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The map label for this gene is recR [H]

Identifier: 62389142

GI number: 62389142

Start: 261403

End: 262059

Strand: Direct

Name: recR [H]

Synonym: cg0298

Alternate gene names: 62389142

Gene position: 261403-262059 (Clockwise)

Preceding gene: 62389141

Following gene: 62389148

Centisome position: 7.96

GC content: 60.12

Gene sequence:

>657_bases
GTGTTTGAAGGCCCACTCCAGGATCTCATCGACGAACTTTCTCGTCTCCCCGGCGTCGGCCCCAAAAGTGCCCAACGCAT
CGCATTTCACCTGCTCAACGTAGATCCTTCCGACATTACCCGCCTTCAGGAAGCCCTCGGAGGCGTGCGTGATGGCGTCC
AATTCTGCCGCATCTGCTGCAACATTTCCCGCGAAGAAGTCTGTCGCATCTGCTCCGACTCCGGACGTGACGGCGGAACA
ATCTGTGTCGTCGAAGAACCAAAAGACATCCAAGTTATCGAGCGCACCGGCGAATTCTCCGGCCGCTACCACGTCCTCGG
CGGCGCCCTCGACCCGCTGGCCAACATCGGCCCCCGCGAACTCAACATTTCCACGCTCCTGCAGCGCATCGGCGGCGTCC
TGCCAGACCGTGAGCTCGCAGATTCCACGCCTGAAAATAAGCTTTTCGACGCCACCCCCACCGTCCGCGAAGTCATCCTC
GCAACAGACCCCAACACCGAAGGCGAAGCCACCGCCTCATACCTCGGCCGCCTCTTGAAAGACTTCCCAGATCTGGTAAT
TTCCCGCCTCGCATCCGGAATGCCACTAGGCGGCGACCTCGAATTCGTCGACGAACTCACTCTCTCCCGAGCATTGAGTG
GCCGCCTGCAGATCTAG

Upstream 100 bases:

>100_bases
GTTGCTAAACGCAGGGCCGGGTTCTCGATGAACCCGGCTTTTGTCATGTATGCGATACTGTTCCTTGTCCAATTTTTAGT
TCAGATAGGTAGTGTAAGAC

Downstream 100 bases:

>100_bases
CCCCTCCTTTACAGGCTGGCTTTTGATCGAAGTGGCCCGTTTAACGGTCGAGCTTGCCCTGCTTCGCGCGCCGGGTGTAA
ACAACAAGGCGAACTGCCGC

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MFEGPLQDLIDELSRLPGVGPKSAQRIAFHLLNVDPSDITRLQEALGGVRDGVQFCRICCNISREEVCRICSDSGRDGGT
ICVVEEPKDIQVIERTGEFSGRYHVLGGALDPLANIGPRELNISTLLQRIGGVLPDRELADSTPENKLFDATPTVREVIL
ATDPNTEGEATASYLGRLLKDFPDLVISRLASGMPLGGDLEFVDELTLSRALSGRLQI

Sequences:

>Translated_218_residues
MFEGPLQDLIDELSRLPGVGPKSAQRIAFHLLNVDPSDITRLQEALGGVRDGVQFCRICCNISREEVCRICSDSGRDGGT
ICVVEEPKDIQVIERTGEFSGRYHVLGGALDPLANIGPRELNISTLLQRIGGVLPDRELADSTPENKLFDATPTVREVIL
ATDPNTEGEATASYLGRLLKDFPDLVISRLASGMPLGGDLEFVDELTLSRALSGRLQI
>Mature_218_residues
MFEGPLQDLIDELSRLPGVGPKSAQRIAFHLLNVDPSDITRLQEALGGVRDGVQFCRICCNISREEVCRICSDSGRDGGT
ICVVEEPKDIQVIERTGEFSGRYHVLGGALDPLANIGPRELNISTLLQRIGGVLPDRELADSTPENKLFDATPTVREVIL
ATDPNTEGEATASYLGRLLKDFPDLVISRLASGMPLGGDLEFVDELTLSRALSGRLQI

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1786678, Length=214, Percent_Identity=45.7943925233645, Blast_Score=166, Evalue=1e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967 [H]

Pfam domain/function: PF02132 RecR; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 23656; Mature: 23656

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEGPLQDLIDELSRLPGVGPKSAQRIAFHLLNVDPSDITRLQEALGGVRDGVQFCRICC
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NISREEVCRICSDSGRDGGTICVVEEPKDIQVIERTGEFSGRYHVLGGALDPLANIGPRE
CCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHCCCCCCCEEECCCCHHHHHCCCCCC
LNISTLLQRIGGVLPDRELADSTPENKLFDATPTVREVILATDPNTEGEATASYLGRLLK
CCHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCHHHHHEEEECCCCCCCHHHHHHHHHHHH
DFPDLVISRLASGMPLGGDLEFVDELTLSRALSGRLQI
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFEGPLQDLIDELSRLPGVGPKSAQRIAFHLLNVDPSDITRLQEALGGVRDGVQFCRICC
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NISREEVCRICSDSGRDGGTICVVEEPKDIQVIERTGEFSGRYHVLGGALDPLANIGPRE
CCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHCCCCCCCEEECCCCHHHHHCCCCCC
LNISTLLQRIGGVLPDRELADSTPENKLFDATPTVREVILATDPNTEGEATASYLGRLLK
CCHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCHHHHHEEEECCCCCCCHHHHHHHHHHHH
DFPDLVISRLASGMPLGGDLEFVDELTLSRALSGRLQI
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA