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The map label for this gene is hofB [C]

Identifier: 62389198

GI number: 62389198

Start: 316002

End: 317135

Strand: Direct

Name: hofB [C]

Synonym: cg0363

Alternate gene names: 62389198

Gene position: 316002-317135 (Clockwise)

Preceding gene: 62389197

Following gene: 62389199

Centisome position: 9.63

GC content: 58.73

Gene sequence:

>1134_bases
ATGACTGACATTGATCTGGTGGTGGAAAACGTCCAAAGGATTATCGCCACCAAAGAGACACCGCCGACCTCTGCGGAAAT
AGCGAGCCTGATTCGGGAACAAGCAGGCGTGATCAGTAACGAGGACATCGTGATGGTGTTGCGTCGACTGCGCAGTGATT
CTGTGGGCGTGGGACCGTTGGAATCTCTGCTTGCGCTTCCTGGCGTGACGGATGTGTTGGTTAATGCCCATGACAGCGTG
TGGATTGATCGCGGTCAGGGCGTGGAGAAAGTCGACATGGATCTGGGCTCAGAGGAGGCGGTGCGTCGCCTTGCCACCCG
GTTGGCGTTGACCTGTGGCAGACGCTTAGATGATGCGCAGCCTTTCGCTGATGGCCGAATCACCAGGGACGACGGCAGCG
TGTTGCGCATTCACGCGGTGTTGGCACCCTTGGCGGAATCCGGCACGTGCATCAGTGTGCGAGTACTGCGTCAAGCACGG
CTGAGCCTTGATGATCTTATCCAAAGCGGCACGGTGCCTGAGGACATCGCGCCTGCGCTCCGGAACATCATCAATCAACG
GCGCTCGTTCCTTGTTGTCGGTGGCACCGGCACAGGGAAAACCACATTGCTGTCCGCGATGCTCACCGAAGTTCCCGCTG
ATCAACGAATCATCTGCATCGAGGACACCGCAGAGCTTCATCCCGGCCATCCAAGCACCATCAACTTGGTGTCTCGCCAA
GCAAACGTCGAGGGCGCCGGCGCCGTGAGCATGGCGGATTTGTTGAAACAATCGCTGCGCATGAGGCCTGACCGGATTGT
CGTCGGAGAGATTCGCGGTGCGGAAGTCGTGGATCTTTTGGCTGCGATGAATACCGGACACGACGGCGGTGCTGGCACCA
TTCACGCGAACTCCATCTCTGAAGTTCCCGCGCGCATGGAAGCTCTTGCGGCGACCGGCGGATTGGACCGCATGGCATTG
CATTCTCAACTCGCGGCCGCAGTGGACATTGTGCTGGTCATGAAACACACCCCTTTTGGCCGCAGGCTAGCTCAACTCGG
GGTGCTCCGCGGAAATCCTGTGACCACGCAGGTGGTGTGGGATTTGGACCACGGCATGCACGAAGGGAGCGAAGAGGCAT
GGTTTATGCCCTAG

Upstream 100 bases:

>100_bases
TCCAGCGGCTGGCTAAGTCCGTGGAGATGCATGGGCTGACCGGTTCTTTGCCGAGGGTTTTAAGCTCAGCATGCGACGCG
GTCCTCGGGGAGGTGGCGGC

Downstream 100 bases:

>100_bases
GCCTTCTTAGCGTGGCGGTGTTGATCTCTGGTTCAAGGGGCCCCGGCGCGCGTACCAGGCCACCAACACCTGGGAATGGC
GTCCATCTATTCGCCCTAAT

Product: secretion ATPase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MTDIDLVVENVQRIIATKETPPTSAEIASLIREQAGVISNEDIVMVLRRLRSDSVGVGPLESLLALPGVTDVLVNAHDSV
WIDRGQGVEKVDMDLGSEEAVRRLATRLALTCGRRLDDAQPFADGRITRDDGSVLRIHAVLAPLAESGTCISVRVLRQAR
LSLDDLIQSGTVPEDIAPALRNIINQRRSFLVVGGTGTGKTTLLSAMLTEVPADQRIICIEDTAELHPGHPSTINLVSRQ
ANVEGAGAVSMADLLKQSLRMRPDRIVVGEIRGAEVVDLLAAMNTGHDGGAGTIHANSISEVPARMEALAATGGLDRMAL
HSQLAAAVDIVLVMKHTPFGRRLAQLGVLRGNPVTTQVVWDLDHGMHEGSEEAWFMP

Sequences:

>Translated_377_residues
MTDIDLVVENVQRIIATKETPPTSAEIASLIREQAGVISNEDIVMVLRRLRSDSVGVGPLESLLALPGVTDVLVNAHDSV
WIDRGQGVEKVDMDLGSEEAVRRLATRLALTCGRRLDDAQPFADGRITRDDGSVLRIHAVLAPLAESGTCISVRVLRQAR
LSLDDLIQSGTVPEDIAPALRNIINQRRSFLVVGGTGTGKTTLLSAMLTEVPADQRIICIEDTAELHPGHPSTINLVSRQ
ANVEGAGAVSMADLLKQSLRMRPDRIVVGEIRGAEVVDLLAAMNTGHDGGAGTIHANSISEVPARMEALAATGGLDRMAL
HSQLAAAVDIVLVMKHTPFGRRLAQLGVLRGNPVTTQVVWDLDHGMHEGSEEAWFMP
>Mature_376_residues
TDIDLVVENVQRIIATKETPPTSAEIASLIREQAGVISNEDIVMVLRRLRSDSVGVGPLESLLALPGVTDVLVNAHDSVW
IDRGQGVEKVDMDLGSEEAVRRLATRLALTCGRRLDDAQPFADGRITRDDGSVLRIHAVLAPLAESGTCISVRVLRQARL
SLDDLIQSGTVPEDIAPALRNIINQRRSFLVVGGTGTGKTTLLSAMLTEVPADQRIICIEDTAELHPGHPSTINLVSRQA
NVEGAGAVSMADLLKQSLRMRPDRIVVGEIRGAEVVDLLAAMNTGHDGGAGTIHANSISEVPARMEALAATGGLDRMALH
SQLAAAVDIVLVMKHTPFGRRLAQLGVLRGNPVTTQVVWDLDHGMHEGSEEAWFMP

Specific function: Unknown

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022399
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 40374; Mature: 40243

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDIDLVVENVQRIIATKETPPTSAEIASLIREQAGVISNEDIVMVLRRLRSDSVGVGPL
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHH
ESLLALPGVTDVLVNAHDSVWIDRGQGVEKVDMDLGSEEAVRRLATRLALTCGRRLDDAQ
HHHHHCCCHHHHHHCCCCCEEEECCCCCEEHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC
PFADGRITRDDGSVLRIHAVLAPLAESGTCISVRVLRQARLSLDDLIQSGTVPEDIAPAL
CCCCCEEECCCCCEEEHHHHHHHHHCCCCEEHHHHHHHHHCCHHHHHHCCCCCHHHHHHH
RNIINQRRSFLVVGGTGTGKTTLLSAMLTEVPADQRIICIEDTAELHPGHPSTINLVSRQ
HHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHH
ANVEGAGAVSMADLLKQSLRMRPDRIVVGEIRGAEVVDLLAAMNTGHDGGAGTIHANSIS
CCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCHH
EVPARMEALAATGGLDRMALHSQLAAAVDIVLVMKHTPFGRRLAQLGVLRGNPVTTQVVW
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHCCCCCCCCEEEEEE
DLDHGMHEGSEEAWFMP
ECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TDIDLVVENVQRIIATKETPPTSAEIASLIREQAGVISNEDIVMVLRRLRSDSVGVGPL
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHH
ESLLALPGVTDVLVNAHDSVWIDRGQGVEKVDMDLGSEEAVRRLATRLALTCGRRLDDAQ
HHHHHCCCHHHHHHCCCCCEEEECCCCCEEHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC
PFADGRITRDDGSVLRIHAVLAPLAESGTCISVRVLRQARLSLDDLIQSGTVPEDIAPAL
CCCCCEEECCCCCEEEHHHHHHHHHCCCCEEHHHHHHHHHCCHHHHHHCCCCCHHHHHHH
RNIINQRRSFLVVGGTGTGKTTLLSAMLTEVPADQRIICIEDTAELHPGHPSTINLVSRQ
HHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHH
ANVEGAGAVSMADLLKQSLRMRPDRIVVGEIRGAEVVDLLAAMNTGHDGGAGTIHANSIS
CCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCHH
EVPARMEALAATGGLDRMALHSQLAAAVDIVLVMKHTPFGRRLAQLGVLRGNPVTTQVVW
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHCCCCCCCCEEEEEE
DLDHGMHEGSEEAWFMP
ECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12218036; 9634230 [H]