| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62184924
Identifier: 62184924
GI number: 62184924
Start: 339749
End: 340180
Strand: Direct
Name: 62184924
Synonym: CAB292
Alternate gene names: NA
Gene position: 339749-340180 (Clockwise)
Preceding gene: 62184919
Following gene: 62184928
Centisome position: 29.69
GC content: 41.2
Gene sequence:
>432_bases ATGGCAGAACAAATTCATAAAGAGCTCTTACATTTAGGAGAGGTGTTTCGCACAAAACGCGAAGAACAGTCCTTATCTTT AAAAGATGTAGAAGCAGCGACATCCATACGTTACTCCTGTTTAGAAGCTATAGAAAACGGCTATTTAGGCAAGCTCATCT CTCCCATTTACGCTCAGGGATTTATCAAGAAATATGCCGCCTACTTAGGGCTAGATGGCGAGCGCATTCTCCAAGACCAT CCTTATGTTATGAAAATCTTCAAAGAATTTTCAGAGCATAATATGGAGATGCTGCTAGATTTAGAATCTATGGGAGGGAG AAATTCCCCAGAAAAAGCCATTCGTAGTTTGTCTAATCTTTGGTGGGCTGGACTTATCGTCTTCAGTGGTATGGCGATTT GGTGGTTGGGATCCCTACTTTCTCTTTTCTAA
Upstream 100 bases:
>100_bases TCTTGAAACAGAGGAAAGAGTCTTATTGTACAGAAAATAAGGCGAGAAGACTCTAGAAAGATCTAGAGTTTAGCATTTAG GTACCCGCAGAGGAATCTCT
Downstream 100 bases:
>100_bases TAGGTAGATAACCTCTGCTCAAGTACAAGGGGACAATTCGCCCCCGGATTTCTACCTATCTTCAAATTGCTACCCTAGAA ACGCTATGGAGCTGGAGACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MAEQIHKELLHLGEVFRTKREEQSLSLKDVEAATSIRYSCLEAIENGYLGKLISPIYAQGFIKKYAAYLGLDGERILQDH PYVMKIFKEFSEHNMEMLLDLESMGGRNSPEKAIRSLSNLWWAGLIVFSGMAIWWLGSLLSLF
Sequences:
>Translated_143_residues MAEQIHKELLHLGEVFRTKREEQSLSLKDVEAATSIRYSCLEAIENGYLGKLISPIYAQGFIKKYAAYLGLDGERILQDH PYVMKIFKEFSEHNMEMLLDLESMGGRNSPEKAIRSLSNLWWAGLIVFSGMAIWWLGSLLSLF >Mature_142_residues AEQIHKELLHLGEVFRTKREEQSLSLKDVEAATSIRYSCLEAIENGYLGKLISPIYAQGFIKKYAAYLGLDGERILQDHP YVMKIFKEFSEHNMEMLLDLESMGGRNSPEKAIRSLSNLWWAGLIVFSGMAIWWLGSLLSLF
Specific function: Unknown
COG id: COG1426
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16373; Mature: 16242
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEQIHKELLHLGEVFRTKREEQSLSLKDVEAATSIRYSCLEAIENGYLGKLISPIYAQG CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH FIKKYAAYLGLDGERILQDHPYVMKIFKEFSEHNMEMLLDLESMGGRNSPEKAIRSLSNL HHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHH WWAGLIVFSGMAIWWLGSLLSLF HHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure AEQIHKELLHLGEVFRTKREEQSLSLKDVEAATSIRYSCLEAIENGYLGKLISPIYAQG HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH FIKKYAAYLGLDGERILQDHPYVMKIFKEFSEHNMEMLLDLESMGGRNSPEKAIRSLSNL HHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHH WWAGLIVFSGMAIWWLGSLLSLF HHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA