| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62185137
Identifier: 62185137
GI number: 62185137
Start: 587186
End: 588019
Strand: Direct
Name: 62185137
Synonym: CAB509
Alternate gene names: NA
Gene position: 587186-588019 (Clockwise)
Preceding gene: 62185136
Following gene: 62185138
Centisome position: 51.31
GC content: 40.89
Gene sequence:
>834_bases ATGACTACTTCTAATAATAACACTAATGATTGTTATTTTTCTGTAGATTCGACTTTTGAAGGTGACGTTGCTGCTGGCAA CGTACAGACTAACAACGTCTCATCTCAAAGTATAGAATCCACGAACAGCTTAGTTGTAAATCCTCCTGGAAAATCAACTT TTTTAGGAACAATCACTGTGGAAGGACTTACTTCAGCTAACGACCTGAGTATCACTGGCAGCGATGTATCTGTAAATTTG CACGGTAATAGATTGAGTAACGTTGCCAGACCTTCAGCCCCGTCCTCTCCAGTCCCGGCAAATTATATACGTTCTCCAGA GTACTTTTTCTGCTCACTCAATGAGTTTGGAAGGATCAACATTAATACACAGCAACCCGTTCCCATTCTCGGCCCCGATA GGCTGGTCTACCAATCGCAAAATATTTTCTCCCACATACGCTTTGTAGACTACCCTTATGGAGCTTCAAAAGTCACGTAT CCAGGATCCCACTGGGTGCAATTATTAAGCAAAGGCATCTACATGATCGATTACGGCATTAATAAACGCTGGGGATGGAA TAATGGCTGGGGAGGCGACGTGCATCTGAAAAATGCTTTAGGCACGATTTATAGCAGCAATACTATCTATAGTGGGGGAG GATACTCTGGATTTGCAAGTTTATCTACAGCTTTTCGTGTCTCTAATCTAGCTAAAGATCCAAATGGCACTATAACAAAT AATGCAAAAGACAGCATAAAAGAAAATTTATTCTGCGCACAGCTAACAACTAATTGGACAGTTTTAAGTGCTTTTTATTT TGGAATCATTTTCTACCCAGACCAAGGGGAATAG
Upstream 100 bases:
>100_bases TTATATCCAATTAATTTTTATCATAATTAAACTAAACAGATTAAAAATTGACCTATAATTTATTATCTGATTTTTATTAG AAAAAAAATCGGAATAATAA
Downstream 100 bases:
>100_bases CCATGGATGATAAAGACAAAACTATTTCTAGATTCACATCAGATAATCCTAATAATCAAACTAGAGAAACTAATTTCGAT GCGACAGGAGTTAAAGACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MTTSNNNTNDCYFSVDSTFEGDVAAGNVQTNNVSSQSIESTNSLVVNPPGKSTFLGTITVEGLTSANDLSITGSDVSVNL HGNRLSNVARPSAPSSPVPANYIRSPEYFFCSLNEFGRININTQQPVPILGPDRLVYQSQNIFSHIRFVDYPYGASKVTY PGSHWVQLLSKGIYMIDYGINKRWGWNNGWGGDVHLKNALGTIYSSNTIYSGGGYSGFASLSTAFRVSNLAKDPNGTITN NAKDSIKENLFCAQLTTNWTVLSAFYFGIIFYPDQGE
Sequences:
>Translated_277_residues MTTSNNNTNDCYFSVDSTFEGDVAAGNVQTNNVSSQSIESTNSLVVNPPGKSTFLGTITVEGLTSANDLSITGSDVSVNL HGNRLSNVARPSAPSSPVPANYIRSPEYFFCSLNEFGRININTQQPVPILGPDRLVYQSQNIFSHIRFVDYPYGASKVTY PGSHWVQLLSKGIYMIDYGINKRWGWNNGWGGDVHLKNALGTIYSSNTIYSGGGYSGFASLSTAFRVSNLAKDPNGTITN NAKDSIKENLFCAQLTTNWTVLSAFYFGIIFYPDQGE >Mature_276_residues TTSNNNTNDCYFSVDSTFEGDVAAGNVQTNNVSSQSIESTNSLVVNPPGKSTFLGTITVEGLTSANDLSITGSDVSVNLH GNRLSNVARPSAPSSPVPANYIRSPEYFFCSLNEFGRININTQQPVPILGPDRLVYQSQNIFSHIRFVDYPYGASKVTYP GSHWVQLLSKGIYMIDYGINKRWGWNNGWGGDVHLKNALGTIYSSNTIYSGGGYSGFASLSTAFRVSNLAKDPNGTITNN AKDSIKENLFCAQLTTNWTVLSAFYFGIIFYPDQGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30172; Mature: 30040
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSNNNTNDCYFSVDSTFEGDVAAGNVQTNNVSSQSIESTNSLVVNPPGKSTFLGTITV CCCCCCCCCEEEEEECCCCCCCEEECCEECCCCCCHHHCCCCCEEECCCCCCEEEEEEEE EGLTSANDLSITGSDVSVNLHGNRLSNVARPSAPSSPVPANYIRSPEYFFCSLNEFGRIN ECCCCCCCEEEECCEEEEEECCCHHHHCCCCCCCCCCCCHHHCCCCCEEEEECCCCCEEE INTQQPVPILGPDRLVYQSQNIFSHIRFVDYPYGASKVTYPGSHWVQLLSKGIYMIDYGI ECCCCCCCEECCCCEEEECCCHHHHEEEEECCCCCCEEECCCHHHHHHHHCCEEEEEECC NKRWGWNNGWGGDVHLKNALGTIYSSNTIYSGGGYSGFASLSTAFRVSNLAKDPNGTITN CCCCCCCCCCCCCEEECCHHEEEEECCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCC NAKDSIKENLFCAQLTTNWTVLSAFYFGIIFYPDQGE CCHHHHHHCEEEEEEECCCHHEEEEEEEEEEECCCCC >Mature Secondary Structure TTSNNNTNDCYFSVDSTFEGDVAAGNVQTNNVSSQSIESTNSLVVNPPGKSTFLGTITV CCCCCCCCEEEEEECCCCCCCEEECCEECCCCCCHHHCCCCCEEECCCCCCEEEEEEEE EGLTSANDLSITGSDVSVNLHGNRLSNVARPSAPSSPVPANYIRSPEYFFCSLNEFGRIN ECCCCCCCEEEECCEEEEEECCCHHHHCCCCCCCCCCCCHHHCCCCCEEEEECCCCCEEE INTQQPVPILGPDRLVYQSQNIFSHIRFVDYPYGASKVTYPGSHWVQLLSKGIYMIDYGI ECCCCCCCEECCCCEEEECCCHHHHEEEEECCCCCCEEECCCHHHHHHHHCCEEEEEECC NKRWGWNNGWGGDVHLKNALGTIYSSNTIYSGGGYSGFASLSTAFRVSNLAKDPNGTITN CCCCCCCCCCCCCEEECCHHEEEEECCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCC NAKDSIKENLFCAQLTTNWTVLSAFYFGIIFYPDQGE CCHHHHHHCEEEEEEECCCHHEEEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA