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The map label for this gene is yfiY [H]

Identifier: 62389234

GI number: 62389234

Start: 352694

End: 353641

Strand: Direct

Name: yfiY [H]

Synonym: cg0405

Alternate gene names: 62389234

Gene position: 352694-353641 (Clockwise)

Preceding gene: 62389226

Following gene: 62389242

Centisome position: 10.74

GC content: 50.53

Gene sequence:

>948_bases
ATGCATTTTTGTCTCCTGCCTCTGGCCAAACCTGCCAAAGTTGTGGCCCCGCTCCTCGGCGTCGCACTCCTTCTAAGCTC
CTGTTCTTCAACATCTTCCGATGAATCAATCCAACCTGAAGTTGCCAGCACTGGATATTCAGTGGAGCACGCAATGGGCA
CCACCGAAATCCCTGAAACCCCAACGCGTGTGGTCGTCATTGATTCCCCACACCTCGACGCACTTTTGGCTTTGGGAATT
ACTCCAGTCGGAGCTACGGAATCTGGATCCGAAAATGGTTTCCCCGCCTACTTGGCTGACGAGCTAAAAGACACCGAATC
TGTTGGGCTGACATCTGAGCCAAATTTGGAAAAGATCGCCGCACTGGATCCGGATTTGATCATTGGCGCAAAGGTCCGCC
ACGAGGCTATTTATGATCAGCTTTCAGACATCGCACCAACCGTGATGTCCGAAGGTTCCGGCACAAACTGGAATGAACAG
GCAGAAATCACTGCGGCAGCAGTAAACAAGTCTGATGAGATGGACAAACTGATCTCAGACTTGGACACCCGTGCCACAGA
GCTTGGTGAAGAGATCGGTGCTGACGGACAAACCGCTTCAATGGTTCGATTCCGCACGGACAACTTCAGGCTCTATGGTC
CCGAGACCTTCTCTGGTTCAGTTCTGGAACAAGTTGGATTTGACCTGGGGGAACGTGATTGGAATGAGTACTCCATGATG
GAGCTATCCTCAGAAAACTTTGGGCAGATCGATGGAGACCTTATTTTCTACACCATCCCAGGATCCCCTGAAGCAACCAC
TTATCCAAAGATTTCCGAACTGTGGGTTGATTCACCAGCAGTTCGGCAAGGTAGAACTTACGAGTTTGAAGACGAAACCT
GGATGGTCGGCATCGGTGTATTAGGTGCCAATGAAATCTTGGATGACCTGGAAGAAACTCTGAGCTAG

Upstream 100 bases:

>100_bases
TTAGGGGCCTGTAAGGCGAAACTTATTGCGGGGGTACGTCTTGGGGAAAGAGTTAAGGATAACCTTGCCTTAATTATTTG
AGTTACAGTAATTTAAGTGA

Downstream 100 bases:

>100_bases
TTTCCTTTAGGCCAAGCAACCCCTCGCCGTTGTCCCTCCGCATATTAGGAGAGTCTCGATGACGAGGGGTTCTTCTTATT
CGAAGAACTGTCTTCGAAGC

Product: cobalamin/Fe3+-siderophores transport system, component

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MHFCLLPLAKPAKVVAPLLGVALLLSSCSSTSSDESIQPEVASTGYSVEHAMGTTEIPETPTRVVVIDSPHLDALLALGI
TPVGATESGSENGFPAYLADELKDTESVGLTSEPNLEKIAALDPDLIIGAKVRHEAIYDQLSDIAPTVMSEGSGTNWNEQ
AEITAAAVNKSDEMDKLISDLDTRATELGEEIGADGQTASMVRFRTDNFRLYGPETFSGSVLEQVGFDLGERDWNEYSMM
ELSSENFGQIDGDLIFYTIPGSPEATTYPKISELWVDSPAVRQGRTYEFEDETWMVGIGVLGANEILDDLEETLS

Sequences:

>Translated_315_residues
MHFCLLPLAKPAKVVAPLLGVALLLSSCSSTSSDESIQPEVASTGYSVEHAMGTTEIPETPTRVVVIDSPHLDALLALGI
TPVGATESGSENGFPAYLADELKDTESVGLTSEPNLEKIAALDPDLIIGAKVRHEAIYDQLSDIAPTVMSEGSGTNWNEQ
AEITAAAVNKSDEMDKLISDLDTRATELGEEIGADGQTASMVRFRTDNFRLYGPETFSGSVLEQVGFDLGERDWNEYSMM
ELSSENFGQIDGDLIFYTIPGSPEATTYPKISELWVDSPAVRQGRTYEFEDETWMVGIGVLGANEILDDLEETLS
>Mature_315_residues
MHFCLLPLAKPAKVVAPLLGVALLLSSCSSTSSDESIQPEVASTGYSVEHAMGTTEIPETPTRVVVIDSPHLDALLALGI
TPVGATESGSENGFPAYLADELKDTESVGLTSEPNLEKIAALDPDLIIGAKVRHEAIYDQLSDIAPTVMSEGSGTNWNEQ
AEITAAAVNKSDEMDKLISDLDTRATELGEEIGADGQTASMVRFRTDNFRLYGPETFSGSVLEQVGFDLGERDWNEYSMM
ELSSENFGQIDGDLIFYTIPGSPEATTYPKISELWVDSPAVRQGRTYEFEDETWMVGIGVLGANEILDDLEETLS

Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen. Binds the siderophores and delivers them to the surface of yfiZ/yfhA (Probable) [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable). Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082411, Length=186, Percent_Identity=30.6451612903226, Blast_Score=92, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 33978; Mature: 33978

Theoretical pI: Translated: 3.81; Mature: 3.81

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFCLLPLAKPAKVVAPLLGVALLLSSCSSTSSDESIQPEVASTGYSVEHAMGTTEIPET
CCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHCCCCCCCCC
PTRVVVIDSPHLDALLALGITPVGATESGSENGFPAYLADELKDTESVGLTSEPNLEKIA
CCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCHHHCCCCCCCCHHHHH
ALDPDLIIGAKVRHEAIYDQLSDIAPTVMSEGSGTNWNEQAEITAAAVNKSDEMDKLISD
HCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHH
LDTRATELGEEIGADGQTASMVRFRTDNFRLYGPETFSGSVLEQVGFDLGERDWNEYSMM
HHHHHHHHHHHHCCCCCCEEEEEEECCCEEEECCCCCCCHHHHHHCCCCCCCCCCCHHHE
ELSSENFGQIDGDLIFYTIPGSPEATTYPKISELWVDSPAVRQGRTYEFEDETWMVGIGV
EECCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHCCCCHHHCCCCEEECCCEEEEEEEE
LGANEILDDLEETLS
CCHHHHHHHHHHHHC
>Mature Secondary Structure
MHFCLLPLAKPAKVVAPLLGVALLLSSCSSTSSDESIQPEVASTGYSVEHAMGTTEIPET
CCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHCCCCCCCCC
PTRVVVIDSPHLDALLALGITPVGATESGSENGFPAYLADELKDTESVGLTSEPNLEKIA
CCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCHHHCCCCCCCCHHHHH
ALDPDLIIGAKVRHEAIYDQLSDIAPTVMSEGSGTNWNEQAEITAAAVNKSDEMDKLISD
HCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHH
LDTRATELGEEIGADGQTASMVRFRTDNFRLYGPETFSGSVLEQVGFDLGERDWNEYSMM
HHHHHHHHHHHHCCCCCCEEEEEEECCCEEEECCCCCCCHHHHHHCCCCCCCCCCCHHHE
ELSSENFGQIDGDLIFYTIPGSPEATTYPKISELWVDSPAVRQGRTYEFEDETWMVGIGV
EECCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHCCCCHHHCCCCEEECCCEEEEEEEE
LGANEILDDLEETLS
CCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]