| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62184898
Identifier: 62184898
GI number: 62184898
Start: 281837
End: 282508
Strand: Direct
Name: 62184898
Synonym: CAB257
Alternate gene names: NA
Gene position: 281837-282508 (Clockwise)
Preceding gene: 62184897
Following gene: 62184899
Centisome position: 24.63
GC content: 45.54
Gene sequence:
>672_bases GTGCCGGATATGTTTGGATCGTCTCCCTGTTGCCCTGGTTTCAAGGATAACCCGGACTATGTAAATATCCATTTTTATTG TTCTTGTTGCAAAGGGGTCGTGCAACCCAAAGAAGTTTCTGTGCTTGTTGTGGGTAGTGATGGGAAGGCGAGTGGTATAG CTCCTATTTTGCGATGTCAGAGTCATTTGATCGACGGCATGTGTTGTTCGGGGCCAATAACCACGTTATCGGGTTTGTAC CCTAAAGATGAAGAGGCTGTGCGTATACGTGAAAAGATGAAAAGCGTATATTTTCGGGTCCGCAACCTAGATCTATGCGC ATTGTTGCATTTTATCGGCGCAGGCGTACTATGCTTTTCAGGAGTGATTCTTGGGGTCATTGTTGCTTCCCCGGTAATCC CCGGTATGCACCAGTGGTTTTTCTCAGCAATTTTATTAGGCGTGGGTTTCATCCTATGTTTGATAGGAGCCATCTTCAGC TACTTTTCAAAGACGCGTGTACGGGAATGGTTAGATCTTTCACAGCATTATGTGGAACATTGTGAGCTTGTGCATGTACA AGCAGGTACAGAAAAATATGTGGTGCTGACAGAATTTCCCCCTTCGTGTCACTTGTTAGATCCTATATTAGCATCTCCGC CTCTGCATCCCACCGTTCTTCCCTTATTCTGA
Upstream 100 bases:
>100_bases GAGATTACTTTCTGTTATATAAGAATAGATTTGTTTTTATAAACTTTTATAATTTGATCTTTTCTATTCCTTTTGTTATT TTCTTTCTAATGATTTTAAG
Downstream 100 bases:
>100_bases ACTTATTCCCGCAGAATCTGCTTCTTCTTTTTCTTAATTTTCAAGATAGTTACAATTTCATTTTTACGCATATTTTAGGA CTGTTTGTGGTAAACGATGT
Product: putative inner membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MPDMFGSSPCCPGFKDNPDYVNIHFYCSCCKGVVQPKEVSVLVVGSDGKASGIAPILRCQSHLIDGMCCSGPITTLSGLY PKDEEAVRIREKMKSVYFRVRNLDLCALLHFIGAGVLCFSGVILGVIVASPVIPGMHQWFFSAILLGVGFILCLIGAIFS YFSKTRVREWLDLSQHYVEHCELVHVQAGTEKYVVLTEFPPSCHLLDPILASPPLHPTVLPLF
Sequences:
>Translated_223_residues MPDMFGSSPCCPGFKDNPDYVNIHFYCSCCKGVVQPKEVSVLVVGSDGKASGIAPILRCQSHLIDGMCCSGPITTLSGLY PKDEEAVRIREKMKSVYFRVRNLDLCALLHFIGAGVLCFSGVILGVIVASPVIPGMHQWFFSAILLGVGFILCLIGAIFS YFSKTRVREWLDLSQHYVEHCELVHVQAGTEKYVVLTEFPPSCHLLDPILASPPLHPTVLPLF >Mature_222_residues PDMFGSSPCCPGFKDNPDYVNIHFYCSCCKGVVQPKEVSVLVVGSDGKASGIAPILRCQSHLIDGMCCSGPITTLSGLYP KDEEAVRIREKMKSVYFRVRNLDLCALLHFIGAGVLCFSGVILGVIVASPVIPGMHQWFFSAILLGVGFILCLIGAIFSY FSKTRVREWLDLSQHYVEHCELVHVQAGTEKYVVLTEFPPSCHLLDPILASPPLHPTVLPLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24474; Mature: 24343
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 5.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDMFGSSPCCPGFKDNPDYVNIHFYCSCCKGVVQPKEVSVLVVGSDGKASGIAPILRCQ CCCCCCCCCCCCCCCCCCCEEEEEEEEEHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHH SHLIDGMCCSGPITTLSGLYPKDEEAVRIREKMKSVYFRVRNLDLCALLHFIGAGVLCFS HHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH GVILGVIVASPVIPGMHQWFFSAILLGVGFILCLIGAIFSYFSKTRVREWLDLSQHYVEH HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CELVHVQAGTEKYVVLTEFPPSCHLLDPILASPPLHPTVLPLF HHEEEEECCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure PDMFGSSPCCPGFKDNPDYVNIHFYCSCCKGVVQPKEVSVLVVGSDGKASGIAPILRCQ CCCCCCCCCCCCCCCCCCEEEEEEEEEHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHH SHLIDGMCCSGPITTLSGLYPKDEEAVRIREKMKSVYFRVRNLDLCALLHFIGAGVLCFS HHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH GVILGVIVASPVIPGMHQWFFSAILLGVGFILCLIGAIFSYFSKTRVREWLDLSQHYVEH HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CELVHVQAGTEKYVVLTEFPPSCHLLDPILASPPLHPTVLPLF HHEEEEECCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA