Click here to switch to the map view.

The map label for this gene is 62185175

Identifier: 62185175

GI number: 62185175

Start: 634193

End: 634864

Strand: Direct

Name: 62185175

Synonym: CAB558

Alternate gene names: NA

Gene position: 634193-634864 (Clockwise)

Preceding gene: 62185174

Following gene: 62185176

Centisome position: 55.42

GC content: 38.99

Gene sequence:

>672_bases
GTGCATAATGAAATGATCTTCATAGCACAAACCCTTTTTGTTGTGCTTGCAGGGATATTTTTTTCTTCTAAAAGTACAGG
CTGGCTAACAGGCTGGTTGGCTACCCTATCAGTAATTATGAACGTTTTTGTATTAAAACAAATCGTTCTATGCGGCCTAG
AAATTACCTCGGCTGATGTTTATATGATTGGTATCTTGTCTTGTTTAAATTTCTCTAGAGAAGTTTACGGACAAAGTAAA
GTAAATGAAGCTATGGTTGGCTCGTGGGTAATCACTATAGCCTTTCTTCTTTTAACCCAGTTCCATCTTGCACTGAAGCC
TTCTCCTAACGATACTAGCCAAAACCATTTTATCGCGCTGTTCTCACCCACACTACGATTAACCCTAGCTTCTTTAGTGA
CCGTAATCCTCGTACAAATTATAGATCTGAAACTCTTTTCCTACCTAAAAACCCTGTTTAAAGATAAAGCATTCGGAACC
AGATCAGCCATATCTTTAGTTTCTTCTCAAATCCTGGATACCTTGCTATTTTCTTTTCTAGGCCTCTACGGGATCGTAGC
GAACCTTACTCATGTCATTCTATTTTCTTTAATTACCAAAATCTGTGTCATCGCCATGTCTGTCCCCATTGTGGTCTTTG
GTAAACACCTTAGAAAGCGCAACGCTACCTAA

Upstream 100 bases:

>100_bases
CCTATACTTGTAAGTCGTTTTCTGGTCAGATTGCCTTTTTATTTGTACTGTCTATGAGGCTTAGACCGATGAACTCTACT
CAATCCATGGAGATACTGTT

Downstream 100 bases:

>100_bases
AAGGGCAAGGTAAAAGGCCTGATGTATATAGGAATTTTTGTCATTTCAAAGAGCTTGCCGTCTACTGGATAAATTCTATT
TACAGGAAAATATGCTCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MHNEMIFIAQTLFVVLAGIFFSSKSTGWLTGWLATLSVIMNVFVLKQIVLCGLEITSADVYMIGILSCLNFSREVYGQSK
VNEAMVGSWVITIAFLLLTQFHLALKPSPNDTSQNHFIALFSPTLRLTLASLVTVILVQIIDLKLFSYLKTLFKDKAFGT
RSAISLVSSQILDTLLFSFLGLYGIVANLTHVILFSLITKICVIAMSVPIVVFGKHLRKRNAT

Sequences:

>Translated_223_residues
MHNEMIFIAQTLFVVLAGIFFSSKSTGWLTGWLATLSVIMNVFVLKQIVLCGLEITSADVYMIGILSCLNFSREVYGQSK
VNEAMVGSWVITIAFLLLTQFHLALKPSPNDTSQNHFIALFSPTLRLTLASLVTVILVQIIDLKLFSYLKTLFKDKAFGT
RSAISLVSSQILDTLLFSFLGLYGIVANLTHVILFSLITKICVIAMSVPIVVFGKHLRKRNAT
>Mature_223_residues
MHNEMIFIAQTLFVVLAGIFFSSKSTGWLTGWLATLSVIMNVFVLKQIVLCGLEITSADVYMIGILSCLNFSREVYGQSK
VNEAMVGSWVITIAFLLLTQFHLALKPSPNDTSQNHFIALFSPTLRLTLASLVTVILVQIIDLKLFSYLKTLFKDKAFGT
RSAISLVSSQILDTLLFSFLGLYGIVANLTHVILFSLITKICVIAMSVPIVVFGKHLRKRNAT

Specific function: Unknown

COG id: COG1738

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24697; Mature: 24697

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNEMIFIAQTLFVVLAGIFFSSKSTGWLTGWLATLSVIMNVFVLKQIVLCGLEITSADV
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHH
YMIGILSCLNFSREVYGQSKVNEAMVGSWVITIAFLLLTQFHLALKPSPNDTSQNHFIAL
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE
FSPTLRLTLASLVTVILVQIIDLKLFSYLKTLFKDKAFGTRSAISLVSSQILDTLLFSFL
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
GLYGIVANLTHVILFSLITKICVIAMSVPIVVFGKHLRKRNAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MHNEMIFIAQTLFVVLAGIFFSSKSTGWLTGWLATLSVIMNVFVLKQIVLCGLEITSADV
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHH
YMIGILSCLNFSREVYGQSKVNEAMVGSWVITIAFLLLTQFHLALKPSPNDTSQNHFIAL
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE
FSPTLRLTLASLVTVILVQIIDLKLFSYLKTLFKDKAFGTRSAISLVSSQILDTLLFSFL
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
GLYGIVANLTHVILFSLITKICVIAMSVPIVVFGKHLRKRNAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA