| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is bglS' [H]
Identifier: 62389215
GI number: 62389215
Start: 332920
End: 334566
Strand: Direct
Name: bglS' [H]
Synonym: cg0385
Alternate gene names: 62389215
Gene position: 332920-334566 (Clockwise)
Preceding gene: 62389214
Following gene: 62389216
Centisome position: 10.14
GC content: 56.22
Gene sequence:
>1647_bases ATGTCTCAAGAGCGGCCTCAAATCGGCTCCCGCCTCTCTCGTGTCATTGAACAAGACGGCCTACAATTCCGCGATCTCGA CGGCGACGGCGTACTTGCACCTTATGAAGATTGGCGTCTAACCCCAGCAGAGCGTGCCGCTGACCTGGTGAAACGTATGA ATGTGGAAGAAAAAGCGGGCCTGATGATCATCGGTTCGCACTACCCCGGATACTCGCCTTTGGCGCCGGAGAGTGAAGGC AAAGACGCGGAAAAGTGCGAGCCTTTGCTGAACCCTGTCGATATGTGGCGTGAGGATAACCCGATCACGGGTGTTCCTTT CACCGAGCCTGTGCTGGCAACTTCTTCCACTGAAAATGCCATTAACCTGCGCAATCAGCGTTACTTAATTGTTCGTGACA ACCTGCCAGCTCGTGGGCTTGCTACTTGGACCAATGCTGTTCAGGAAGTCGCGGAGCGATCCCGTTTGGGTATTCCTGTT GCGTTTGCGTCGAATCCTCGTAACCACGTCGCGCTCGTTGCGCAGTTCGGTGTGAACGAGTCCGCGGGTGTGTTCTCTGA GTGGCCTGGCGAGCTGGGTCTTGCTGCGCTTCGCGATGCTGAACTGATGGAGACTTTCGGTACCGAGGCTGCTAAAGAAT GGCGTGCCGGTGGTGTGCACAAGCTGTACGGTTACATGGCTGACCTCGCTTCTGAGCCTCGTTGGTCCCGCTTCAACGGT ACTTTTGGTGAGGATCCGGAGTTGATCTCTGATTACATCGCTGCTGTTGTGCGTGGTTTGCAGGGCCCTGAGCTGTCCAA GAATTCCGTGTCGACCACCATTAAGCACTTCCCAGGTGGCGGCGTGCGCCTCGACGGCCACGATCCTCACTTCCACTGGG GTCAGACCAATGAGTACCCAACCGAAGATGCGCTGGGCAAGTACCATCTGCCTCCTTTCCAGGCAGCTATCGACGCTGGC TGCGCCTCGATCATGCCTTACTACGCACGGCCAATGAACAACTCCGCCAACCAGCTCGATCAGCAGCTGTGGCAAAACCC GACCACGCAGTTCGAAGAGGTTGCGTTTGCCTACAACCGCACCTTCATTCAGGATTTGCTTCGCGACGCCATGGGCCACC GTGGGTACGTCAACTCCGACTCCGGCGTCATCGACGCCATGATGTGGGGCGTGGAGGAACTCAGCGAGCCAGAACGCTTC GCCGCAGCAGTGCGTGCAGGCACCGACATTTTCTCCGACATGGCTAACCCACGTCGACTGCTCGAAGCAGTTGCTGAGGG ACACCTTGATGAGTCAGAGCTGAATCAGCCAGTCCAGCGACTCCTGGAGGAAATCTTCCAGCTTGGTCTGTTTGAGAACC CATATGTCTCTGAAGATGAAGCAGAAAAGATCATTGGTGCGCCAGAGGTTTCTGCATTGGGCAACAAAGCACAGCTTGAT TCCGTCACCTTGCTGCGTAACAACCCCATCCGTGCTGCCACTGGATCCTGCAGCAAGCCTGAAGATCTACCCATTGGTTA CTGGCCGTACCAAGATCGACGAGGTTCAACTACAGCTGGAAGCAGCCATTCGCGCAGAACTCCCAGGGGTAACCTTGGTG TCTTCCGAGTCAGAAGCAGATCTTGCAATCGTGTGGGCTCGCCCTGA
Upstream 100 bases:
>100_bases TTGTCTAACCCCGTATAGGTGAGAAATGTTGGACAAGTGTCTGTTTTTTGTGGGGGAAATCTGACTACGATGGTAAGAAA TAAGGAAAGAGATTACCATT
Downstream 100 bases:
>100_bases AATTGCACTGTTTGAAGATGACCTCGAAGGTGTTTCCCTCTCTGTTGACCCTCGTGCCAATGGTGTCGATGTGGAACGCG TTCAGGCTGTGGAAGCTGCA
Product: beta-glucosidase N-terminal domain-containing protein
Products: NA
Alternate protein names: Beta-glucosidase; Cellobiase; Gentiobiase; Beta-xylosidase; 1,4-beta-D-xylan xylohydrolase; Xylan 1,4-beta-xylosidase [H]
Number of amino acids: Translated: 548; Mature: 547
Protein sequence:
>548_residues MSQERPQIGSRLSRVIEQDGLQFRDLDGDGVLAPYEDWRLTPAERAADLVKRMNVEEKAGLMIIGSHYPGYSPLAPESEG KDAEKCEPLLNPVDMWREDNPITGVPFTEPVLATSSTENAINLRNQRYLIVRDNLPARGLATWTNAVQEVAERSRLGIPV AFASNPRNHVALVAQFGVNESAGVFSEWPGELGLAALRDAELMETFGTEAAKEWRAGGVHKLYGYMADLASEPRWSRFNG TFGEDPELISDYIAAVVRGLQGPELSKNSVSTTIKHFPGGGVRLDGHDPHFHWGQTNEYPTEDALGKYHLPPFQAAIDAG CASIMPYYARPMNNSANQLDQQLWQNPTTQFEEVAFAYNRTFIQDLLRDAMGHRGYVNSDSGVIDAMMWGVEELSEPERF AAAVRAGTDIFSDMANPRRLLEAVAEGHLDESELNQPVQRLLEEIFQLGLFENPYVSEDEAEKIIGAPEVSALGNKAQLD SVTLLRNNPIRAATGSCSKPEDLPIGYWPYQDRRGSTTAGSSHSRRTPRGNLGVFRVRSRSCNRVGSP
Sequences:
>Translated_548_residues MSQERPQIGSRLSRVIEQDGLQFRDLDGDGVLAPYEDWRLTPAERAADLVKRMNVEEKAGLMIIGSHYPGYSPLAPESEG KDAEKCEPLLNPVDMWREDNPITGVPFTEPVLATSSTENAINLRNQRYLIVRDNLPARGLATWTNAVQEVAERSRLGIPV AFASNPRNHVALVAQFGVNESAGVFSEWPGELGLAALRDAELMETFGTEAAKEWRAGGVHKLYGYMADLASEPRWSRFNG TFGEDPELISDYIAAVVRGLQGPELSKNSVSTTIKHFPGGGVRLDGHDPHFHWGQTNEYPTEDALGKYHLPPFQAAIDAG CASIMPYYARPMNNSANQLDQQLWQNPTTQFEEVAFAYNRTFIQDLLRDAMGHRGYVNSDSGVIDAMMWGVEELSEPERF AAAVRAGTDIFSDMANPRRLLEAVAEGHLDESELNQPVQRLLEEIFQLGLFENPYVSEDEAEKIIGAPEVSALGNKAQLD SVTLLRNNPIRAATGSCSKPEDLPIGYWPYQDRRGSTTAGSSHSRRTPRGNLGVFRVRSRSCNRVGSP >Mature_547_residues SQERPQIGSRLSRVIEQDGLQFRDLDGDGVLAPYEDWRLTPAERAADLVKRMNVEEKAGLMIIGSHYPGYSPLAPESEGK DAEKCEPLLNPVDMWREDNPITGVPFTEPVLATSSTENAINLRNQRYLIVRDNLPARGLATWTNAVQEVAERSRLGIPVA FASNPRNHVALVAQFGVNESAGVFSEWPGELGLAALRDAELMETFGTEAAKEWRAGGVHKLYGYMADLASEPRWSRFNGT FGEDPELISDYIAAVVRGLQGPELSKNSVSTTIKHFPGGGVRLDGHDPHFHWGQTNEYPTEDALGKYHLPPFQAAIDAGC ASIMPYYARPMNNSANQLDQQLWQNPTTQFEEVAFAYNRTFIQDLLRDAMGHRGYVNSDSGVIDAMMWGVEELSEPERFA AAVRAGTDIFSDMANPRRLLEAVAEGHLDESELNQPVQRLLEEIFQLGLFENPYVSEDEAEKIIGAPEVSALGNKAQLDS VTLLRNNPIRAATGSCSKPEDLPIGYWPYQDRRGSTTAGSSHSRRTPRGNLGVFRVRSRSCNRVGSP
Specific function: Exhibits both beta-glucosidase and beta-xylosidase activities [H]
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=313, Percent_Identity=26.8370607028754, Blast_Score=96, Evalue=8e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21; =3.2.1.37 [H]
Molecular weight: Translated: 60614; Mature: 60483
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQERPQIGSRLSRVIEQDGLQFRDLDGDGVLAPYEDWRLTPAERAADLVKRMNVEEKAG CCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCC LMIIGSHYPGYSPLAPESEGKDAEKCEPLLNPVDMWREDNPITGVPFTEPVLATSSTENA EEEEECCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHCCCCCCCCCCCCCCCEECCCCCCC INLRNQRYLIVRDNLPARGLATWTNAVQEVAERSRLGIPVAFASNPRNHVALVAQFGVNE EEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEECCCCC SAGVFSEWPGELGLAALRDAELMETFGTEAAKEWRAGGVHKLYGYMADLASEPRWSRFNG CCCCHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCC TFGEDPELISDYIAAVVRGLQGPELSKNSVSTTIKHFPGGGVRLDGHDPHFHWGQTNEYP CCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCC TEDALGKYHLPPFQAAIDAGCASIMPYYARPMNNSANQLDQQLWQNPTTQFEEVAFAYNR CHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH TFIQDLLRDAMGHRGYVNSDSGVIDAMMWGVEELSEPERFAAAVRAGTDIFSDMANPRRL HHHHHHHHHHHCCCCCCCCCCCHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHCCCHHHH LEAVAEGHLDESELNQPVQRLLEEIFQLGLFENPYVSEDEAEKIIGAPEVSALGNKAQLD HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCHHHCCCCHHCC SVTLLRNNPIRAATGSCSKPEDLPIGYWPYQDRRGSTTAGSSHSRRTPRGNLGVFRVRSR CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC SCNRVGSP CCCCCCCC >Mature Secondary Structure SQERPQIGSRLSRVIEQDGLQFRDLDGDGVLAPYEDWRLTPAERAADLVKRMNVEEKAG CCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCC LMIIGSHYPGYSPLAPESEGKDAEKCEPLLNPVDMWREDNPITGVPFTEPVLATSSTENA EEEEECCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHCCCCCCCCCCCCCCCEECCCCCCC INLRNQRYLIVRDNLPARGLATWTNAVQEVAERSRLGIPVAFASNPRNHVALVAQFGVNE EEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEECCCCC SAGVFSEWPGELGLAALRDAELMETFGTEAAKEWRAGGVHKLYGYMADLASEPRWSRFNG CCCCHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCC TFGEDPELISDYIAAVVRGLQGPELSKNSVSTTIKHFPGGGVRLDGHDPHFHWGQTNEYP CCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCC TEDALGKYHLPPFQAAIDAGCASIMPYYARPMNNSANQLDQQLWQNPTTQFEEVAFAYNR CHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH TFIQDLLRDAMGHRGYVNSDSGVIDAMMWGVEELSEPERFAAAVRAGTDIFSDMANPRRL HHHHHHHHHHHCCCCCCCCCCCHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHCCCHHHH LEAVAEGHLDESELNQPVQRLLEEIFQLGLFENPYVSEDEAEKIIGAPEVSALGNKAQLD HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCHHHCCCCHHCC SVTLLRNNPIRAATGSCSKPEDLPIGYWPYQDRRGSTTAGSSHSRRTPRGNLGVFRVRSR CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC SCNRVGSP CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7891660 [H]