Click here to switch to the map view.

The map label for this gene is yjgF [C]

Identifier: 62389179

GI number: 62389179

Start: 297792

End: 298253

Strand: Direct

Name: yjgF [C]

Synonym: cg0339

Alternate gene names: 62389179

Gene position: 297792-298253 (Clockwise)

Preceding gene: 62389178

Following gene: 62389183

Centisome position: 9.07

GC content: 56.93

Gene sequence:

>462_bases
ATGGCTTCTAATTCCGAACGCCTTGCAGAGCTGGGCATTTCTCTTCCTTCCGTTGCAGCGCCTGTTGCTGCGTATGTTCC
TGCGATTCAGACCGGTAACCAGGTGTGGACTTCTGGTCAGCTGCCTTTCGTTGATGGTCAGCTTCCGGCCACCGGCAAGG
TTGGCGCTGAGGTTTCCGCTGAGGATGCGGAGAAGTTGGCTCGTGCGGCTGCGCTAAACGCTCTTGCTGCGATTGATGCG
CTTGTTGGCATTGATAAGGTCACTCGCGTTTTGAAGATTGTTGGTTTCGTGGCGTCTGCTGATGATTTCAGTGGTCAGCC
TGCTGTCGTCAACGGTGCTTCCAATTTGATGGGTGAGGTTTTCGGCGAGGCTGGGGCGCATGCGCGTTCTGCTGTGGGCG
TGGCGGAGTTGCCGCTCAACTCGCCTGTCGAGGTCGAGGTTATCGTCGAGATCGCGCAGTAG

Upstream 100 bases:

>100_bases
ATACTTGGGGTGAGGACGGCTGGGAGTTGGTCTCGGTCATGCCTGGTATGAACCCTGAGAACCTCGTTGCTTACATGAAG
CGTGAGGTGGCTTAGTTCTT

Downstream 100 bases:

>100_bases
CACGCTTTTCGACGCAAAATGCCGGTTCCGCACTTCGTGCGAAACCGGCATTTTTAAATTGACCCTATCGTCCCCTTAGT
GTTCGTAAGTAGAAAGATCG

Product: translation initiation inhibitor

Products: NA

Alternate protein names: Translation Initiation Inhibitor; Endoribonuclease L-PSP Family Protein; Translation Initiation Inhibitor YjgF Family; Endoribonuclease L-Psp; Endoribonuclease; Endoribonuclease L-PSP Superfamily; Translation Initiation Inhibitor Protein; L-PSP Family Endoribonuclease; Transcription Regulator; Endoribonuclease Family Protein; Endoribonuclease L-PSP Family; YjgF Family Translation Initiation Inhibitor; Transcriptional Regulator; 2-Aminomuconate Deaminase; YjgF-Family Protein; Endoribonuclease-L-PSP Family Protein; Creatininase; Translation Initiation Inhibitor YjgF

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MASNSERLAELGISLPSVAAPVAAYVPAIQTGNQVWTSGQLPFVDGQLPATGKVGAEVSAEDAEKLARAAALNALAAIDA
LVGIDKVTRVLKIVGFVASADDFSGQPAVVNGASNLMGEVFGEAGAHARSAVGVAELPLNSPVEVEVIVEIAQ

Sequences:

>Translated_153_residues
MASNSERLAELGISLPSVAAPVAAYVPAIQTGNQVWTSGQLPFVDGQLPATGKVGAEVSAEDAEKLARAAALNALAAIDA
LVGIDKVTRVLKIVGFVASADDFSGQPAVVNGASNLMGEVFGEAGAHARSAVGVAELPLNSPVEVEVIVEIAQ
>Mature_152_residues
ASNSERLAELGISLPSVAAPVAAYVPAIQTGNQVWTSGQLPFVDGQLPATGKVGAEVSAEDAEKLARAAALNALAAIDAL
VGIDKVTRVLKIVGFVASADDFSGQPAVVNGASNLMGEVFGEAGAHARSAVGVAELPLNSPVEVEVIVEIAQ

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 1320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15402; Mature: 15270

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: PS00101 HEXAPEP_TRANSFERASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASNSERLAELGISLPSVAAPVAAYVPAIQTGNQVWTSGQLPFVDGQLPATGKVGAEVSA
CCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCH
EDAEKLARAAALNALAAIDALVGIDKVTRVLKIVGFVASADDFSGQPAVVNGASNLMGEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHH
FGEAGAHARSAVGVAELPLNSPVEVEVIVEIAQ
HHHCCCHHHHHCCCEECCCCCCCEEEEEEEECC
>Mature Secondary Structure 
ASNSERLAELGISLPSVAAPVAAYVPAIQTGNQVWTSGQLPFVDGQLPATGKVGAEVSA
CCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCH
EDAEKLARAAALNALAAIDALVGIDKVTRVLKIVGFVASADDFSGQPAVVNGASNLMGEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHH
FGEAGAHARSAVGVAELPLNSPVEVEVIVEIAQ
HHHCCCHHHHHCCCEECCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA