| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62184929
Identifier: 62184929
GI number: 62184929
Start: 344865
End: 345734
Strand: Direct
Name: 62184929
Synonym: CAB297
Alternate gene names: NA
Gene position: 344865-345734 (Clockwise)
Preceding gene: 62184928
Following gene: 62184930
Centisome position: 30.14
GC content: 40.57
Gene sequence:
>870_bases ATGCTCCGTACAATAAAACAATTTTTTGTCTTTGAGAGCATTGCTATGAAGGTAATATTTTTTATCTCAGTTTTCTTTTC AGTATTTTCTTTAGAAGCAAGTATTATCAAAGTATCTGATATACACGCTGTGAATAAATACGCGAGAAAAGGTTCGTTGG TTTTATTAGGCTTGGACGAAACGCTCGTCTTCCCTAAACAAATGCTGGGAACCAGCTCTTGGTTTAACGAGCGTTTAGAA AATCTAAAAAAAGAACAGTCGGATTATGATCCTCTTGCTAAGGCTTTTTGCGAAAGAATCGCTGTGTCCTTTGCTGTAGA GTATGAGCTTATTCATCCTGAAGTTCCTAAAGCTATAGAAAGTTTAGCTTTATCCGAAGCTTGGGTCATGGGAGTGTCTC AATTTCCTATCCCTATGGCGAATCATTTTCTTCGTTCTGCCCAAGCTTTAGGTCTAATGTTTTCTTCCTGCTTACCCGCC CGGAGTGATGGGTGGATGCCACATCTTAAAACACTCGGTAGACCTCAACATGCGATGTTTATAGAAGAGCAAATACTCTT TACTGGAGGGCTGGTTAACGGCATCACCATGGAAGAAGTTCTTTCCACTTTATTTTCAACTTTAGACACATTGCCACAAC AAGTAATCTATTTGGATCAGAATCAGGAGAACCTGATTTCTGCAGAAGCCGCATGCAAACAAGCCAATGTGTATTTTATA GGGATGCTCTATAATCCAGCTGTAAAACGCGTCAAGAGCTATAAATCTGAAGTTGCTCACCTGCAATGGGTGCAATTGTG TAACCAACTCTCCGATAGGTATTTTCAGTCTTTGCTGACCTATGTCCTGGGTCCAGAGGGGCAAGGATAG
Upstream 100 bases:
>100_bases CTCTGTCCCCCTGAGAGGGTGCTTAGGGCCCTTTTTTAGTTTTACGAACATATTGAATCCTTAGATTGCTTTATATAAAA AACTATTTCTTCCTAAAGGG
Downstream 100 bases:
>100_bases CATCTTAAAAAAGTTAGGGAAAAGCCCTTAGAATAGACTACAGGGCTGATTCCCTAAAATTGCATTCTTTCAAATGACGG AAGAGAAGGGATTCGAACCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MLRTIKQFFVFESIAMKVIFFISVFFSVFSLEASIIKVSDIHAVNKYARKGSLVLLGLDETLVFPKQMLGTSSWFNERLE NLKKEQSDYDPLAKAFCERIAVSFAVEYELIHPEVPKAIESLALSEAWVMGVSQFPIPMANHFLRSAQALGLMFSSCLPA RSDGWMPHLKTLGRPQHAMFIEEQILFTGGLVNGITMEEVLSTLFSTLDTLPQQVIYLDQNQENLISAEAACKQANVYFI GMLYNPAVKRVKSYKSEVAHLQWVQLCNQLSDRYFQSLLTYVLGPEGQG
Sequences:
>Translated_289_residues MLRTIKQFFVFESIAMKVIFFISVFFSVFSLEASIIKVSDIHAVNKYARKGSLVLLGLDETLVFPKQMLGTSSWFNERLE NLKKEQSDYDPLAKAFCERIAVSFAVEYELIHPEVPKAIESLALSEAWVMGVSQFPIPMANHFLRSAQALGLMFSSCLPA RSDGWMPHLKTLGRPQHAMFIEEQILFTGGLVNGITMEEVLSTLFSTLDTLPQQVIYLDQNQENLISAEAACKQANVYFI GMLYNPAVKRVKSYKSEVAHLQWVQLCNQLSDRYFQSLLTYVLGPEGQG >Mature_289_residues MLRTIKQFFVFESIAMKVIFFISVFFSVFSLEASIIKVSDIHAVNKYARKGSLVLLGLDETLVFPKQMLGTSSWFNERLE NLKKEQSDYDPLAKAFCERIAVSFAVEYELIHPEVPKAIESLALSEAWVMGVSQFPIPMANHFLRSAQALGLMFSSCLPA RSDGWMPHLKTLGRPQHAMFIEEQILFTGGLVNGITMEEVLSTLFSTLDTLPQQVIYLDQNQENLISAEAACKQANVYFI GMLYNPAVKRVKSYKSEVAHLQWVQLCNQLSDRYFQSLLTYVLGPEGQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022565 [H]
Pfam domain/function: PF11019 DUF2608 [H]
EC number: NA
Molecular weight: Translated: 32654; Mature: 32654
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRTIKQFFVFESIAMKVIFFISVFFSVFSLEASIIKVSDIHAVNKYARKGSLVLLGLDE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCH TLVFPKQMLGTSSWFNERLENLKKEQSDYDPLAKAFCERIAVSFAVEYELIHPEVPKAIE HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEECCHHHHHHH SLALSEAWVMGVSQFPIPMANHFLRSAQALGLMFSSCLPARSDGWMPHLKTLGRPQHAMF HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHH IEEQILFTGGLVNGITMEEVLSTLFSTLDTLPQQVIYLDQNQENLISAEAACKQANVYFI HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHCCEEEE GMLYNPAVKRVKSYKSEVAHLQWVQLCNQLSDRYFQSLLTYVLGPEGQG EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLRTIKQFFVFESIAMKVIFFISVFFSVFSLEASIIKVSDIHAVNKYARKGSLVLLGLDE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCH TLVFPKQMLGTSSWFNERLENLKKEQSDYDPLAKAFCERIAVSFAVEYELIHPEVPKAIE HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEECCHHHHHHH SLALSEAWVMGVSQFPIPMANHFLRSAQALGLMFSSCLPARSDGWMPHLKTLGRPQHAMF HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHH IEEQILFTGGLVNGITMEEVLSTLFSTLDTLPQQVIYLDQNQENLISAEAACKQANVYFI HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHCCEEEE GMLYNPAVKRVKSYKSEVAHLQWVQLCNQLSDRYFQSLLTYVLGPEGQG EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]