHARDDA HHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHCCCCC TADVSTVDIARTKVEGGRLHILEVQRLIRTMPKVVIAVVNGWAAGGGHSLHVVCDLTIAS CCCCEEEEHHHEECCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECC RQEARFKQTDADVGSFDAGYGSAYLAKMVGQKNAREIFFLGRTYDAERMQQMGAVNIVAD CHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHCCCEEEEEC HGDLEKEAIQAAREINTKSPTAQRMLKFAFNLTDDGLMGQQVFAGEATRLAYMTDEAVEG CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCEEEEEECCHHCCH KEAFLEKREPNWNEFPYYY HHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA