Definition Bacteroides fragilis NCTC 9343 chromosome, complete genome.
Accession NC_003228
Length 5,205,140

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Identifier: 60683490

GI number:

Start: 4781654

End: 4784650

Strand: Direct

Name: Not Available

Synonym: BF4062

Alternate gene names: NA

Gene position: NA

Preceding gene: 60683489

Following gene: 60683491

Centisome position: NA

GC content: NA

Gene sequence:

>2997_bases
ATGAATAACATTTTAAAACAAGCGGGAGCAATTCTGTCGCTCTCGCTATTGTGTGGGATGCAGGTTTATGCGTTCCCTGA
CTACCCTTCCCTGAGGGGACAAATTATCGAACAGAGTGATATCTGTCAAGGAGTTGTCAAAGATGCCAATGGCGAAAGCA
TTATCGGCGCATCCGTACTTGTCAAAGGGACGACAAACGGCAGCATTACGGGACTTGACGGTGATTTTTCCCTTAGGAAC
GTAAAAAAAGGGGATATAATTGTTGTTTCTTATGTCGGCTATCAGAGCCAGGAAATAGCCTGGACAGGTGAACCGTTAAA
CATCGTTTTGAAGGAAGATGCCGAAGTCCTTGACGAGGTGGTTGTTATTGGCTATGGTGCTGTAAGAAAAGCGGATATGG
CCGGTTCCGTAGCCGTGCTGGACAACAAAAATTTCAAGGACCAGCCTATAACCCAGGTTGCAGACGCTCTTCAGGGGCGT
GTCAGTGGCGTTCATGTTGAGAACAGCGGCGTCCCCGGGGGAAGCGTGAAAATCCGCATCCGCGGTGCTAACTCCATCAG
CAAAAGCAACGACCCTTTGTATGTGGTTGACGGAATCGTCCGCGAAAGCGGTTTGGACGGTATCAATCCTGAGGACATCC
GTTCGATGCAGGTTCTCAAAGATGCATCGTCCACTGCCATATACGGTTCCAGGGGTTCGAACGGGGTCGTTCTGATCACT
ACCAAGAGTGGTAAGGCCGGTGTGCGTGAAATTATGTTCGACGCATCAGTGGGAGTTTCCAATGTATATAAGAGATACGA
TATCCTTGGAGCATACGATTACGCTCTGGCGCTCAAGGAGGTCAAAGGTATTGATTTCTCAAACGAAGAGATGCAATCCT
ATCAGAACGGAACGGCGGGCATCGACTGGCAGGATGAGATTTTCCGTACGGGGATCACCCAGAATTACAAGTTGGCTCTT
TCCAATGGTAGCGAGAAGACCCAATATTACATTTCCGCCAACTACATGAGCCAGGAAGGTGTGGTCATTGAATCGAAGAA
CGAGCGTTATCAGGCGAAGGCGAATCTTTCCTCACAGCTTACCGACTGGCTGCATATCACGGCTGACATCAATGCTTCCC
ACGGTGTGCGTCGCGGGGGATCTTTTGCCTCCGGTAAGGATAATCCGATCTGGATTGCTTTGAACTATTCGCCTACCATG
ACGATGATGGCCGAAAACGGGAACTATAACACCGATACTTATAATTCCATAGCTTCCAACCCGGTCGGTATCCTAAAGTT
GCAGTCGGGAGAGACAATGACCAATGTTTTCAACGGACGTGTTGATTTGCGCCTTGATATAATGAAGGGGCTGACATTCA
CCACAACCAATGGCGTGGACTATTATGACGAGAAAAGTTATAGTTTCAGCTCCAAACGAGTGGGGACCAAGAGTGGTATG
GGCAACAATGACACTTACCGCCTGATGCTGCAGAGTTCCAACAACCTGACATATACGGGTTCTTGGAACGACCATCATCT
GACAGCCACGGCCGTATATGAGGTGACCTCCTCCGAAACCAGGACAATGGGTATAACCGGTAACAACCTGCTGACCGAGG
GTGTGGGCTGGTGGAATGTGGGTATGGCTTCCTCTCGTGATGCAAACAATGGTTACGAGCAATGGGCGCTGATGTCGGGA
GTGGCCCGTGTCATGTACAATTTTAAGGATCGTTATATGCTTACCGGAACATTTCGTGCCGACGGTTCTTCTCGCTTTGC
CAAAAAGAAATGGGGGTACTTTCCTTCTATTGCCGCAGCTTGGACGTTGAGCAATGAGGATTTCATGAAGGATGTTTCCT
CGGTTCAGGACATTAAACTTCGCGCCAGTTATGGTATTGTGGGTAGCCAGGCCATCAGTCCTTACGCAACCATGGGCCTT
ATGAGTGCTACTGCATACAATTTTGGAACCAACAGTAATTTTACCGGTTATTGGGCAAATGACATAGCAACTCCCGAGCT
TACGTGGGAGAAGACCAAGCAGTTCGACCTGGGCCTGGAGTTCTCCCTGTTCGACAGGCGGCTGAATTTCAGTGTGGACT
ATTTCTATAAGCGTACTACAGATGCGTTGCTTAAAAGAAGTATCCCCGGATATGTCGGCGGTAACTCTTTTTGGGTGAAT
GACGGCGAAATCAGTAATCGTGGTATTGATTTGAGCGTGACCGCCCGGATTATGCAGAATGACCGGTTCCAATGGACCTC
CACCTTGAACGGTACTTATTTGAAGAACCGCGTGGAACGCCTTTCCGGTGGTGAGAATGATTTCATCAACGGCTCCAGTC
CGGCTGCCGGTATGGTTGATTATGCCACCATTATCAAGCCGGGTGAGGCCATCGGTACTTTTTGGGGATATGAATGGACC
GGCTTGGATGAAAAGGGACATGACACTTACACGGATGTAGATGGAAATCAGATGATAGACGGTGGCGACCGCAAGGTCAT
CGGCAAGGCCAATCCCGATTTCACCCTGGGATGGAATAACTCCCTGTCTTATAAAAACTGGGATCTGAACCTGTTCTTCA
ACGGATCTTTCGGAGCCAAGCGTTTGAATCTTGTAAGATATACTATGGCTTCGGCCGAAGGGAATTCCCGCTTTGTAACT
CTGGCAGACGCCTATCTGAAGGGATTCGACAAGATTGGCTCTTCGGCAACATACCCGAGCCTGACCGAAGGTGGAAATAA
TCTGCAGCCGGTTTCAACCAAATGGCTGGAGAACGCGGACTTCCTTCGTTTGGAGAATATCAGTCTTTCATACACTTTCC
CCAAAAAGACAACGGGATTCGCTGATTTGCGGCTTACTTTCAGCTGTCAGAACCTTTTTACAATAACCGGGTACAAGGGG
ATGGATCCGGCCGGTACTACCTTCTCGAACAGCAGCGTTGACGTTGACGCGGGTATTGACATGGGAGCCTATCCTTCCCC
AAGAACATTCACATTCGGTCTCCGGATGAATTTTTAA

Upstream 100 bases:

>100_bases
TTTTAGTGTGTTCAATCAAAGAAATACGAATAGGGGGGGATTTTAGTTTTTTGATAAAGTATAACGCTGAAATAGTTTTT
TATCTTTTAATAAACAATCT

Downstream 100 bases:

>100_bases
ATCTAAAATAGAAGAACTTATGAAAATAAAAATAATAGCAGGCACTATGGTTGCCCTGTCATTTTCACTGATGTCGTGCA
GTGATTTCTTAACGGAAGAT

Product: putative TonB-linked outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>998_residues
MNNILKQAGAILSLSLLCGMQVYAFPDYPSLRGQIIEQSDICQGVVKDANGESIIGASVLVKGTTNGSITGLDGDFSLRN
VKKGDIIVVSYVGYQSQEIAWTGEPLNIVLKEDAEVLDEVVVIGYGAVRKADMAGSVAVLDNKNFKDQPITQVADALQGR
VSGVHVENSGVPGGSVKIRIRGANSISKSNDPLYVVDGIVRESGLDGINPEDIRSMQVLKDASSTAIYGSRGSNGVVLIT
TKSGKAGVREIMFDASVGVSNVYKRYDILGAYDYALALKEVKGIDFSNEEMQSYQNGTAGIDWQDEIFRTGITQNYKLAL
SNGSEKTQYYISANYMSQEGVVIESKNERYQAKANLSSQLTDWLHITADINASHGVRRGGSFASGKDNPIWIALNYSPTM
TMMAENGNYNTDTYNSIASNPVGILKLQSGETMTNVFNGRVDLRLDIMKGLTFTTTNGVDYYDEKSYSFSSKRVGTKSGM
GNNDTYRLMLQSSNNLTYTGSWNDHHLTATAVYEVTSSETRTMGITGNNLLTEGVGWWNVGMASSRDANNGYEQWALMSG
VARVMYNFKDRYMLTGTFRADGSSRFAKKKWGYFPSIAAAWTLSNEDFMKDVSSVQDIKLRASYGIVGSQAISPYATMGL
MSATAYNFGTNSNFTGYWANDIATPELTWEKTKQFDLGLEFSLFDRRLNFSVDYFYKRTTDALLKRSIPGYVGGNSFWVN
DGEISNRGIDLSVTARIMQNDRFQWTSTLNGTYLKNRVERLSGGENDFINGSSPAAGMVDYATIIKPGEAIGTFWGYEWT
GLDEKGHDTYTDVDGNQMIDGGDRKVIGKANPDFTLGWNNSLSYKNWDLNLFFNGSFGAKRLNLVRYTMASAEGNSRFVT
LADAYLKGFDKIGSSATYPSLTEGGNNLQPVSTKWLENADFLRLENISLSYTFPKKTTGFADLRLTFSCQNLFTITGYKG
MDPAGTTFSNSSVDVDAGIDMGAYPSPRTFTFGLRMNF

Sequences:
NA

Specific function: NA

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA