Definition Bacteroides fragilis NCTC 9343 chromosome, complete genome.
Accession NC_003228
Length 5,205,140

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Identifier: 60683530

GI number:

Start: 4835567

End: 4837456

Strand: Direct

Name: Not Available

Synonym: BF4106

Alternate gene names: NA

Gene position: NA

Preceding gene: 60683529

Following gene: 60683531

Centisome position: NA

GC content: NA

Gene sequence:

>1890_bases
ATGAAGAAAAACCTGCTCGGCATTCTATTGGTATGCGCTTTTCTCAGTTCATCTTTACAAGCACAAGTCCGGAAAGATAC
GACACAAGCAGGGCATAATTATGAAATAGACGGCGTGGTAGTGACCGGCACGAGGAATGAAACCGATATCCGTCACCTGC
CAATGACAATCTCCGTGGTGAACCGTGAAACCATCAGGCAACGCTCCGAACCTTCCCTGCTCCCCACATTGACAGAACAG
GTTCCCGGATTGTTCACCACCAGTCGTGGCGTGATGGGATATGGAGTGTCAAACGGTGCGGCAGGCGGTATCAGCCTGCG
TGGTATAGGTGGCAGCCCCACTACAGGATTATTGGTATTGATTGACGGGCATCCCCAATACATGGGATTGATGGGACATC
CCATTGCTGATGCTTACCAATCGATGCTGGCCGAGAAAGTGGAAGTTGTGCGCGGCCCCGCATCCGTACTTTATGGCTCG
AATGCCATGGGTGGAGTAATCAACATCGTAACCCGCCGGCAACGGGAAGACGGAGTGAGAACCGGAGTCCGACTGGGATA
TGGTTCGTATGACACATGGATGACCGAAGCTACCAACCAAGTAAAAAAAGGACGTTTCAACAGCATTATCACCGGATCTT
ATAACCGGACAAACGGTCATCGCCCCAATATGGAATTTGAGCAATATGGGGGATATACGAGGTTGGGTTATGAACTGGAT
CACAGCTGGAACGTATCGGCCGATCTGAACCTGACACATTTCAATGCTTCCAATCCGGGAACTGTCAGTACACCGGTTTT
TGATAATGACTCGCGCATTACACGCGGCATGACTTCTTTTGCTCTGGAAAACAGATACGAACGTACATCGGGGGCACTCA
AGTTTTTCTATAATTGGGGCAAACATCACATTAATGACGGATATGGTACGGGAGAAGAACCGCTAGACTACCGCTTCAAT
TCCAAGGACCGGATGATGGGAATCTCCTGGTATCAGAGTGCCTCTTTATTTTCCGGCAACCGACTGACTGCAGGAATAGA
TTATATGCAATTCGGCGGTGAAGCCTGGAACCGTTTCATTGCGGACAAACATAAAGAAGGTATCTCGGATAAATCGGAAA
ATGAGATTGCCGGATATCTCGATTTCCGCCAGGCAATCGGCAGTTACCTGACAATGGATGCAGGGCTCCGTATAGATCAC
CACACCGTCACCGGAACGGAATGGATACCACAAGTCGGTTTGTCGGTACAATTGCCACAAGACGCAAGCCTGAAAGCAAT
GGCCAGTAAAGGATTCCGTAACCCAACGATTCGTGAACTGTATATGTTCCGACCGGCCAATCCCGACTTGTTGCCGGAAC
GGCTGTGGAATTACGAACTATCTTATTCACAACGCTTACTCAAAGGTACTTTTTATTACGGAGTCAACCTTTTTTACATC
AACGGGGACAATATGATTCAGACCATTCGCACAGACGGACGCCCACTGAACGTAAACACAGGCAAAGTCGAGAATTGGGG
AGCAGAAGCCGACATAGCATATCACATTCACCCCATGTGGAGACTGACAGCTAACTACAGTTGGCTTCATATGGAGCATC
CCCTGATAGCCGCACCCGAACATAAACTATATACAGGCATCGATTTCACACAGAAGAAATGGAGTTTCTCCACCGGAATA
CAATATGTGACAGGACTCTATACGGCAGTCGTCCCTCAGGAAAAGAAAGAAAACTTCCTCCTGTGGAATCTTCGCGGCAG
TTATCGCATTTGCTCTATTGCCGACCTGTTTGTAAAAGGGGAGAATCTGCTGGCACAACGTTATGAAATAAACGCAGGTT
ACCCCATGCCGAAAGCTACATGTATGGGAGGAATTAATATTAACTTTTAA

Upstream 100 bases:

>100_bases
GGATAAAAGCGGATGGTGTCCGTTGGAAACAGCTTGCTATGGAATAGAATCCATACAGGAAATATTCCGGATCATCGAAA
ACTTCCTTTCCAAGATCAGG

Downstream 100 bases:

>100_bases
TTATTACATCATAATTATGGAAACAACATCTATCAAGCTTTATTCATTGAATTACAATGATACGAAAACGTATCTGGCAA
CACTGCTATTCGTAGTGGGC

Product: putative TonB-dependent outer membrane receptor protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>629_residues
MKKNLLGILLVCAFLSSSLQAQVRKDTTQAGHNYEIDGVVVTGTRNETDIRHLPMTISVVNRETIRQRSEPSLLPTLTEQ
VPGLFTTSRGVMGYGVSNGAAGGISLRGIGGSPTTGLLVLIDGHPQYMGLMGHPIADAYQSMLAEKVEVVRGPASVLYGS
NAMGGVINIVTRRQREDGVRTGVRLGYGSYDTWMTEATNQVKKGRFNSIITGSYNRTNGHRPNMEFEQYGGYTRLGYELD
HSWNVSADLNLTHFNASNPGTVSTPVFDNDSRITRGMTSFALENRYERTSGALKFFYNWGKHHINDGYGTGEEPLDYRFN
SKDRMMGISWYQSASLFSGNRLTAGIDYMQFGGEAWNRFIADKHKEGISDKSENEIAGYLDFRQAIGSYLTMDAGLRIDH
HTVTGTEWIPQVGLSVQLPQDASLKAMASKGFRNPTIRELYMFRPANPDLLPERLWNYELSYSQRLLKGTFYYGVNLFYI
NGDNMIQTIRTDGRPLNVNTGKVENWGAEADIAYHIHPMWRLTANYSWLHMEHPLIAAPEHKLYTGIDFTQKKWSFSTGI
QYVTGLYTAVVPQEKKENFLLWNLRGSYRICSIADLFVKGENLLAQRYEINAGYPMPKATCMGGININF

Sequences:
NA

Specific function: NA

COG id: COG4771

COG function: function code P; Outer membrane receptor for ferrienterochelin and colicins

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA