| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62184653
Identifier: 62184653
GI number: 62184653
Start: 6841
End: 7944
Strand: Direct
Name: 62184653
Synonym: CAB006
Alternate gene names: NA
Gene position: 6841-7944 (Clockwise)
Preceding gene: 62184652
Following gene: 62184656
Centisome position: 0.6
GC content: 39.67
Gene sequence:
>1104_bases GTGCAGTCGCCTGTAGTGAAAACGAAAACATTAAGCAATATGCGAGAAATTCAACATTCGGAAGAACATTCTGCAATAAA GACGACAGGATCTGTTTTTTACCGTCGACATAGAAAAAACAGAGTTTATGTCTACGTGGTGCTAGCCTTAAGTATTGCTT TGTTCTGGAGTTTGCCCAAACCGTTTTATGAAAATATCCAAAAACGTTTCGTAGTTTGGTATTCGCGTGTTTTTATGCAC CACGCTGAAGTTTCTCCCCAAAGTTGTTCTCTCCAAGATACGGAGAACATCATCTTAAAAGATCGCATTGCTATTTTAGA AGAGCGTTTGCAAGCTTATGAGGTTGCTTATCATACGCCTCCTGTGTTTCCAGAGATTCTATCACCGTATTTTCGTAAGT TAATCACTAGTCGTGTGATTTACCGAGATCCTTCCCACTGGGGAAGTTCTTGTTGGGTAGATGTAGGTCGTGAACATAAC ATACAAAAAAACTCCTCAGTACTTTCTGGGAAGGTTCTTATCGGTCTTGTAGATTACGTGGGAGAAAAGCAGTCCCGCAT ACGTTTGATTACTGATGTAGGTATGCAACCTTCGGTGATCGCCGTTCGTGGAGGCATACAAGCTTGGTTAATAAAAGATC GGATTCAAGATCTGAGTAAACAAATAGAGCGCCTTTCAGATGCTTACATTCTAGAAAAAGATAAATATGAAAAAATCTAT CAGCTAGAAGAACTCAACGTATCTATACAATGCAGTGATGAAAATACCTTACTTTTGCGAGGGACATTATCAGGCAAAGG CGGTCCTTTATGGAAAGATGAAACTCTAACTTTACATGGAGAAGGATTTTGTTTTTCTGATGGTAAGGGGTTGTGTGTTG GGGATCTTTTAGTTACAACTGGACTCGATGGTGTCTTCCCTCCAGGATTGTTGGTTGCTGAAATTACCAAAGTTTGTCTA CCCCGAGAGGGAGCATGCTCTTATAAGATAGAAGCTAAATCACTTGCTGCTGATTTAATGAATCTTTCTTCTGTTTTGAT TCTTCCTGCTATGGAATTTAACCCTAATGATAGACCGGATATTTTTGGTTTATTGTGGGATTAG
Upstream 100 bases:
>100_bases ACACTGAAGTTTTCATTATGTTTTGTTTTATCTGTTAATATCATCAAACGATAAGTTACGCACTGAACAGCTACAGAAGC TCAATAAGGCTTCAGGTAGA
Downstream 100 bases:
>100_bases ATGTTTTGTAGTTGGGTAAGCAAAAAAATCCGTTTCCTGAAGAATCGGTACCCCGAATAAAAACAAATCCCATTTCTACG TCACTAGTAATATCAAATTG
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MQSPVVKTKTLSNMREIQHSEEHSAIKTTGSVFYRRHRKNRVYVYVVLALSIALFWSLPKPFYENIQKRFVVWYSRVFMH HAEVSPQSCSLQDTENIILKDRIAILEERLQAYEVAYHTPPVFPEILSPYFRKLITSRVIYRDPSHWGSSCWVDVGREHN IQKNSSVLSGKVLIGLVDYVGEKQSRIRLITDVGMQPSVIAVRGGIQAWLIKDRIQDLSKQIERLSDAYILEKDKYEKIY QLEELNVSIQCSDENTLLLRGTLSGKGGPLWKDETLTLHGEGFCFSDGKGLCVGDLLVTTGLDGVFPPGLLVAEITKVCL PREGACSYKIEAKSLAADLMNLSSVLILPAMEFNPNDRPDIFGLLWD
Sequences:
>Translated_367_residues MQSPVVKTKTLSNMREIQHSEEHSAIKTTGSVFYRRHRKNRVYVYVVLALSIALFWSLPKPFYENIQKRFVVWYSRVFMH HAEVSPQSCSLQDTENIILKDRIAILEERLQAYEVAYHTPPVFPEILSPYFRKLITSRVIYRDPSHWGSSCWVDVGREHN IQKNSSVLSGKVLIGLVDYVGEKQSRIRLITDVGMQPSVIAVRGGIQAWLIKDRIQDLSKQIERLSDAYILEKDKYEKIY QLEELNVSIQCSDENTLLLRGTLSGKGGPLWKDETLTLHGEGFCFSDGKGLCVGDLLVTTGLDGVFPPGLLVAEITKVCL PREGACSYKIEAKSLAADLMNLSSVLILPAMEFNPNDRPDIFGLLWD >Mature_367_residues MQSPVVKTKTLSNMREIQHSEEHSAIKTTGSVFYRRHRKNRVYVYVVLALSIALFWSLPKPFYENIQKRFVVWYSRVFMH HAEVSPQSCSLQDTENIILKDRIAILEERLQAYEVAYHTPPVFPEILSPYFRKLITSRVIYRDPSHWGSSCWVDVGREHN IQKNSSVLSGKVLIGLVDYVGEKQSRIRLITDVGMQPSVIAVRGGIQAWLIKDRIQDLSKQIERLSDAYILEKDKYEKIY QLEELNVSIQCSDENTLLLRGTLSGKGGPLWKDETLTLHGEGFCFSDGKGLCVGDLLVTTGLDGVFPPGLLVAEITKVCL PREGACSYKIEAKSLAADLMNLSSVLILPAMEFNPNDRPDIFGLLWD
Specific function: Unknown
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41649; Mature: 41649
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSPVVKTKTLSNMREIQHSEEHSAIKTTGSVFYRRHRKNRVYVYVVLALSIALFWSLPK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCC PFYENIQKRFVVWYSRVFMHHAEVSPQSCSLQDTENIILKDRIAILEERLQAYEVAYHTP HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC PVFPEILSPYFRKLITSRVIYRDPSHWGSSCWVDVGREHNIQKNSSVLSGKVLIGLVDYV CCCHHHHHHHHHHHHHHHHEECCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHH GEKQSRIRLITDVGMQPSVIAVRGGIQAWLIKDRIQDLSKQIERLSDAYILEKDKYEKIY CCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHH QLEELNVSIQCSDENTLLLRGTLSGKGGPLWKDETLTLHGEGFCFSDGKGLCVGDLLVTT HHHHCCEEEEECCCCEEEEEEEECCCCCCCCCCCEEEEECCEEEEECCCCCEEHHHHHHC GLDGVFPPGLLVAEITKVCLPREGACSYKIEAKSLAADLMNLSSVLILPAMEFNPNDRPD CCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHEEEEEEECCCCCCCCC IFGLLWD EEEEECC >Mature Secondary Structure MQSPVVKTKTLSNMREIQHSEEHSAIKTTGSVFYRRHRKNRVYVYVVLALSIALFWSLPK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCC PFYENIQKRFVVWYSRVFMHHAEVSPQSCSLQDTENIILKDRIAILEERLQAYEVAYHTP HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC PVFPEILSPYFRKLITSRVIYRDPSHWGSSCWVDVGREHNIQKNSSVLSGKVLIGLVDYV CCCHHHHHHHHHHHHHHHHEECCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHH GEKQSRIRLITDVGMQPSVIAVRGGIQAWLIKDRIQDLSKQIERLSDAYILEKDKYEKIY CCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHH QLEELNVSIQCSDENTLLLRGTLSGKGGPLWKDETLTLHGEGFCFSDGKGLCVGDLLVTT HHHHCCEEEEECCCCEEEEEEEECCCCCCCCCCCEEEEECCEEEEECCCCCEEHHHHHHC GLDGVFPPGLLVAEITKVCLPREGACSYKIEAKSLAADLMNLSSVLILPAMEFNPNDRPD CCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHEEEEEEECCCCCCCCC IFGLLWD EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA