Definition Bacteroides fragilis NCTC 9343 chromosome, complete genome.
Accession NC_003228
Length 5,205,140

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Identifier: 60681296

GI number:

Start: 2094629

End: 2097799

Strand: Direct

Name: Not Available

Synonym: BF1804

Alternate gene names: NA

Gene position: NA

Preceding gene: 60681293

Following gene: 60681297

Centisome position: NA

GC content: NA

Gene sequence:

>3171_bases
ATGAAAAAAGTCCTTTTTATTTTGTTGGGCTGTTTGCTATCGTTTAATGTGATGGCACAGGTAAAGGCGATTTCGGGACT
GGTAACAGATGTTACTGGGGAGCCCGTTATTGGGGCAAGTGTTGTAGAAGTGGGAACCACTAATGGAGTAATTACTGATT
TAAACGGTAAGTTCTCGTTAAAGGTGGCACCTAATTCACAATTCTTGGTGAGCTATATTGGCTACAAGCAACAAACAATT
AAAGTTGGCTCTGAAAGCACTTATAATATTGTGCTGAAAGAGGATGCGGAGGTTTTGGATGAAGTTGTTGTAGTCGGTTA
TGGTTCGCAAAAGAAGGTGAACGTTACAGGGGCTGTAGGTATGGTTAGTGCCGAGGCGTTGGAAGCGCGTCCGGTGGCAA
ATGCTTCACAAGCATTGCAGGGTGTTGTTCCCGGCTTGAACCTTACTGTTGGTAATAACGGTGGCGCCCTTGATGGAACG
TTAAACATGAATATTCGTGGAGCCGGAACGATTGGTGATGGATCGGGTTCATCCCCACTGGTTTTGATTGATGGCATTGA
GGGGGATTTGAATACTGTCAATCCCAATGATATCGAATCTGTTTCGGTATTGAAGGATGCTGCATCCGCTTCTATTTATG
GTGCAAGAGCTTCATTCGGTGTAATTCTTGTAACAACGAAGAGTGGTAAGAGCGGTAAGACCAATGTGTCATATAGCGGT
AGTGCTCGTTTCTCAGACGCTATTGGTGTACCGGATATTATGGATTCTTACACTTTTGCTCAGTACTTCAATCGTGCTTC
TGCCAATAAGGGTGGTGGTGACATTTTTGCCCCTGCTGTAATGGAGCGTATCAAAGCTTATCAAGAGGGAACGCTGAAAG
CTACTACTGTTGATAATGGAGCAGGCATTTGGCAAAAATGGGCTAACGCGAATGGAGATACGGATTGGTTTGAAGAATTC
TATGATCATTGGGCACCATCTCAGGAGCATAATCTTAGTATTAATGGTGGTACGGATAAGACTCAATACCTGATCAGCGG
AAGTTTCCTGGATCAGAAAGGTTTGATGCGTCATGGAAAAGACAAATTTCAACGCTACACGCTGAACGGTAAGATTACAA
CGGCTGTCACTGATTGGTTTAAGGTGACATATTCTACTAAATGGACCCGTGAGGATTTTGAGCGTCCTTCTTATCTGACC
GGAAACTTTTTCCATAACTTAGCTCGTAAATGGCCTGTACATCCGGCTTATGATCCGAATGGATTCCCTATGGATGAGGG
TGAAGTGGAGCAGATGGAAAATGGTGGAAAGCAAAACAGTCAGAAAGATTTTTATACGAATCAGTTGCAACTGGTTTTCG
AACCTATTAAAAACTGGAAAATCAATCTTGACGGTAGTGTACGTACCACTACTCAATATCAGCATTGGGAAGTATTGCCT
GTTTATGCTTATAATGTAGCCGGAGATCCTTATTATACAGTGTGGGATATGGGATATGGTTCTTATGCGGCAGGTTCTTC
TCGAGTGAATGAATATAGTTGGAAGGAAAATTATTATACTACAAATATTTATTCGGATTATTTCAAGCAGTTCGATAACG
GACATTATTTTAAAGTGATGGCCGGTTTTAATGCAGAGTTATATAAAACCAGAAACATTACGGCTGAAAAAAATACTTTG
ATTACCCCGGGGGTACCTACTATTAATACGGCAACTGATGATCCGCAGGCTTATGGTGGTTATGCTGACAACTCAGTAGC
CGGTTTCTTTGCGCGTGTTAACTGGAGTTATAAAGACCGTTATATGTTTGAGGCTAATGGTCGATATGATGGTTCTTCCC
GCTTCGTAGGAAAAGAACGTTGGGGATTCTTCCCATCATTCTCTGCCGGTTGGAATATTGCTCGCGAACCATTTATGGAA
AGTTTTGCTGAAAAGATCAATATGGGAAGTTTAAAGTTGAGAGCTTCTTGGGGGCAGCTGGGTAATACGAATACCAATGA
TGCGTGGTATCCATTTTATCAAACGATGCCTGTAGGGTCTAATTACGGCTGGCTAGTAAATGGCGAACGTCCTAACTATG
CTACAAATCCGGGTATTGTCAGCTCTAAGAAAACTTGGGAGACAGTGGAGACTTGGGATGTCGGTTTGGATTGGTCTTTC
TTCAATAACCGTTTATCCGGTTCATTCGACTATTTCGTACGTTATACTTATGATATGATCGGCCCGGCTCCCGAACTTTC
AAGTTTGTTGGGAACTTCAGTTCCGAAGATTAACAACTCGGACATGAAATCGTATGGTTTTGAGTTGGAGGTAAATTGGA
GAGATCGGATCGGTGAAGTTTCTTATGGAGCAAAATTTGTACTTTCTGATGACCAACAGAAGATTCTGCGCTATCCGAAT
GACTCGTATGATGTAGGTTCGTATTATAAAGGTGAACATTTGAACGATATTTGGGGATTGACAACAATCGGTATTGCTAA
ATCACAGGAAGAGATGGATGCTCATTTGGCAAAAGTCGATCAATCTTCTGTTGGAACCAATTGGGGTGTCGGTGATATTA
TGTATGCCGATTTGGATGGTGACGGAAAAATCAGTAACGGAACCAATAAATTAGGAGATACGGGCGATTATCGTATTATC
GGTAATTCGACTCCTCGTTTTAAATATGGTATTACACTGGATGCTGCCTGGAAAGGATTCGATTTCAGCATTTTTATGCA
GGGGATCGGAAAACGTGACCTATGGCTGGACGGATGTTATTTCTGGGGAGCCAACGGACAAGGAAATGAGTGGCAGTCTA
CCGGCTTTGCCGAACATTGGGATTTCTTCCGTCCGGAGGGTGACCCGTTAGGTGCTAATTTGAATTCATATTATCCGCGC
GTCAACTTTAGTGGGGATCGTAATACCAAGGTTCAGACGCGTTATTTACAGAATGGGGCATATCTGCGTTTGAAGAATGT
TCAGTTGGGTTATACATTGCCTCGGGTATGGACAGAGAAAGCCGGAATATCTTCTGTACGTGTATATGTTTCGGGTGATA
ACCTGGCAACTATAACCAGTCTTTCTAAGATTTTCGATCCGGAAGCTACCGGAAGTTTGGCCGGAACAGGATCCGGTAAG
TTGTATCCTTTGCAAAGAGTGATATCTGTTGGTGTTAACGTTAATTTTTAA

Upstream 100 bases:

>100_bases
AAAGGATAAGTCCCGATAGGACTGTACTCATTTTCAGGTATTTATATTTATGGAGTTTAGAAGAGATAATTTTCCTTTTT
TATTAACTAAAAATCAATTT

Downstream 100 bases:

>100_bases
ATTGAAGTATTATGAAGCTTAAAATAAAAAATCTGTTTGTACAAGCATGTTTTGTTGCGGGAGGGGTAATGGCGCTCACG
TCCTGTAATGACTTTCTTGA

Product: putative TonB-dependent outer membrane receptor protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1056_residues
MKKVLFILLGCLLSFNVMAQVKAISGLVTDVTGEPVIGASVVEVGTTNGVITDLNGKFSLKVAPNSQFLVSYIGYKQQTI
KVGSESTYNIVLKEDAEVLDEVVVVGYGSQKKVNVTGAVGMVSAEALEARPVANASQALQGVVPGLNLTVGNNGGALDGT
LNMNIRGAGTIGDGSGSSPLVLIDGIEGDLNTVNPNDIESVSVLKDAASASIYGARASFGVILVTTKSGKSGKTNVSYSG
SARFSDAIGVPDIMDSYTFAQYFNRASANKGGGDIFAPAVMERIKAYQEGTLKATTVDNGAGIWQKWANANGDTDWFEEF
YDHWAPSQEHNLSINGGTDKTQYLISGSFLDQKGLMRHGKDKFQRYTLNGKITTAVTDWFKVTYSTKWTREDFERPSYLT
GNFFHNLARKWPVHPAYDPNGFPMDEGEVEQMENGGKQNSQKDFYTNQLQLVFEPIKNWKINLDGSVRTTTQYQHWEVLP
VYAYNVAGDPYYTVWDMGYGSYAAGSSRVNEYSWKENYYTTNIYSDYFKQFDNGHYFKVMAGFNAELYKTRNITAEKNTL
ITPGVPTINTATDDPQAYGGYADNSVAGFFARVNWSYKDRYMFEANGRYDGSSRFVGKERWGFFPSFSAGWNIAREPFME
SFAEKINMGSLKLRASWGQLGNTNTNDAWYPFYQTMPVGSNYGWLVNGERPNYATNPGIVSSKKTWETVETWDVGLDWSF
FNNRLSGSFDYFVRYTYDMIGPAPELSSLLGTSVPKINNSDMKSYGFELEVNWRDRIGEVSYGAKFVLSDDQQKILRYPN
DSYDVGSYYKGEHLNDIWGLTTIGIAKSQEEMDAHLAKVDQSSVGTNWGVGDIMYADLDGDGKISNGTNKLGDTGDYRII
GNSTPRFKYGITLDAAWKGFDFSIFMQGIGKRDLWLDGCYFWGANGQGNEWQSTGFAEHWDFFRPEGDPLGANLNSYYPR
VNFSGDRNTKVQTRYLQNGAYLRLKNVQLGYTLPRVWTEKAGISSVRVYVSGDNLATITSLSKIFDPEATGSLAGTGSGK
LYPLQRVISVGVNVNF

Sequences:
NA

Specific function: NA

COG id: COG4771

COG function: function code P; Outer membrane receptor for ferrienterochelin and colicins

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA