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The map label for this gene is ydfJ [H]

Identifier: 62389129

GI number: 62389129

Start: 244903

End: 247308

Strand: Direct

Name: ydfJ [H]

Synonym: cg0284

Alternate gene names: 62389129

Gene position: 244903-247308 (Clockwise)

Preceding gene: 62389128

Following gene: 62389130

Centisome position: 7.46

GC content: 53.7

Gene sequence:

>2406_bases
GTGGCGAAATTGCTATTCAGGTTGGGGCGATGGTCCTATAATCGCAAGTGGATTGTGATTTCGGCATGGCTACTTATTTT
GGCCATTGTTGGTGGTCTGGCCCTGACGATGCAGAAGGGGTTCAGTAACTCTTTCACTATTGAAGACACCCCTTCGATTG
ATGCCACTGTTTCTCTGGTTGAAAATTTCCCTGATCAGACGAACCCGGTGACGGCCGCCGGAGTTAACGTGGTTTTCCAA
TCCCCGGAAGGAACCACGCTTGATGATCCTCAGATGATGACTGCGATGGATGCAGTCGTTGATTACATTGAGGACAATTT
GCCTGATTTTGGTGGGGGAGAGCGCTTCGGCAATCCTGTTGAGGTGTCTCCTGCGTTGGAAGAGATGGTCATCGAGCAGA
TGACCAGCATGGGGCTTCCTGAGGAAACCGCTGCAAAGGATGCTGCCAATCTGGCGGTGTTGAGCGAAGACAAAACCATT
GGCTACACCTCTTTCAACATTGATGTTGAGGCCGCAGAATATGTGGAGCAAAAACACCGCGATGTGATCAACGAAGCGAT
GCAAATCGGTGAAGATTTAGGTGTCCGGGTGGAAGCCGGTGGACCTGCTTTCGGTGATCCAATTCAGATTGAAACCACCA
GTGAGATCATCGGTATTGGCATCGCGTTCATCGTGTTGATTTTCACCTTTGGTTCTTTGATTGCTGCAGGCTTGCCTTTG
ATTACCGCGGTGATCGGCGTGGGCATTGGTGCGCTGGCAATTGTGCTGGCCACGGCGTTTACTGATCTCAACAATGTGAC
TCCAGTGCTCGCAGTGATGATTGGCCTGGCCGTGGGCATTGACTACGCGCTGTTTATTTTGTCTAGGTACCGTGCGGAGT
ATAAGCGCATGCCACGTGCCGATGCTGCCGGAATGGCGGTGGGCACAGCTGGTAGTGCGGTGGTGTTTGCTGGCGCGACG
GTGATTATCGCGCTGGTAGCCCTCATCATTGCGGATATCGGATTCCTCACGGCCATGGGTATTTCTGCGGCGTTTACGGT
GTTCGTGGCTGTGCTCATTGCGTTGACGTTTATCCCGGCGCTGTTGGGTGTGTTTGGTGGTCATGCGTTCAAGGGCAAGA
TCCCTGGAATTGGTGGAAACCCAACGCCAAAGCAGACGTGGGAGCAAGCGCTTAATCGTCGTTCCAAGGGTCGCTCATGG
GTCAAGCTTGTACAGAAAGCACCGGGTCTTGTGGTGGCAGTGGTGGTCTTGGGTCTTGGTGCCTTGACCATTCCTGCAAT
GAACCTGCAGTTGTCACTGCCTTCTGACTCCACCTCCAATATTGATACCACTCAGCGTCAGTCGGCTGATTTGATGGCAG
AGGGCTTTGGCGCGGGCGTTAATGCGCCGTTCTTGGTCATCGTCGATACGCATGAGGTCAATGCTGATTCCACCGCATTG
CAGCCACTGATTGAGGCACAGGAGCCTGAAGAGGGCGAGTTCGATCGGGAGCAGGCGGCTCGTTTTGCTACCTATATGTA
TGTCACCCAGACCTACAATTCCAACATCGATGTGAAGAATGCGCAGATCATCAGCGTCAATGATGATTTCACTGCGGCGC
AGATTCTCGTGACTCCATACACCGGACCTGCGGATAAAGAGACCCCTGAGTTGATGCACGTGCTGCGTGCGCAGGAAGCT
CAGATTGAGGATGTTACGGGAACTGAACTGGGTACCACTGGGTTTACGGCGGTTCAGTTGGACATTACTGAGCAGCTGGA
AGACGCAATGCCGGTTTACCTCGCTGTGGTTGTTGGTTTGGCTATTTTCCTCCTCATTCTGGTGTTCCGTTCCCTGCTTG
TTCCGCTGGTTGCTGGCCTTGGCTTCTTGTTGTCTGTGGGTGCGGCCTTCGGTGCGACGGTGTTGGTCTGGCAGGAGGGC
TTCGGTGGCTTTGTGAACACCCCTGGTCCGCTGATTTCCTTCATGCCGATCTTCCTCATCGGCGTGACCTTCGGTTTGGC
CATGGACTATCAGGTGTTCCTTGTGACTCGCATGCGCGAGCACTACACCCACCACAATGGCAAGGGACAGCCTGGTTCCA
AGTACACCCCGGTTGAGCAGTCAGTGATTGAAGGCTTCACGCAGGGCTCCCGCGTGGTTACAGCAGCGGCACTGATCATG
ATTGCCGTGTTCGTGGCGTTTATTGATCAGCCGTTGCCATTTATTAAGATCTTCGGTTTCGCGTTGGGTGCGGGCGTGTT
TTTCGATGCTTTCTTCATTCGCATGGGTCTGGTCCCCGCGTCGATGTTCCTGATGGGCAAGGCCACGTGGTGGATGCCTA
AGTGGCTGGATCGAATTCTGCCAAGTTTGGACATTGAAGGCACCGCACTGGAGAAGGAATGGGAGGAGAAGCAGGCTGCA
CGTTAG

Upstream 100 bases:

>100_bases
AAGAAGCGTCGGATCTAGGAGATTTTCTCGGATTCACAGCTACCGCAGGTAAGTTAGTGGGGCGTGAAAAAATAGCTCAT
TTAAGAGGAGAAGCAACCCC

Downstream 100 bases:

>100_bases
ACTTGGCACCTATGTCAGATCTTTCATTCACCCTCAACAACAAGCTTGCCGATGACGCCCCCGGCAAGCATGGTCGTACA
GGTGTAATCCACACACCTCA

Product: RND superfamily drug efflux protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 801; Mature: 800

Protein sequence:

>801_residues
MAKLLFRLGRWSYNRKWIVISAWLLILAIVGGLALTMQKGFSNSFTIEDTPSIDATVSLVENFPDQTNPVTAAGVNVVFQ
SPEGTTLDDPQMMTAMDAVVDYIEDNLPDFGGGERFGNPVEVSPALEEMVIEQMTSMGLPEETAAKDAANLAVLSEDKTI
GYTSFNIDVEAAEYVEQKHRDVINEAMQIGEDLGVRVEAGGPAFGDPIQIETTSEIIGIGIAFIVLIFTFGSLIAAGLPL
ITAVIGVGIGALAIVLATAFTDLNNVTPVLAVMIGLAVGIDYALFILSRYRAEYKRMPRADAAGMAVGTAGSAVVFAGAT
VIIALVALIIADIGFLTAMGISAAFTVFVAVLIALTFIPALLGVFGGHAFKGKIPGIGGNPTPKQTWEQALNRRSKGRSW
VKLVQKAPGLVVAVVVLGLGALTIPAMNLQLSLPSDSTSNIDTTQRQSADLMAEGFGAGVNAPFLVIVDTHEVNADSTAL
QPLIEAQEPEEGEFDREQAARFATYMYVTQTYNSNIDVKNAQIISVNDDFTAAQILVTPYTGPADKETPELMHVLRAQEA
QIEDVTGTELGTTGFTAVQLDITEQLEDAMPVYLAVVVGLAIFLLILVFRSLLVPLVAGLGFLLSVGAAFGATVLVWQEG
FGGFVNTPGPLISFMPIFLIGVTFGLAMDYQVFLVTRMREHYTHHNGKGQPGSKYTPVEQSVIEGFTQGSRVVTAAALIM
IAVFVAFIDQPLPFIKIFGFALGAGVFFDAFFIRMGLVPASMFLMGKATWWMPKWLDRILPSLDIEGTALEKEWEEKQAA
R

Sequences:

>Translated_801_residues
MAKLLFRLGRWSYNRKWIVISAWLLILAIVGGLALTMQKGFSNSFTIEDTPSIDATVSLVENFPDQTNPVTAAGVNVVFQ
SPEGTTLDDPQMMTAMDAVVDYIEDNLPDFGGGERFGNPVEVSPALEEMVIEQMTSMGLPEETAAKDAANLAVLSEDKTI
GYTSFNIDVEAAEYVEQKHRDVINEAMQIGEDLGVRVEAGGPAFGDPIQIETTSEIIGIGIAFIVLIFTFGSLIAAGLPL
ITAVIGVGIGALAIVLATAFTDLNNVTPVLAVMIGLAVGIDYALFILSRYRAEYKRMPRADAAGMAVGTAGSAVVFAGAT
VIIALVALIIADIGFLTAMGISAAFTVFVAVLIALTFIPALLGVFGGHAFKGKIPGIGGNPTPKQTWEQALNRRSKGRSW
VKLVQKAPGLVVAVVVLGLGALTIPAMNLQLSLPSDSTSNIDTTQRQSADLMAEGFGAGVNAPFLVIVDTHEVNADSTAL
QPLIEAQEPEEGEFDREQAARFATYMYVTQTYNSNIDVKNAQIISVNDDFTAAQILVTPYTGPADKETPELMHVLRAQEA
QIEDVTGTELGTTGFTAVQLDITEQLEDAMPVYLAVVVGLAIFLLILVFRSLLVPLVAGLGFLLSVGAAFGATVLVWQEG
FGGFVNTPGPLISFMPIFLIGVTFGLAMDYQVFLVTRMREHYTHHNGKGQPGSKYTPVEQSVIEGFTQGSRVVTAAALIM
IAVFVAFIDQPLPFIKIFGFALGAGVFFDAFFIRMGLVPASMFLMGKATWWMPKWLDRILPSLDIEGTALEKEWEEKQAA
R
>Mature_800_residues
AKLLFRLGRWSYNRKWIVISAWLLILAIVGGLALTMQKGFSNSFTIEDTPSIDATVSLVENFPDQTNPVTAAGVNVVFQS
PEGTTLDDPQMMTAMDAVVDYIEDNLPDFGGGERFGNPVEVSPALEEMVIEQMTSMGLPEETAAKDAANLAVLSEDKTIG
YTSFNIDVEAAEYVEQKHRDVINEAMQIGEDLGVRVEAGGPAFGDPIQIETTSEIIGIGIAFIVLIFTFGSLIAAGLPLI
TAVIGVGIGALAIVLATAFTDLNNVTPVLAVMIGLAVGIDYALFILSRYRAEYKRMPRADAAGMAVGTAGSAVVFAGATV
IIALVALIIADIGFLTAMGISAAFTVFVAVLIALTFIPALLGVFGGHAFKGKIPGIGGNPTPKQTWEQALNRRSKGRSWV
KLVQKAPGLVVAVVVLGLGALTIPAMNLQLSLPSDSTSNIDTTQRQSADLMAEGFGAGVNAPFLVIVDTHEVNADSTALQ
PLIEAQEPEEGEFDREQAARFATYMYVTQTYNSNIDVKNAQIISVNDDFTAAQILVTPYTGPADKETPELMHVLRAQEAQ
IEDVTGTELGTTGFTAVQLDITEQLEDAMPVYLAVVVGLAIFLLILVFRSLLVPLVAGLGFLLSVGAAFGATVLVWQEGF
GGFVNTPGPLISFMPIFLIGVTFGLAMDYQVFLVTRMREHYTHHNGKGQPGSKYTPVEQSVIEGFTQGSRVVTAAALIMI
AVFVAFIDQPLPFIKIFGFALGAGVFFDAFFIRMGLVPASMFLMGKATWWMPKWLDRILPSLDIEGTALEKEWEEKQAAR

Specific function: Unknown

COG id: COG2409

COG function: function code R; Predicted drug exporters of the RND superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004869
- InterPro:   IPR000731 [H]

Pfam domain/function: PF03176 MMPL [H]

EC number: NA

Molecular weight: Translated: 85802; Mature: 85671

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: PS50156 SSD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKLLFRLGRWSYNRKWIVISAWLLILAIVGGLALTMQKGFSNSFTIEDTPSIDATVSLV
CHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
ENFPDQTNPVTAAGVNVVFQSPEGTTLDDPQMMTAMDAVVDYIEDNLPDFGGGERFGNPV
HHCCCCCCCEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
EVSPALEEMVIEQMTSMGLPEETAAKDAANLAVLSEDKTIGYTSFNIDVEAAEYVEQKHR
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHCEEEEECCCEEEEEEEEECHHHHHHHHHHHH
DVINEAMQIGEDLGVRVEAGGPAFGDPIQIETTSEIIGIGIAFIVLIFTFGSLIAAGLPL
HHHHHHHHHCHHCCEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITAVIGVGIGALAIVLATAFTDLNNVTPVLAVMIGLAVGIDYALFILSRYRAEYKRMPRA
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DAAGMAVGTAGSAVVFAGATVIIALVALIIADIGFLTAMGISAAFTVFVAVLIALTFIPA
CCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGVFGGHAFKGKIPGIGGNPTPKQTWEQALNRRSKGRSWVKLVQKAPGLVVAVVVLGLG
HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCH
ALTIPAMNLQLSLPSDSTSNIDTTQRQSADLMAEGFGAGVNAPFLVIVDTHEVNADSTAL
HHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHH
QPLIEAQEPEEGEFDREQAARFATYMYVTQTYNSNIDVKNAQIISVNDDFTAAQILVTPY
HHHHHCCCCCCCCCCHHHHHHHHHHHEEEEECCCCCCCCCEEEEEECCCCCEEEEEEECC
TGPADKETPELMHVLRAQEAQIEDVTGTELGTTGFTAVQLDITEQLEDAMPVYLAVVVGL
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHH
AIFLLILVFRSLLVPLVAGLGFLLSVGAAFGATVLVWQEGFGGFVNTPGPLISFMPIFLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHH
GVTFGLAMDYQVFLVTRMREHYTHHNGKGQPGSKYTPVEQSVIEGFTQGSRVVTAAALIM
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH
IAVFVAFIDQPLPFIKIFGFALGAGVFFDAFFIRMGLVPASMFLMGKATWWMPKWLDRIL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHC
PSLDIEGTALEKEWEEKQAAR
CCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
AKLLFRLGRWSYNRKWIVISAWLLILAIVGGLALTMQKGFSNSFTIEDTPSIDATVSLV
HHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
ENFPDQTNPVTAAGVNVVFQSPEGTTLDDPQMMTAMDAVVDYIEDNLPDFGGGERFGNPV
HHCCCCCCCEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
EVSPALEEMVIEQMTSMGLPEETAAKDAANLAVLSEDKTIGYTSFNIDVEAAEYVEQKHR
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHCEEEEECCCEEEEEEEEECHHHHHHHHHHHH
DVINEAMQIGEDLGVRVEAGGPAFGDPIQIETTSEIIGIGIAFIVLIFTFGSLIAAGLPL
HHHHHHHHHCHHCCEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITAVIGVGIGALAIVLATAFTDLNNVTPVLAVMIGLAVGIDYALFILSRYRAEYKRMPRA
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DAAGMAVGTAGSAVVFAGATVIIALVALIIADIGFLTAMGISAAFTVFVAVLIALTFIPA
CCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGVFGGHAFKGKIPGIGGNPTPKQTWEQALNRRSKGRSWVKLVQKAPGLVVAVVVLGLG
HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCH
ALTIPAMNLQLSLPSDSTSNIDTTQRQSADLMAEGFGAGVNAPFLVIVDTHEVNADSTAL
HHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHH
QPLIEAQEPEEGEFDREQAARFATYMYVTQTYNSNIDVKNAQIISVNDDFTAAQILVTPY
HHHHHCCCCCCCCCCHHHHHHHHHHHEEEEECCCCCCCCCEEEEEECCCCCEEEEEEECC
TGPADKETPELMHVLRAQEAQIEDVTGTELGTTGFTAVQLDITEQLEDAMPVYLAVVVGL
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHH
AIFLLILVFRSLLVPLVAGLGFLLSVGAAFGATVLVWQEGFGGFVNTPGPLISFMPIFLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHH
GVTFGLAMDYQVFLVTRMREHYTHHNGKGQPGSKYTPVEQSVIEGFTQGSRVVTAAALIM
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH
IAVFVAFIDQPLPFIKIFGFALGAGVFFDAFFIRMGLVPASMFLMGKATWWMPKWLDRIL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHC
PSLDIEGTALEKEWEEKQAAR
CCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]