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The map label for this gene is rplX

Identifier: 62184748

GI number: 62184748

Start: 113548

End: 113889

Strand: Direct

Name: rplX

Synonym: CAB103

Alternate gene names: 62184748

Gene position: 113548-113889 (Clockwise)

Preceding gene: 62184747

Following gene: 62184749

Centisome position: 9.92

GC content: 37.72

Gene sequence:

>342_bases
ATGAAAAGACGTAGTGTTTGTGTTGGCGACACTGTTTATGTGCTAGCCGGGAACGACAAAGGCAAACAAGGTAAAGTTTT
ATCTTGTCTCAGAGAAAAAAATAAAGTGGTCGTTGAAGGAGTCAACGTTCGTACGAAAAATATCAAGCGTAGTCAAGAAA
ATCCAAAAGGTAAAAGGATTAATATTGAAGCTCCGATACATATTTCTAACGTTCGTTTAAGTATAGATGGAGCTCCAGCA
AAACTTTCTGTCAAAGTTACTGAGAATGGACGAGAGTTGTGGAATAAGTCTTCTGATGGCACCTCTAAACTATATCGTTC
TGTGAAAGAGAGAAAAGGTTAA

Upstream 100 bases:

>100_bases
GAACACGAATTTTTGGTCCGATAGCTCGAGAAATTCGCGATCGTGGCTTTGTGAAAATTAGTTCTTTGGCTCCTGAGGTG
ATTTAAGGATAAGAAAAGAT

Downstream 100 bases:

>100_bases
TATGAGCAGGTTAAAAAAACTATATACCGAAGAGATCCGAAAGACCCTCCAAGAAAAGTTTGGATATAGCAATACCATGC
AAATCCCTGTTCTTAAAAAA

Product: 50S ribosomal protein L24

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MKRRSVCVGDTVYVLAGNDKGKQGKVLSCLREKNKVVVEGVNVRTKNIKRSQENPKGKRINIEAPIHISNVRLSIDGAPA
KLSVKVTENGRELWNKSSDGTSKLYRSVKERKG

Sequences:

>Translated_113_residues
MKRRSVCVGDTVYVLAGNDKGKQGKVLSCLREKNKVVVEGVNVRTKNIKRSQENPKGKRINIEAPIHISNVRLSIDGAPA
KLSVKVTENGRELWNKSSDGTSKLYRSVKERKG
>Mature_113_residues
MKRRSVCVGDTVYVLAGNDKGKQGKVLSCLREKNKVVVEGVNVRTKNIKRSQENPKGKRINIEAPIHISNVRLSIDGAPA
KLSVKVTENGRELWNKSSDGTSKLYRSVKERKG

Specific function: One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit

COG id: COG0198

COG function: function code J; Ribosomal protein L24

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L24P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL24_CHLAB (Q5L709)

Other databases:

- EMBL:   CR848038
- RefSeq:   YP_219533.1
- ProteinModelPortal:   Q5L709
- SMR:   Q5L709
- GeneID:   3337496
- GenomeReviews:   CR848038_GR
- KEGG:   cab:CAB103
- HOGENOM:   HBG588578
- OMA:   RTKNIKR
- ProtClustDB:   PRK00004
- BioCyc:   CABO218497:CAB103-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_01326_B
- InterPro:   IPR005824
- InterPro:   IPR003256
- InterPro:   IPR005825
- InterPro:   IPR014723
- InterPro:   IPR008991
- Gene3D:   G3DSA:2.30.30.200
- PANTHER:   PTHR12903
- SMART:   SM00739
- TIGRFAMs:   TIGR01079

Pfam domain/function: PF00467 KOW; SSF50104 Transl_SH3_like

EC number: NA

Molecular weight: Translated: 12546; Mature: 12546

Theoretical pI: Translated: 11.01; Mature: 11.01

Prosite motif: PS01108 RIBOSOMAL_L24

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRSVCVGDTVYVLAGNDKGKQGKVLSCLREKNKVVVEGVNVRTKNIKRSQENPKGKRI
CCCCCEEECCEEEEEECCCCCCCCHHHHHHHHCCEEEEEECCEEECCCCCCCCCCCCCEE
NIEAPIHISNVRLSIDGAPAKLSVKVTENGRELWNKSSDGTSKLYRSVKERKG
EEECCEEEEEEEEEECCCCEEEEEEECCCCHHHHCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKRRSVCVGDTVYVLAGNDKGKQGKVLSCLREKNKVVVEGVNVRTKNIKRSQENPKGKRI
CCCCCEEECCEEEEEECCCCCCCCHHHHHHHHCCEEEEEECCEEECCCCCCCCCCCCCEE
NIEAPIHISNVRLSIDGAPAKLSVKVTENGRELWNKSSDGTSKLYRSVKERKG
EEECCEEEEEEEEEECCCCEEEEEEECCCCHHHHCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA