Click here to switch to the map view.

The map label for this gene is 62184762

Identifier: 62184762

GI number: 62184762

Start: 122987

End: 123889

Strand: Direct

Name: 62184762

Synonym: CAB117

Alternate gene names: NA

Gene position: 122987-123889 (Clockwise)

Preceding gene: 62184761

Following gene: 161501898

Centisome position: 10.75

GC content: 39.31

Gene sequence:

>903_bases
TTGCGGCGGCTCTTATTGGCAATTAAGCTGCATCTAACTTCTATGTGGTCTAGCAACTCCACCTGTTTTTCTTCAAATCA
TTACGACATATATTCAAGATCTATGCTTCTGTTGCTCTGTCGATGGAAAGATGCAGACATCATGGAATGGGAATACGCAT
GTACTGCTTTGGCAGATATTTGTAGCAAAATGAGTGGACAACTTCTCGCCAATAAATCAGAAGTTGTACAAGCAGCGCTT
CCTAACGAACAAGATATGCATGCGGAATGGACATATCGATTTTCAGCTTTAGAGAGAGAATTTGCATCTCGAGCTGAGAT
GAGAAATTCTGAAATTGAGAAGTTGAAAAATGAAAACAATTGGTTACAACATCGCCTTGCTGAGAAGTTGCAACAAGTTC
GTCACCAAAATGATATCATTGATGAGTTGAAACGCGATTTGGTGGAAAGTGTGCAACAAACAGAGATTAGTGAAGGAAGG
CGTCTCTGTTATGAACATAAAATTAAGATCCTCGAGGAACAGTTAGACAAGGTAACTTTATCTAAGATTCCTGAAACAGA
TATGTTTGAACAAAGGCATGCAGCATGTCTGTCACAAGAAGATCAAACTACAAAGTATCAAGAAGAAATAGCCAGGTTAA
ATCTCGAGCTGCAATGCTACAGAAATTCTGATTATACAAATGTAGAAGCAGAAAAGATCGTACAGATTCACGATGAATTA
GTACAAAAGAAGAAAGAGATAGCCCTCTTACACGATCTTGTTGAAGAGCAGCACTGCCATATACAGACTCTTAGTAAGCA
GTTGGGAGTCGAGGATGTTGTGCATGTGTCTCATTTAAAACAGCTGCTAGGAAGAGATTTGGACTGTAATCCATGTATGC
AGGAATCACAATGCGGTTCTTAG

Upstream 100 bases:

>100_bases
GGATTTTTCTGATTGCTTTTTCTTGGCTGTGAAGTTGAGACAATAACTCTCTCCTGTGCTATAAACCAGAAAAATCTAAT
TAATATCTTAGAGGTATCCT

Downstream 100 bases:

>100_bases
AAATCTTACCTAAGAATTTCTAGTTGTAATTATATAGAACTCACATAGAATAAACCCTACACATCCCATTAGGGGAACTT
TTTAGAAGCCTGTACACGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MRRLLLAIKLHLTSMWSSNSTCFSSNHYDIYSRSMLLLLCRWKDADIMEWEYACTALADICSKMSGQLLANKSEVVQAAL
PNEQDMHAEWTYRFSALEREFASRAEMRNSEIEKLKNENNWLQHRLAEKLQQVRHQNDIIDELKRDLVESVQQTEISEGR
RLCYEHKIKILEEQLDKVTLSKIPETDMFEQRHAACLSQEDQTTKYQEEIARLNLELQCYRNSDYTNVEAEKIVQIHDEL
VQKKKEIALLHDLVEEQHCHIQTLSKQLGVEDVVHVSHLKQLLGRDLDCNPCMQESQCGS

Sequences:

>Translated_300_residues
MRRLLLAIKLHLTSMWSSNSTCFSSNHYDIYSRSMLLLLCRWKDADIMEWEYACTALADICSKMSGQLLANKSEVVQAAL
PNEQDMHAEWTYRFSALEREFASRAEMRNSEIEKLKNENNWLQHRLAEKLQQVRHQNDIIDELKRDLVESVQQTEISEGR
RLCYEHKIKILEEQLDKVTLSKIPETDMFEQRHAACLSQEDQTTKYQEEIARLNLELQCYRNSDYTNVEAEKIVQIHDEL
VQKKKEIALLHDLVEEQHCHIQTLSKQLGVEDVVHVSHLKQLLGRDLDCNPCMQESQCGS
>Mature_300_residues
MRRLLLAIKLHLTSMWSSNSTCFSSNHYDIYSRSMLLLLCRWKDADIMEWEYACTALADICSKMSGQLLANKSEVVQAAL
PNEQDMHAEWTYRFSALEREFASRAEMRNSEIEKLKNENNWLQHRLAEKLQQVRHQNDIIDELKRDLVESVQQTEISEGR
RLCYEHKIKILEEQLDKVTLSKIPETDMFEQRHAACLSQEDQTTKYQEEIARLNLELQCYRNSDYTNVEAEKIVQIHDEL
VQKKKEIALLHDLVEEQHCHIQTLSKQLGVEDVVHVSHLKQLLGRDLDCNPCMQESQCGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35149; Mature: 35149

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLLLAIKLHLTSMWSSNSTCFSSNHYDIYSRSMLLLLCRWKDADIMEWEYACTALADI
CCHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
CSKMSGQLLANKSEVVQAALPNEQDMHAEWTYRFSALEREFASRAEMRNSEIEKLKNENN
HHHHCCHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
WLQHRLAEKLQQVRHQNDIIDELKRDLVESVQQTEISEGRRLCYEHKIKILEEQLDKVTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKIPETDMFEQRHAACLSQEDQTTKYQEEIARLNLELQCYRNSDYTNVEAEKIVQIHDEL
HHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHH
VQKKKEIALLHDLVEEQHCHIQTLSKQLGVEDVVHVSHLKQLLGRDLDCNPCMQESQCGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRRLLLAIKLHLTSMWSSNSTCFSSNHYDIYSRSMLLLLCRWKDADIMEWEYACTALADI
CCHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
CSKMSGQLLANKSEVVQAALPNEQDMHAEWTYRFSALEREFASRAEMRNSEIEKLKNENN
HHHHCCHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
WLQHRLAEKLQQVRHQNDIIDELKRDLVESVQQTEISEGRRLCYEHKIKILEEQLDKVTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKIPETDMFEQRHAACLSQEDQTTKYQEEIARLNLELQCYRNSDYTNVEAEKIVQIHDEL
HHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHH
VQKKKEIALLHDLVEEQHCHIQTLSKQLGVEDVVHVSHLKQLLGRDLDCNPCMQESQCGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA