| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62184972
Identifier: 62184972
GI number: 62184972
Start: 393822
End: 395228
Strand: Direct
Name: 62184972
Synonym: CAB341
Alternate gene names: NA
Gene position: 393822-395228 (Clockwise)
Preceding gene: 62184971
Following gene: 62184973
Centisome position: 34.41
GC content: 41.44
Gene sequence:
>1407_bases ATGATGAGTTCTAAGCGTACTTCGCAACTTGCAATGCTTTCCATTTTGTTAACTTTCACTCACTCTGTTGGTTACGCAAG TGCTACAGTTGCTCCTTTTGAAGTTAGCTCCACGTATTCTGAAGCTTCTTTAGTTGCTTCGGAAAGTCTAAAAAGTAGGA AAGAAATAAGAATTCAGAAGATACAAGAACGTAGACTTGCAAAAAAGAAATTAAAAGAATCCTCTGAAGAGCAAAAAAAT ACCGAAGATGCCGCAAGTCAGCCTAAAAAATTCGGTAAAATTACCGCCTTATTCACCAATAAGTTCAACAAGGAGCAAAG AGCTCGTTGTCAAGAACGTAAGAAACAGCGCCTTTCTTTTGCAGAGCGCTATCGTGCAAAAACTCAAGAACATAAAGAAG AGCAACGTTCCTTCGCTCAACAACTTAAGCAGAGTATCGACCTTTGCTGTGAAGAACTTCTGCAGCATGGAACGGAAAAT CTTTTAACTCGCAGTGGGAAATATTCACAAAGATACAATAAATTACGTAATTGTGAACAAACTGCCCAAGCAACTCATCC GTCCGCGAGTTCCGTACCTCATTTGTCAGCAAGACAAAAAGCTAAACTTAGAAAAAGAGCAGGTACATTAGTTCGCGCAG CTCCTCGGAGTGAGACACCACAGTCTTTGCTAAAAACAATGATTGTGAGTGGAGATGCCAAGATTTCTTCAGATAACGAA GAAGAAATTCGCGTTGTGCACAATATAAAAGATGGTCCTGTATTGCCTATTTTTGTTCGTCCTGATGTAAAAACAGTGGC GCAAGAAAAAAGAAATAAGCTGATACAAGATTTAGCTAGAGAGCAAAGAATTGCCAAGAGGAAATCTTCAAGAGAAGCTC TAGAAGCGCGCGCAAAAGAAAATAAAATCCTTAGAGGTGGGAAGATTACCTCTACCTTACGTTATGATGTTGAAAAAGCT GCAGCTGTTAAGGTTAGACGTAATTCGTCAGTTAATTCTCAGGTGCGAGCTCAAAAAGCATCAAATGAACGAAGAAACTC TCGTAACGAACACAACCCCCAAGACGCGGCTCAAAACTCTAAGCCCCGTTCTTCTGATAAGCAAGATCAACTGGCTAGCC ATACGCCTACCGATGATTACTATGGCGTAACTTCGGCAGCAGGAAATACCAACATCAATAGCTATCTAACTGCAAAACAG TATAGTTGTGACTCTTCCGAAACGGATTGGCCTTGCTCCTCATGTGTGGCTAAGCGTCGTACGCATACAAGCATTTCTGT ATGTACCATGGTGGTTACTGTGATTGCTATGATCATAGGAGCTATCATTATTGCTAATGCTTCAGATTCTACAACCGCTA ACGGTGGTGGAACAACAACTCCACCTGCGCCATCACCAGCTCCCTAA
Upstream 100 bases:
>100_bases AACTATCAATCTCTATAAAAGATTTGCAAGTCCAAGTTGTGAAAAAAGTCCTATTGTTGTTATGGTGATCTCATAGGCTG ATCTAGGAGATTATAGCAGC
Downstream 100 bases:
>100_bases AATGCATTTAGGGTACCAGGTATAGACGTAAGAGACAGAACTTCATTGGGTTCTGTCTATTTTTTTTCGTCTATGTACTT GGTTTATTCAATAGTTTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MMSSKRTSQLAMLSILLTFTHSVGYASATVAPFEVSSTYSEASLVASESLKSRKEIRIQKIQERRLAKKKLKESSEEQKN TEDAASQPKKFGKITALFTNKFNKEQRARCQERKKQRLSFAERYRAKTQEHKEEQRSFAQQLKQSIDLCCEELLQHGTEN LLTRSGKYSQRYNKLRNCEQTAQATHPSASSVPHLSARQKAKLRKRAGTLVRAAPRSETPQSLLKTMIVSGDAKISSDNE EEIRVVHNIKDGPVLPIFVRPDVKTVAQEKRNKLIQDLAREQRIAKRKSSREALEARAKENKILRGGKITSTLRYDVEKA AAVKVRRNSSVNSQVRAQKASNERRNSRNEHNPQDAAQNSKPRSSDKQDQLASHTPTDDYYGVTSAAGNTNINSYLTAKQ YSCDSSETDWPCSSCVAKRRTHTSISVCTMVVTVIAMIIGAIIIANASDSTTANGGGTTTPPAPSPAP
Sequences:
>Translated_468_residues MMSSKRTSQLAMLSILLTFTHSVGYASATVAPFEVSSTYSEASLVASESLKSRKEIRIQKIQERRLAKKKLKESSEEQKN TEDAASQPKKFGKITALFTNKFNKEQRARCQERKKQRLSFAERYRAKTQEHKEEQRSFAQQLKQSIDLCCEELLQHGTEN LLTRSGKYSQRYNKLRNCEQTAQATHPSASSVPHLSARQKAKLRKRAGTLVRAAPRSETPQSLLKTMIVSGDAKISSDNE EEIRVVHNIKDGPVLPIFVRPDVKTVAQEKRNKLIQDLAREQRIAKRKSSREALEARAKENKILRGGKITSTLRYDVEKA AAVKVRRNSSVNSQVRAQKASNERRNSRNEHNPQDAAQNSKPRSSDKQDQLASHTPTDDYYGVTSAAGNTNINSYLTAKQ YSCDSSETDWPCSSCVAKRRTHTSISVCTMVVTVIAMIIGAIIIANASDSTTANGGGTTTPPAPSPAP >Mature_468_residues MMSSKRTSQLAMLSILLTFTHSVGYASATVAPFEVSSTYSEASLVASESLKSRKEIRIQKIQERRLAKKKLKESSEEQKN TEDAASQPKKFGKITALFTNKFNKEQRARCQERKKQRLSFAERYRAKTQEHKEEQRSFAQQLKQSIDLCCEELLQHGTEN LLTRSGKYSQRYNKLRNCEQTAQATHPSASSVPHLSARQKAKLRKRAGTLVRAAPRSETPQSLLKTMIVSGDAKISSDNE EEIRVVHNIKDGPVLPIFVRPDVKTVAQEKRNKLIQDLAREQRIAKRKSSREALEARAKENKILRGGKITSTLRYDVEKA AAVKVRRNSSVNSQVRAQKASNERRNSRNEHNPQDAAQNSKPRSSDKQDQLASHTPTDDYYGVTSAAGNTNINSYLTAKQ YSCDSSETDWPCSSCVAKRRTHTSISVCTMVVTVIAMIIGAIIIANASDSTTANGGGTTTPPAPSPAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52066; Mature: 52066
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSSKRTSQLAMLSILLTFTHSVGYASATVAPFEVSSTYSEASLVASESLKSRKEIRIQK CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHH IQERRLAKKKLKESSEEQKNTEDAASQPKKFGKITALFTNKFNKEQRARCQERKKQRLSF HHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH AERYRAKTQEHKEEQRSFAQQLKQSIDLCCEELLQHGTENLLTRSGKYSQRYNKLRNCEQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHH TAQATHPSASSVPHLSARQKAKLRKRAGTLVRAAPRSETPQSLLKTMIVSGDAKISSDNE HHHHCCCCCCCCCCHHHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCH EEIRVVHNIKDGPVLPIFVRPDVKTVAQEKRNKLIQDLAREQRIAKRKSSREALEARAKE HHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NKILRGGKITSTLRYDVEKAAAVKVRRNSSVNSQVRAQKASNERRNSRNEHNPQDAAQNS CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCC KPRSSDKQDQLASHTPTDDYYGVTSAAGNTNINSYLTAKQYSCDSSETDWPCSSCVAKRR CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHEEHHHCCCCCCCCCCCHHHHHHHHH THTSISVCTMVVTVIAMIIGAIIIANASDSTTANGGGTTTPPAPSPAP CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MMSSKRTSQLAMLSILLTFTHSVGYASATVAPFEVSSTYSEASLVASESLKSRKEIRIQK CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHH IQERRLAKKKLKESSEEQKNTEDAASQPKKFGKITALFTNKFNKEQRARCQERKKQRLSF HHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH AERYRAKTQEHKEEQRSFAQQLKQSIDLCCEELLQHGTENLLTRSGKYSQRYNKLRNCEQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHH TAQATHPSASSVPHLSARQKAKLRKRAGTLVRAAPRSETPQSLLKTMIVSGDAKISSDNE HHHHCCCCCCCCCCHHHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCH EEIRVVHNIKDGPVLPIFVRPDVKTVAQEKRNKLIQDLAREQRIAKRKSSREALEARAKE HHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NKILRGGKITSTLRYDVEKAAAVKVRRNSSVNSQVRAQKASNERRNSRNEHNPQDAAQNS CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCC KPRSSDKQDQLASHTPTDDYYGVTSAAGNTNINSYLTAKQYSCDSSETDWPCSSCVAKRR CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHEEHHHCCCCCCCCCCCHHHHHHHHH THTSISVCTMVVTVIAMIIGAIIIANASDSTTANGGGTTTPPAPSPAP CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA