Definition Chlamydophila abortus S26/3, complete genome.
Accession NC_004552
Length 1,144,377

Click here to switch to the map view.

The map label for this gene is 62184972

Identifier: 62184972

GI number: 62184972

Start: 393822

End: 395228

Strand: Direct

Name: 62184972

Synonym: CAB341

Alternate gene names: NA

Gene position: 393822-395228 (Clockwise)

Preceding gene: 62184971

Following gene: 62184973

Centisome position: 34.41

GC content: 41.44

Gene sequence:

>1407_bases
ATGATGAGTTCTAAGCGTACTTCGCAACTTGCAATGCTTTCCATTTTGTTAACTTTCACTCACTCTGTTGGTTACGCAAG
TGCTACAGTTGCTCCTTTTGAAGTTAGCTCCACGTATTCTGAAGCTTCTTTAGTTGCTTCGGAAAGTCTAAAAAGTAGGA
AAGAAATAAGAATTCAGAAGATACAAGAACGTAGACTTGCAAAAAAGAAATTAAAAGAATCCTCTGAAGAGCAAAAAAAT
ACCGAAGATGCCGCAAGTCAGCCTAAAAAATTCGGTAAAATTACCGCCTTATTCACCAATAAGTTCAACAAGGAGCAAAG
AGCTCGTTGTCAAGAACGTAAGAAACAGCGCCTTTCTTTTGCAGAGCGCTATCGTGCAAAAACTCAAGAACATAAAGAAG
AGCAACGTTCCTTCGCTCAACAACTTAAGCAGAGTATCGACCTTTGCTGTGAAGAACTTCTGCAGCATGGAACGGAAAAT
CTTTTAACTCGCAGTGGGAAATATTCACAAAGATACAATAAATTACGTAATTGTGAACAAACTGCCCAAGCAACTCATCC
GTCCGCGAGTTCCGTACCTCATTTGTCAGCAAGACAAAAAGCTAAACTTAGAAAAAGAGCAGGTACATTAGTTCGCGCAG
CTCCTCGGAGTGAGACACCACAGTCTTTGCTAAAAACAATGATTGTGAGTGGAGATGCCAAGATTTCTTCAGATAACGAA
GAAGAAATTCGCGTTGTGCACAATATAAAAGATGGTCCTGTATTGCCTATTTTTGTTCGTCCTGATGTAAAAACAGTGGC
GCAAGAAAAAAGAAATAAGCTGATACAAGATTTAGCTAGAGAGCAAAGAATTGCCAAGAGGAAATCTTCAAGAGAAGCTC
TAGAAGCGCGCGCAAAAGAAAATAAAATCCTTAGAGGTGGGAAGATTACCTCTACCTTACGTTATGATGTTGAAAAAGCT
GCAGCTGTTAAGGTTAGACGTAATTCGTCAGTTAATTCTCAGGTGCGAGCTCAAAAAGCATCAAATGAACGAAGAAACTC
TCGTAACGAACACAACCCCCAAGACGCGGCTCAAAACTCTAAGCCCCGTTCTTCTGATAAGCAAGATCAACTGGCTAGCC
ATACGCCTACCGATGATTACTATGGCGTAACTTCGGCAGCAGGAAATACCAACATCAATAGCTATCTAACTGCAAAACAG
TATAGTTGTGACTCTTCCGAAACGGATTGGCCTTGCTCCTCATGTGTGGCTAAGCGTCGTACGCATACAAGCATTTCTGT
ATGTACCATGGTGGTTACTGTGATTGCTATGATCATAGGAGCTATCATTATTGCTAATGCTTCAGATTCTACAACCGCTA
ACGGTGGTGGAACAACAACTCCACCTGCGCCATCACCAGCTCCCTAA

Upstream 100 bases:

>100_bases
AACTATCAATCTCTATAAAAGATTTGCAAGTCCAAGTTGTGAAAAAAGTCCTATTGTTGTTATGGTGATCTCATAGGCTG
ATCTAGGAGATTATAGCAGC

Downstream 100 bases:

>100_bases
AATGCATTTAGGGTACCAGGTATAGACGTAAGAGACAGAACTTCATTGGGTTCTGTCTATTTTTTTTCGTCTATGTACTT
GGTTTATTCAATAGTTTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MMSSKRTSQLAMLSILLTFTHSVGYASATVAPFEVSSTYSEASLVASESLKSRKEIRIQKIQERRLAKKKLKESSEEQKN
TEDAASQPKKFGKITALFTNKFNKEQRARCQERKKQRLSFAERYRAKTQEHKEEQRSFAQQLKQSIDLCCEELLQHGTEN
LLTRSGKYSQRYNKLRNCEQTAQATHPSASSVPHLSARQKAKLRKRAGTLVRAAPRSETPQSLLKTMIVSGDAKISSDNE
EEIRVVHNIKDGPVLPIFVRPDVKTVAQEKRNKLIQDLAREQRIAKRKSSREALEARAKENKILRGGKITSTLRYDVEKA
AAVKVRRNSSVNSQVRAQKASNERRNSRNEHNPQDAAQNSKPRSSDKQDQLASHTPTDDYYGVTSAAGNTNINSYLTAKQ
YSCDSSETDWPCSSCVAKRRTHTSISVCTMVVTVIAMIIGAIIIANASDSTTANGGGTTTPPAPSPAP

Sequences:

>Translated_468_residues
MMSSKRTSQLAMLSILLTFTHSVGYASATVAPFEVSSTYSEASLVASESLKSRKEIRIQKIQERRLAKKKLKESSEEQKN
TEDAASQPKKFGKITALFTNKFNKEQRARCQERKKQRLSFAERYRAKTQEHKEEQRSFAQQLKQSIDLCCEELLQHGTEN
LLTRSGKYSQRYNKLRNCEQTAQATHPSASSVPHLSARQKAKLRKRAGTLVRAAPRSETPQSLLKTMIVSGDAKISSDNE
EEIRVVHNIKDGPVLPIFVRPDVKTVAQEKRNKLIQDLAREQRIAKRKSSREALEARAKENKILRGGKITSTLRYDVEKA
AAVKVRRNSSVNSQVRAQKASNERRNSRNEHNPQDAAQNSKPRSSDKQDQLASHTPTDDYYGVTSAAGNTNINSYLTAKQ
YSCDSSETDWPCSSCVAKRRTHTSISVCTMVVTVIAMIIGAIIIANASDSTTANGGGTTTPPAPSPAP
>Mature_468_residues
MMSSKRTSQLAMLSILLTFTHSVGYASATVAPFEVSSTYSEASLVASESLKSRKEIRIQKIQERRLAKKKLKESSEEQKN
TEDAASQPKKFGKITALFTNKFNKEQRARCQERKKQRLSFAERYRAKTQEHKEEQRSFAQQLKQSIDLCCEELLQHGTEN
LLTRSGKYSQRYNKLRNCEQTAQATHPSASSVPHLSARQKAKLRKRAGTLVRAAPRSETPQSLLKTMIVSGDAKISSDNE
EEIRVVHNIKDGPVLPIFVRPDVKTVAQEKRNKLIQDLAREQRIAKRKSSREALEARAKENKILRGGKITSTLRYDVEKA
AAVKVRRNSSVNSQVRAQKASNERRNSRNEHNPQDAAQNSKPRSSDKQDQLASHTPTDDYYGVTSAAGNTNINSYLTAKQ
YSCDSSETDWPCSSCVAKRRTHTSISVCTMVVTVIAMIIGAIIIANASDSTTANGGGTTTPPAPSPAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52066; Mature: 52066

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSSKRTSQLAMLSILLTFTHSVGYASATVAPFEVSSTYSEASLVASESLKSRKEIRIQK
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHH
IQERRLAKKKLKESSEEQKNTEDAASQPKKFGKITALFTNKFNKEQRARCQERKKQRLSF
HHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
AERYRAKTQEHKEEQRSFAQQLKQSIDLCCEELLQHGTENLLTRSGKYSQRYNKLRNCEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHH
TAQATHPSASSVPHLSARQKAKLRKRAGTLVRAAPRSETPQSLLKTMIVSGDAKISSDNE
HHHHCCCCCCCCCCHHHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCH
EEIRVVHNIKDGPVLPIFVRPDVKTVAQEKRNKLIQDLAREQRIAKRKSSREALEARAKE
HHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NKILRGGKITSTLRYDVEKAAAVKVRRNSSVNSQVRAQKASNERRNSRNEHNPQDAAQNS
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCC
KPRSSDKQDQLASHTPTDDYYGVTSAAGNTNINSYLTAKQYSCDSSETDWPCSSCVAKRR
CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHEEHHHCCCCCCCCCCCHHHHHHHHH
THTSISVCTMVVTVIAMIIGAIIIANASDSTTANGGGTTTPPAPSPAP
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMSSKRTSQLAMLSILLTFTHSVGYASATVAPFEVSSTYSEASLVASESLKSRKEIRIQK
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHH
IQERRLAKKKLKESSEEQKNTEDAASQPKKFGKITALFTNKFNKEQRARCQERKKQRLSF
HHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
AERYRAKTQEHKEEQRSFAQQLKQSIDLCCEELLQHGTENLLTRSGKYSQRYNKLRNCEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHH
TAQATHPSASSVPHLSARQKAKLRKRAGTLVRAAPRSETPQSLLKTMIVSGDAKISSDNE
HHHHCCCCCCCCCCHHHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCH
EEIRVVHNIKDGPVLPIFVRPDVKTVAQEKRNKLIQDLAREQRIAKRKSSREALEARAKE
HHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NKILRGGKITSTLRYDVEKAAAVKVRRNSSVNSQVRAQKASNERRNSRNEHNPQDAAQNS
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCC
KPRSSDKQDQLASHTPTDDYYGVTSAAGNTNINSYLTAKQYSCDSSETDWPCSSCVAKRR
CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHEEHHHCCCCCCCCCCCHHHHHHHHH
THTSISVCTMVVTVIAMIIGAIIIANASDSTTANGGGTTTPPAPSPAP
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA