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The map label for this gene is 62389099

Identifier: 62389099

GI number: 62389099

Start: 218950

End: 220155

Strand: Direct

Name: 62389099

Synonym: cg0250

Alternate gene names: NA

Gene position: 218950-220155 (Clockwise)

Preceding gene: 62389094

Following gene: 62389102

Centisome position: 6.67

GC content: 61.19

Gene sequence:

>1206_bases
ATGCTGTGGCGGTTGAAAGGAGTGCCTTTCGTGGGTTTTGATGTGGCCAGGGTTCGGGGGCTTTATACCTCTTTGGGCGA
TGGCTGGACGTACCTTAATTCACATCAAATTCCGCAGGTTCCGGAGCGGGTGGCGTCGGGAGTTGCGGCGGCTTTCCGCA
CGCATGCGCAGATTTCTGAGGTGACGTCGCAGCCGATTGCGGTGGATCAGTTGGAGGCTGCTCGCGAGGCAGTTGCGTCG
TTGGCGGGTGTGGATCCGGACTGTGTTGTGCTGGGTCCCACGAGGCAGTTTTTGGCTCATACATTGGCGCGCGGTTTGGG
TGGGTTTGTACGTCGAAAAGCGGGCGTGGTGTTGTCGCGCGCGGACGCGGACTGGCTGACCGCGCCGTTCCGCTCCCTCG
ACGGCGTTTTTAGCTGGGCCGAGCCCGATTTGGGCACCGGCATGCTGCCGGATTGGCAGTACGAGAAGCTTGTTGACGGC
TCGACGCGCCTTGTCGTGCTCAGCGCCGCGCACCCGCTGCTCGGCACGGTCGCCCCAGTGGGCAAGATTGTGGATAAAGT
GCGGGCGCGTTCGCGTGCCTGGGTGCTTGTCGACGCCACCACCTACGCAGCCTACCGCCCCCTGCGCCTAGACGAGTGGG
AAGCCGATATCGTCATGCTTGATCTCGGCGAGTTGGGCGGCCCGCAGATTTCGGCGTTGATTTTCCGTGATACCTCGATG
TTCCCGCGCCTGGATCGCACCGTTCCACTCGAACTGCCCGCAAGCTCCCTGCCGCATGGGCTGCTCGGCGGCGTGCCCAA
CCTGGTGCGGCACCTGGGAAACCTGGATGAAAACGCCCCGTCCGTCGTTGAGGCGATGGGGGAGATGGCGAAATTCCACA
AGGGACTTTTTGAGCATCTTGTGGAATCGCTCGAAGGACTTCACGCGGTGCATATCGTGGGAATTTCCGGCGATGCCGCA
GGTCAAGACGCCGCGTTCCTGGATCGAGTGCCCCGCTTGACCTTCACCATGGAAGGCGTGCCCGCAGATATGGTGTACCG
CCGATTGGTGGACAATCGTTTGATCACTACCGTCAGCCCTGCTGACCCGCTGCTCGAAGCAATGGGTGTGACTGAAGCTG
GCGGATCGATCACTATCGGACTAAGCCCGTTTAGCACCTACTATGAAGTGGATCAGCTGACCAGGGTGCTGGCATCGCTT
GCCTAA

Upstream 100 bases:

>100_bases
AGTGGTGGTGGAGTGATTTTTGGGTATCGACGACAGGTGAATTCATGCACGTTTGAGTGTCCCGTGTGTGGGGTAATGTT
GTCCAAGAGAGTGGAAGGAA

Downstream 100 bases:

>100_bases
ACCGCAAGCACGAGCTTGCCGGTGATGGTGCCGTCTTGAATTTTCTGCAAGGCGGCGGCTGCTTCGGCTAGCGGCAAGGT
GTGGTCGATGTGAGGGGTAA

Product: aminotransferase

Products: NA

Alternate protein names: Aminotransferase; Cysteine Desulfurase; Cysteine Desulfurase Catalytic Subunit CsdA; Selenocysteine Lyase; Aminotransferase/Cysteine Desulfurase; Cysteine Desulphurase-Like Protein

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MLWRLKGVPFVGFDVARVRGLYTSLGDGWTYLNSHQIPQVPERVASGVAAAFRTHAQISEVTSQPIAVDQLEAAREAVAS
LAGVDPDCVVLGPTRQFLAHTLARGLGGFVRRKAGVVLSRADADWLTAPFRSLDGVFSWAEPDLGTGMLPDWQYEKLVDG
STRLVVLSAAHPLLGTVAPVGKIVDKVRARSRAWVLVDATTYAAYRPLRLDEWEADIVMLDLGELGGPQISALIFRDTSM
FPRLDRTVPLELPASSLPHGLLGGVPNLVRHLGNLDENAPSVVEAMGEMAKFHKGLFEHLVESLEGLHAVHIVGISGDAA
GQDAAFLDRVPRLTFTMEGVPADMVYRRLVDNRLITTVSPADPLLEAMGVTEAGGSITIGLSPFSTYYEVDQLTRVLASL
A

Sequences:

>Translated_401_residues
MLWRLKGVPFVGFDVARVRGLYTSLGDGWTYLNSHQIPQVPERVASGVAAAFRTHAQISEVTSQPIAVDQLEAAREAVAS
LAGVDPDCVVLGPTRQFLAHTLARGLGGFVRRKAGVVLSRADADWLTAPFRSLDGVFSWAEPDLGTGMLPDWQYEKLVDG
STRLVVLSAAHPLLGTVAPVGKIVDKVRARSRAWVLVDATTYAAYRPLRLDEWEADIVMLDLGELGGPQISALIFRDTSM
FPRLDRTVPLELPASSLPHGLLGGVPNLVRHLGNLDENAPSVVEAMGEMAKFHKGLFEHLVESLEGLHAVHIVGISGDAA
GQDAAFLDRVPRLTFTMEGVPADMVYRRLVDNRLITTVSPADPLLEAMGVTEAGGSITIGLSPFSTYYEVDQLTRVLASL
A
>Mature_401_residues
MLWRLKGVPFVGFDVARVRGLYTSLGDGWTYLNSHQIPQVPERVASGVAAAFRTHAQISEVTSQPIAVDQLEAAREAVAS
LAGVDPDCVVLGPTRQFLAHTLARGLGGFVRRKAGVVLSRADADWLTAPFRSLDGVFSWAEPDLGTGMLPDWQYEKLVDG
STRLVVLSAAHPLLGTVAPVGKIVDKVRARSRAWVLVDATTYAAYRPLRLDEWEADIVMLDLGELGGPQISALIFRDTSM
FPRLDRTVPLELPASSLPHGLLGGVPNLVRHLGNLDENAPSVVEAMGEMAKFHKGLFEHLVESLEGLHAVHIVGISGDAA
GQDAAFLDRVPRLTFTMEGVPADMVYRRLVDNRLITTVSPADPLLEAMGVTEAGGSITIGLSPFSTYYEVDQLTRVLASL
A

Specific function: Unknown

COG id: COG0520

COG function: function code E; Selenocysteine lyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43258; Mature: 43258

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWRLKGVPFVGFDVARVRGLYTSLGDGWTYLNSHQIPQVPERVASGVAAAFRTHAQISE
CCEEECCCCEECHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VTSQPIAVDQLEAAREAVASLAGVDPDCVVLGPTRQFLAHTLARGLGGFVRRKAGVVLSR
HHCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCEEEEE
ADADWLTAPFRSLDGVFSWAEPDLGTGMLPDWQYEKLVDGSTRLVVLSAAHPLLGTVAPV
CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCHHHHHHHH
GKIVDKVRARSRAWVLVDATTYAAYRPLRLDEWEADIVMLDLGELGGPQISALIFRDTSM
HHHHHHHHHCCCEEEEEEEHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCC
FPRLDRTVPLELPASSLPHGLLGGVPNLVRHLGNLDENAPSVVEAMGEMAKFHKGLFEHL
CCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VESLEGLHAVHIVGISGDAAGQDAAFLDRVPRLTFTMEGVPADMVYRRLVDNRLITTVSP
HHHHCCCEEEEEEEECCCCCCCCHHHHHHCCCEEEEECCCCHHHHHHHHHCCCEEEEECC
ADPLLEAMGVTEAGGSITIGLSPFSTYYEVDQLTRVLASLA
HHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLWRLKGVPFVGFDVARVRGLYTSLGDGWTYLNSHQIPQVPERVASGVAAAFRTHAQISE
CCEEECCCCEECHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VTSQPIAVDQLEAAREAVASLAGVDPDCVVLGPTRQFLAHTLARGLGGFVRRKAGVVLSR
HHCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCEEEEE
ADADWLTAPFRSLDGVFSWAEPDLGTGMLPDWQYEKLVDGSTRLVVLSAAHPLLGTVAPV
CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCHHHHHHHH
GKIVDKVRARSRAWVLVDATTYAAYRPLRLDEWEADIVMLDLGELGGPQISALIFRDTSM
HHHHHHHHHCCCEEEEEEEHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCC
FPRLDRTVPLELPASSLPHGLLGGVPNLVRHLGNLDENAPSVVEAMGEMAKFHKGLFEHL
CCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VESLEGLHAVHIVGISGDAAGQDAAFLDRVPRLTFTMEGVPADMVYRRLVDNRLITTVSP
HHHHCCCEEEEEEEECCCCCCCCHHHHHHCCCEEEEECCCCHHHHHHHHHCCCEEEEECC
ADPLLEAMGVTEAGGSITIGLSPFSTYYEVDQLTRVLASLA
HHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA