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The map label for this gene is yecS [H]

Identifier: 62185155

GI number: 62185155

Start: 606725

End: 607372

Strand: Direct

Name: yecS [H]

Synonym: CAB530

Alternate gene names: 62185155

Gene position: 606725-607372 (Clockwise)

Preceding gene: 62185150

Following gene: 62185156

Centisome position: 53.02

GC content: 41.2

Gene sequence:

>648_bases
ATGGAACATTGGGTGGCTACAGCAAGAGTACTGCTACGTGGTTGTGGTTATACGTTATTTGTTAGCGGAATTTCCATACT
CTGTGGCTCCTTTTTGGGTGTAATTATCGGAACAATGACATCGCGTTATTTTCCTTGCCGCATTACGCGATGTCTAGGAA
ATCTCTACGTCACCGTGATCCGTGGTACACCTCTGTTTATTCAAATTCTCATATTTTACTTTGGTTTACCCTCGATAATT
AGGTTGGACCCTACGCCCTTAATGGCGGGATTGATTGCCTTAAGCATCAATTCTTCTGCCTATCTTGCTGAAAACATCCG
TGGGGGGATTAATGCCTTGTCAGTAGGCCAATGGGAATCCGCAAAAGTTTTGGGCTACAAAAAGTCGCAGATTTTTTTTT
ATATCATCTATCCACAGGTTTTTAAAAATATCTTACCTTCTTTAACCAACGAATTTGTTGCATTGATTAAAGAAAGTAGC
ATTTTGATGGTTGTCGGCGTCCCTGAACTTACTAAGGTAAGTAAGGACATTGTTTCTCGCGAACTCAATCCCATGGAAAT
GTATAGTATTTGCGCAGCCCTATATTTGCTGATGACATCATTGTTTTCTTATGTAGCCACGTTGCTTGAGAAGAGGGGGG
GAGTATGA

Upstream 100 bases:

>100_bases
ATTTCCTTAATAGCCAAAGATATGGAAAACTTCTTGCTAGTTTTTTCTGATTAATTGCATGATTATGCTTTAATTGTAAA
TAAATATGCGTTGCTAATTT

Downstream 100 bases:

>100_bases
CTGTTAAGGTTAGAAATCTTACGTATTCCATAAATGACAAACATATTTTATCTAAAGTTTCATTCTCTTTAGAAGAGGGC
CATATTACTCTTTTTGTTGG

Product: ABC transporter, membrane permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MEHWVATARVLLRGCGYTLFVSGISILCGSFLGVIIGTMTSRYFPCRITRCLGNLYVTVIRGTPLFIQILIFYFGLPSII
RLDPTPLMAGLIALSINSSAYLAENIRGGINALSVGQWESAKVLGYKKSQIFFYIIYPQVFKNILPSLTNEFVALIKESS
ILMVVGVPELTKVSKDIVSRELNPMEMYSICAALYLLMTSLFSYVATLLEKRGGV

Sequences:

>Translated_215_residues
MEHWVATARVLLRGCGYTLFVSGISILCGSFLGVIIGTMTSRYFPCRITRCLGNLYVTVIRGTPLFIQILIFYFGLPSII
RLDPTPLMAGLIALSINSSAYLAENIRGGINALSVGQWESAKVLGYKKSQIFFYIIYPQVFKNILPSLTNEFVALIKESS
ILMVVGVPELTKVSKDIVSRELNPMEMYSICAALYLLMTSLFSYVATLLEKRGGV
>Mature_215_residues
MEHWVATARVLLRGCGYTLFVSGISILCGSFLGVIIGTMTSRYFPCRITRCLGNLYVTVIRGTPLFIQILIFYFGLPSII
RLDPTPLMAGLIALSINSSAYLAENIRGGINALSVGQWESAKVLGYKKSQIFFYIIYPQVFKNILPSLTNEFVALIKESS
ILMVVGVPELTKVSKDIVSRELNPMEMYSICAALYLLMTSLFSYVATLLEKRGGV

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=203, Percent_Identity=36.9458128078818, Blast_Score=137, Evalue=6e-34,
Organism=Escherichia coli, GI1787030, Length=206, Percent_Identity=32.0388349514563, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1787087, Length=190, Percent_Identity=33.1578947368421, Blast_Score=114, Evalue=6e-27,
Organism=Escherichia coli, GI1786874, Length=201, Percent_Identity=25.8706467661692, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1788646, Length=193, Percent_Identity=25.9067357512953, Blast_Score=87, Evalue=8e-19,
Organism=Escherichia coli, GI1788645, Length=213, Percent_Identity=28.169014084507, Blast_Score=87, Evalue=8e-19,
Organism=Escherichia coli, GI1787086, Length=212, Percent_Identity=28.3018867924528, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1786873, Length=210, Percent_Identity=27.1428571428571, Blast_Score=77, Evalue=6e-16,
Organism=Escherichia coli, GI87082239, Length=217, Percent_Identity=29.9539170506912, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI48994930, Length=129, Percent_Identity=29.4573643410853, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 23801; Mature: 23801

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHWVATARVLLRGCGYTLFVSGISILCGSFLGVIIGTMTSRYFPCRITRCLGNLYVTVI
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEE
RGTPLFIQILIFYFGLPSIIRLDPTPLMAGLIALSINSSAYLAENIRGGINALSVGQWES
CCCHHHHHHHHHHHCCCHHEEECCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCC
AKVLGYKKSQIFFYIIYPQVFKNILPSLTNEFVALIKESSILMVVGVPELTKVSKDIVSR
CCEEEEECCEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHH
ELNPMEMYSICAALYLLMTSLFSYVATLLEKRGGV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEHWVATARVLLRGCGYTLFVSGISILCGSFLGVIIGTMTSRYFPCRITRCLGNLYVTVI
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEE
RGTPLFIQILIFYFGLPSIIRLDPTPLMAGLIALSINSSAYLAENIRGGINALSVGQWES
CCCHHHHHHHHHHHCCCHHEEECCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCC
AKVLGYKKSQIFFYIIYPQVFKNILPSLTNEFVALIKESSILMVVGVPELTKVSKDIVSR
CCEEEEECCEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHH
ELNPMEMYSICAALYLLMTSLFSYVATLLEKRGGV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]