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The map label for this gene is rpmC

Identifier: 62184745

GI number: 62184745

Start: 112668

End: 112886

Strand: Direct

Name: rpmC

Synonym: CAB100A

Alternate gene names: 62184745

Gene position: 112668-112886 (Clockwise)

Preceding gene: 62184744

Following gene: 62184746

Centisome position: 9.85

GC content: 36.53

Gene sequence:

>219_bases
ATGTCAGTAAAAAAGAAATTATTAGCTGAGCTTAGACAAAAAAGTCTAGTTGAGTTAGACGCGTTTATCCATGAAAATAA
GAAAGCTCTTTTTTCTTTAAGAGCCGAGGCCGCTTTGCAAAATAAAGCAGTGAAGACGCACTTGTTCTCTATGTATAAGA
AAACCATAGCTCGATCTATGACGGTCAAACAAGAAAAAGAAGGAAAAGTCGATGGCTAG

Upstream 100 bases:

>100_bases
TGTCTCAAGAGAAGATGCTCAAGACGCTTTAAGAAGAGCTGCAGCGAAATTGGGAATAAGAACACGTTTTGTTAAGCGGG
TTGAAAGGGTATAAGTTCAT

Downstream 100 bases:

>100_bases
TGAAGTAAGAGGCCTTAGAAAAACCAAGATTGGTGTTGTTGTCTCGTCAAAAATGGATAAAACCGTAGTTGTTCGAGTTG
AAAGGATATATTCTCATCCT

Product: 50S ribosomal protein L29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MSVKKKLLAELRQKSLVELDAFIHENKKALFSLRAEAALQNKAVKTHLFSMYKKTIARSMTVKQEKEGKVDG

Sequences:

>Translated_72_residues
MSVKKKLLAELRQKSLVELDAFIHENKKALFSLRAEAALQNKAVKTHLFSMYKKTIARSMTVKQEKEGKVDG
>Mature_71_residues
SVKKKLLAELRQKSLVELDAFIHENKKALFSLRAEAALQNKAVKTHLFSMYKKTIARSMTVKQEKEGKVDG

Specific function: Unknown

COG id: COG0255

COG function: function code J; Ribosomal protein L29

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL29_CHLAB (Q5L712)

Other databases:

- EMBL:   CR848038
- RefSeq:   YP_219530.1
- ProteinModelPortal:   Q5L712
- SMR:   Q5L712
- GeneID:   3338094
- GenomeReviews:   CR848038_GR
- HOGENOM:   HBG414103
- OMA:   DAFIHEN
- ProtClustDB:   PRK00306
- BioCyc:   CABO218497:CAB100A-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00374_B
- InterPro:   IPR001854
- Gene3D:   G3DSA:1.10.287.310
- TIGRFAMs:   TIGR00012

Pfam domain/function: PF00831 Ribosomal_L29; SSF46561 Ribosomal_L29

EC number: NA

Molecular weight: Translated: 8205; Mature: 8074

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVKKKLLAELRQKSLVELDAFIHENKKALFSLRAEAALQNKAVKTHLFSMYKKTIARSM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVKQEKEGKVDG
HHHHHCCCCCCC
>Mature Secondary Structure 
SVKKKLLAELRQKSLVELDAFIHENKKALFSLRAEAALQNKAVKTHLFSMYKKTIARSM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVKQEKEGKVDG
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA