Click here to switch to the map view.

The map label for this gene is oxaA [H]

Identifier: 62185087

GI number: 62185087

Start: 526589

End: 528973

Strand: Direct

Name: oxaA [H]

Synonym: CAB458

Alternate gene names: 62185087

Gene position: 526589-528973 (Clockwise)

Preceding gene: 62185086

Following gene: 62185088

Centisome position: 46.02

GC content: 37.53

Gene sequence:

>2385_bases
ATGAATAAACGTTCATTGTTGTTTGTTTCTTTAGTTGGCATGGCTTTTGTCGGATGCCAAATCTTTTTTGGTTATAATGA
TTTTCGCTCTTGCAAAGCTCTTACAGAGAAACAAAAAACAATTTCAGAACAAGTGCTTGCAGCAACTAAGTCTATGGGTC
TAGGTGTTTCTCCCTGGACAACACACCCAGATGAAGAAGTAAATAAGAATCATTACGCAGTGTGTATTGGAGATAGACTT
CTCCTATTGAATCAAGGGAATTCAGCAAGTTCAGTTTATTCTTCTGGATCTCGTTGGGATTTTATAGAAGAGACAACAGC
TTGTGATAATATTCACGTTGCTTTGTACGGGGAAACAGGTAAATCGACAGTACCTTCACATACAGGAAAGGTATTTCTTC
CTGTAACCAGCGAAGCTCTTCCTGTTTTAGTCGTGGAGTTTCGTAATAATCAAGAACCTATAGTTTTCTTAGGTCAATAT
AAGCAGGATGAAGGTAAGGTTTATAATAAAGACAGTCAAGTTTACGGAACGTCTTTAGTGTTCTGGAGGTCGGGTAATGA
ATACCTACCTTTAGGTATTTATAATTCTAAGGAAGAAAGATTAGAATCCTTAGATCTTCCAATGACTAAAGCTGCTATTT
TTAGCAATTCTCGTGAAACAAATACAGACACCCATTCTGGCCAGTATTTTGTTCTGTCTAATGAATACATGCAATTAGTG
ATTTCTCAAGAGAGTGGTGCTATAGAAGGCATTAACCTTCCTTTCTCTTCAGAAGATAGCAAGAGTATAGTTAATGAAAT
TGGTTTTGATAGAGATTTGAAATCTCAAGTGCCTAGTGAGGCTTCTTTCCCTGGGCTACCTTCTGTAGGACCAAATAACC
AAATAGTCTCTGATACTATAGGAGGATATTATCCTTTGTTGCGTAGGGGGATTCTTTCTGATTCGAAGAAACGCACACCT
GCTAGTTATCATGCTTTAAATATTGTTTCGGGTAGAGACCTTGTCAATCCGGTTACTTCTGGATATCGAGTTTCTGTCTT
CAACAGCAATGTATTGGAATTAGAGAGCTACGACGGCTCTATTAAGAAAACTTATACATTTCCTGAGCAACAACCCTATG
CTTTTGAGGTTGCTGTTGGTTTAAATCGTTCTAGTGACGATATGTGGATAACTTCAGGTGTCCCTGAAGTTGAAATTATG
TCCAATACATTTAGTCCAGCTATTAAATACCGCGTGATTAAAAAGAATAAAGGACAGTTGGATAAGGTGAAACTGCCTAA
GTCTAAAGATCCATTATCTTTGCGTAGTGGAGTGTATCCTCAATGGATACTCAATTCCAATGGATATTTCGGTATTATTT
TATCTCCGCTCACAGATATACCTGCTGGATACGCTGCTGCTTATGTTTCTGGAAATTCTGTTCCTACACGCTTATCTTCG
CTATATCCTAAAAATCAAGCGTATCCTGCTTCTAAATATCCGGGATATGAAACCTTACTTCCTTTACCCAAGGAAGAAGG
CACGTATCGTTTTCTGGTCTACGCCGGACCTTTAGCAGAACCTACTTTAAAGGCTTTAGATCGAGCATATACAAATCCTA
AAGGTGAAAACTCTCAGTATCTTGATTGTATAACTTTCCGAGGACTATTCGCTTTTATTACTGAGCCTTTTGCAGCTTTA
CTTTTTATCATTATGAAGTTTTTCAAAATGATCACAGGCTCTTGGGGAATTTCTATTATTCTGCTTACAGTATTTTTAAA
ATTATTATTATACCCATTAAATGCTTGGTCTATACGTTCCATGAGACGTATGCAAAAGCTGTCTCCTTATATTCAGGAAA
TTCAACAAAAGTATAAGAAAGAGCCTAAGCGAGCCCAAATGGAAGTGATGGCTTTATATAAGACAAATAAGGTGAATCCT
ATAACAGGCTGTTTGCCTTTATTGATTCAATTGCCTTTTCTTATCGCTATGTTTGATTTATTAAAATCCTCATTCCTTCT
TCGTGGCGCCTCTTTCATTCCAGGATGGATTGATAATTTAACAGCTCCGGATGTTTTGTTCTCTTGGACGACACCAGTTT
GGTTTATTGGCAACGAATTTCATCTTCTTCCCATCTTGTTGGGGGTTGTCATGTTCATCCAGCAAAAGCTTTCAGCTTTG
CAGAAAAAAGGACCTGTTACAGATCAACAAAGACAACAGGAAGCAATGGGGACTATGATGGCTCTTTTGTTTACCTTTAT
GTTTTATAATTTCCCTTCAGGTCTAAATATTTATTGGTTTTCCTCTATGCTTCTTGGGTTGATCCAGCAGTGGGTGACTA
ATAAGATTTTGGACAGGCAGCATCTGAAAAACGAAATCACTGTTAATAAGAAAAAGCAAAGGTAA

Upstream 100 bases:

>100_bases
AATAGAAAGAATTTCATACGTATTTTAGGAATCTCTTATGGGAGATAAATAGATACTATGGTATTTTAGCTTTTTAGTTT
AATTTTTCAGAGTTTAACAG

Downstream 100 bases:

>100_bases
CAACTGAAAAAAAAGCTTTTTTATACTAAAAAAGATATAAGAAAACTATTTAGATGAGATAGTTTTATGCGGGCGTGGGA
AGACTTTCTTTTGCTACAAG

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 794; Mature: 794

Protein sequence:

>794_residues
MNKRSLLFVSLVGMAFVGCQIFFGYNDFRSCKALTEKQKTISEQVLAATKSMGLGVSPWTTHPDEEVNKNHYAVCIGDRL
LLLNQGNSASSVYSSGSRWDFIEETTACDNIHVALYGETGKSTVPSHTGKVFLPVTSEALPVLVVEFRNNQEPIVFLGQY
KQDEGKVYNKDSQVYGTSLVFWRSGNEYLPLGIYNSKEERLESLDLPMTKAAIFSNSRETNTDTHSGQYFVLSNEYMQLV
ISQESGAIEGINLPFSSEDSKSIVNEIGFDRDLKSQVPSEASFPGLPSVGPNNQIVSDTIGGYYPLLRRGILSDSKKRTP
ASYHALNIVSGRDLVNPVTSGYRVSVFNSNVLELESYDGSIKKTYTFPEQQPYAFEVAVGLNRSSDDMWITSGVPEVEIM
SNTFSPAIKYRVIKKNKGQLDKVKLPKSKDPLSLRSGVYPQWILNSNGYFGIILSPLTDIPAGYAAAYVSGNSVPTRLSS
LYPKNQAYPASKYPGYETLLPLPKEEGTYRFLVYAGPLAEPTLKALDRAYTNPKGENSQYLDCITFRGLFAFITEPFAAL
LFIIMKFFKMITGSWGISIILLTVFLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKYKKEPKRAQMEVMALYKTNKVNP
ITGCLPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWTTPVWFIGNEFHLLPILLGVVMFIQQKLSAL
QKKGPVTDQQRQQEAMGTMMALLFTFMFYNFPSGLNIYWFSSMLLGLIQQWVTNKILDRQHLKNEITVNKKKQR

Sequences:

>Translated_794_residues
MNKRSLLFVSLVGMAFVGCQIFFGYNDFRSCKALTEKQKTISEQVLAATKSMGLGVSPWTTHPDEEVNKNHYAVCIGDRL
LLLNQGNSASSVYSSGSRWDFIEETTACDNIHVALYGETGKSTVPSHTGKVFLPVTSEALPVLVVEFRNNQEPIVFLGQY
KQDEGKVYNKDSQVYGTSLVFWRSGNEYLPLGIYNSKEERLESLDLPMTKAAIFSNSRETNTDTHSGQYFVLSNEYMQLV
ISQESGAIEGINLPFSSEDSKSIVNEIGFDRDLKSQVPSEASFPGLPSVGPNNQIVSDTIGGYYPLLRRGILSDSKKRTP
ASYHALNIVSGRDLVNPVTSGYRVSVFNSNVLELESYDGSIKKTYTFPEQQPYAFEVAVGLNRSSDDMWITSGVPEVEIM
SNTFSPAIKYRVIKKNKGQLDKVKLPKSKDPLSLRSGVYPQWILNSNGYFGIILSPLTDIPAGYAAAYVSGNSVPTRLSS
LYPKNQAYPASKYPGYETLLPLPKEEGTYRFLVYAGPLAEPTLKALDRAYTNPKGENSQYLDCITFRGLFAFITEPFAAL
LFIIMKFFKMITGSWGISIILLTVFLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKYKKEPKRAQMEVMALYKTNKVNP
ITGCLPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWTTPVWFIGNEFHLLPILLGVVMFIQQKLSAL
QKKGPVTDQQRQQEAMGTMMALLFTFMFYNFPSGLNIYWFSSMLLGLIQQWVTNKILDRQHLKNEITVNKKKQR
>Mature_794_residues
MNKRSLLFVSLVGMAFVGCQIFFGYNDFRSCKALTEKQKTISEQVLAATKSMGLGVSPWTTHPDEEVNKNHYAVCIGDRL
LLLNQGNSASSVYSSGSRWDFIEETTACDNIHVALYGETGKSTVPSHTGKVFLPVTSEALPVLVVEFRNNQEPIVFLGQY
KQDEGKVYNKDSQVYGTSLVFWRSGNEYLPLGIYNSKEERLESLDLPMTKAAIFSNSRETNTDTHSGQYFVLSNEYMQLV
ISQESGAIEGINLPFSSEDSKSIVNEIGFDRDLKSQVPSEASFPGLPSVGPNNQIVSDTIGGYYPLLRRGILSDSKKRTP
ASYHALNIVSGRDLVNPVTSGYRVSVFNSNVLELESYDGSIKKTYTFPEQQPYAFEVAVGLNRSSDDMWITSGVPEVEIM
SNTFSPAIKYRVIKKNKGQLDKVKLPKSKDPLSLRSGVYPQWILNSNGYFGIILSPLTDIPAGYAAAYVSGNSVPTRLSS
LYPKNQAYPASKYPGYETLLPLPKEEGTYRFLVYAGPLAEPTLKALDRAYTNPKGENSQYLDCITFRGLFAFITEPFAAL
LFIIMKFFKMITGSWGISIILLTVFLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKYKKEPKRAQMEVMALYKTNKVNP
ITGCLPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWTTPVWFIGNEFHLLPILLGVVMFIQQKLSAL
QKKGPVTDQQRQQEAMGTMMALLFTFMFYNFPSGLNIYWFSSMLLGLIQQWVTNKILDRQHLKNEITVNKKKQR

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=300, Percent_Identity=33.3333333333333, Blast_Score=155, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019998
- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 89308; Mature: 89308

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKRSLLFVSLVGMAFVGCQIFFGYNDFRSCKALTEKQKTISEQVLAATKSMGLGVSPWT
CCCCHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
THPDEEVNKNHYAVCIGDRLLLLNQGNSASSVYSSGSRWDFIEETTACDNIHVALYGETG
CCCCHHCCCCEEEEEEECEEEEEECCCCHHHHHCCCCCCCCHHHCCCCCCEEEEEECCCC
KSTVPSHTGKVFLPVTSEALPVLVVEFRNNQEPIVFLGQYKQDEGKVYNKDSQVYGTSLV
CCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCEEEEECCCCCCCCEECCCCCEEEEEEE
FWRSGNEYLPLGIYNSKEERLESLDLPMTKAAIFSNSRETNTDTHSGQYFVLSNEYMQLV
EEECCCCEEEEEECCCHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCEEEEE
ISQESGAIEGINLPFSSEDSKSIVNEIGFDRDLKSQVPSEASFPGLPSVGPNNQIVSDTI
EECCCCCEEEECCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHC
GGYYPLLRRGILSDSKKRTPASYHALNIVSGRDLVNPVTSGYRVSVFNSNVLELESYDGS
CHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHCCCCEEEEEECCCEEEEECCCCC
IKKTYTFPEQQPYAFEVAVGLNRSSDDMWITSGVPEVEIMSNTFSPAIKYRVIKKNKGQL
CEEEEECCCCCCEEEEEEEECCCCCCCEEEECCCCCEEEECCCCCCCCEEEEEECCCCCC
DKVKLPKSKDPLSLRSGVYPQWILNSNGYFGIILSPLTDIPAGYAAAYVSGNSVPTRLSS
CEEECCCCCCCCHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCEEEEECCCCCHHHHHH
LYPKNQAYPASKYPGYETLLPLPKEEGTYRFLVYAGPLAEPTLKALDRAYTNPKGENSQY
CCCCCCCCCCCCCCCCCEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCE
LDCITFRGLFAFITEPFAALLFIIMKFFKMITGSWGISIILLTVFLKLLLYPLNAWSIRS
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHH
MRRMQKLSPYIQEIQQKYKKEPKRAQMEVMALYKTNKVNPITGCLPLLIQLPFLIAMFDL
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEHHCCCCCCHHHHHHHHHHHHHHHHHHHH
LKSSFLLRGASFIPGWIDNLTAPDVLFSWTTPVWFIGNEFHLLPILLGVVMFIQQKLSAL
HHHHHHHCCCCCCCHHHHCCCCCCEEEECCCCEEEECCCEEHHHHHHHHHHHHHHHHHHH
QKKGPVTDQQRQQEAMGTMMALLFTFMFYNFPSGLNIYWFSSMLLGLIQQWVTNKILDRQ
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
HLKNEITVNKKKQR
HHHCCCCCCCCCCC
>Mature Secondary Structure
MNKRSLLFVSLVGMAFVGCQIFFGYNDFRSCKALTEKQKTISEQVLAATKSMGLGVSPWT
CCCCHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
THPDEEVNKNHYAVCIGDRLLLLNQGNSASSVYSSGSRWDFIEETTACDNIHVALYGETG
CCCCHHCCCCEEEEEEECEEEEEECCCCHHHHHCCCCCCCCHHHCCCCCCEEEEEECCCC
KSTVPSHTGKVFLPVTSEALPVLVVEFRNNQEPIVFLGQYKQDEGKVYNKDSQVYGTSLV
CCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCEEEEECCCCCCCCEECCCCCEEEEEEE
FWRSGNEYLPLGIYNSKEERLESLDLPMTKAAIFSNSRETNTDTHSGQYFVLSNEYMQLV
EEECCCCEEEEEECCCHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCEEEEE
ISQESGAIEGINLPFSSEDSKSIVNEIGFDRDLKSQVPSEASFPGLPSVGPNNQIVSDTI
EECCCCCEEEECCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHC
GGYYPLLRRGILSDSKKRTPASYHALNIVSGRDLVNPVTSGYRVSVFNSNVLELESYDGS
CHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHCCCCEEEEEECCCEEEEECCCCC
IKKTYTFPEQQPYAFEVAVGLNRSSDDMWITSGVPEVEIMSNTFSPAIKYRVIKKNKGQL
CEEEEECCCCCCEEEEEEEECCCCCCCEEEECCCCCEEEECCCCCCCCEEEEEECCCCCC
DKVKLPKSKDPLSLRSGVYPQWILNSNGYFGIILSPLTDIPAGYAAAYVSGNSVPTRLSS
CEEECCCCCCCCHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCEEEEECCCCCHHHHHH
LYPKNQAYPASKYPGYETLLPLPKEEGTYRFLVYAGPLAEPTLKALDRAYTNPKGENSQY
CCCCCCCCCCCCCCCCCEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCE
LDCITFRGLFAFITEPFAALLFIIMKFFKMITGSWGISIILLTVFLKLLLYPLNAWSIRS
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHH
MRRMQKLSPYIQEIQQKYKKEPKRAQMEVMALYKTNKVNPITGCLPLLIQLPFLIAMFDL
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEHHCCCCCCHHHHHHHHHHHHHHHHHHHH
LKSSFLLRGASFIPGWIDNLTAPDVLFSWTTPVWFIGNEFHLLPILLGVVMFIQQKLSAL
HHHHHHHCCCCCCCHHHHCCCCCCEEEECCCCEEEECCCEEHHHHHHHHHHHHHHHHHHH
QKKGPVTDQQRQQEAMGTMMALLFTFMFYNFPSGLNIYWFSSMLLGLIQQWVTNKILDRQ
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
HLKNEITVNKKKQR
HHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12682364 [H]