Definition Bacteroides fragilis NCTC 9343 chromosome, complete genome.
Accession NC_003228
Length 5,205,140

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Identifier: 60681211

GI number:

Start: 2005661

End: 2008930

Strand: Direct

Name: Not Available

Synonym: BF1719

Alternate gene names: NA

Gene position: NA

Preceding gene: 60681210

Following gene: 60681212

Centisome position: NA

GC content: NA

Gene sequence:

>3270_bases
ATGAAGAAAACCATCTTCTTGATTTTGTGCATTTTATGTTCTCTTGGGGCCATGGCGCAAAAGAAATCTATCACGGGTGT
GATTACAGATGGTGCCGGTGAGTCAATCATTGGTGCAAGTGTCGTTGAAGTTGGTACAACTAATGGTACCATAACTGACT
TTGACGGCAAGTTCTCTTTAACGATAGCTACTGGTGCTAAATTTACAGTTAGCTATATTGGGTATAAATCTCAGACGATT
ACTGTTGGTGCTGAAAATACCTATAATATAGTACTGAAGGAAGACACAGAAGTGTTGGATGAAGTAGTGATAACAGGATA
TGGAGGTTCACAAAAGCGTGCTACTTTGACTACTGCTATCTCTAAATTGGATAACTCGGTACTTAAAAATGCGGCTTTCA
GCAACGCAGGACAATCCTTGCAAGGCTCTGTAACAGGACTCCGTGTTGTTAACAAAACAGGTCAACCCGGTAGTGAACCG
GATATTACATTACGTGGTGGTGCCACTATTACAGGTGATAATAGTAAAGCACTTATCGTAGTTGATGGTATTGTCCGCAA
TAGCATGAGCGATATCAATCCTTCCGATATTGAGTCGATTCAAGTCCTTAAAGATGCTGCTTCAACCGCTATTTATGGAG
CGCGTGCCAATGGCGGTGTTATTTTGGTTGAGACTAAAAGTGGTAAAGAAGGTAAAGCATCTGTTAACTATAAATTCAAA
ATGGGTGTGAATTTCGCTCGTAAAGGTTATGACTTTTGCGATGCGCACGACTACATCTACTACAATCGTTTAGGTTACAA
AAGAACCGGACGTACCAATGTAGATACACAAATGGGATATGGTATTGGTAACAATCTATTTGACATCCGTTATTTGACAG
ATGAAAACGCTAACTTAAAGAATGAAGGTTGGGCTTCTATGGCAGACCCATTTTATGATGGAAAAACAATTCTATATAAA
GACTACTCAGGTGAGTTGGATGATGTTGTTTTCAATAATAGCGCTTTGACACAAGACCATTATGTAAACATTACAGGCGG
TAACGATAAAGGAACCTTCTCTGCCAGCCTAGGCTATTACAAAGAAGATGGTCAGATTAGAGGTACCGGATACGAACGTT
TCAATGGAGCATTGAACGGTTCGTATAAAGTATTCCCTTTTTTGACGGTAAAGGCAAATGCGACTTACTCTTGGTCAACT
CAACCGGAACTCTGGATCGGTCAATATGAATTTTTCTACCGTACACGCTCTCAACGTCCGACATGGAATCCTTGGAATGA
AGATGGAACTCCGGCCTCCGGTTTCGGTACAGGAGACGGTAATCCCGATTATTACAGAGATAAGTTGACGAGCGAGAACA
GCACTAATAAATCAACCTACAGTGTTGGATTTGCCCTTGACATTTTACCTAAAAAATTAGTGTTAAATGGCAATGCTTCA
CTTTATCGTTATGACTGGCAGAGAGAGAAGTTTAATAAATCTTATCAAGCTCAATCTTCCGCAACTCCTGACAATACACG
CCAGGCTGAGGCTTATGTTCAGAAATACAATCAAATTCAGTTGAACGGAACACTGACATACACAGATACTTTTGCAGAAA
AGCATAATCTGGAAGCAATGTTAGGAACCGAATATTTCACTTATGATCAGTTCGATTTTGAAGCTAAAACTCAAAATTCT
CCGACTGATGATATTCCTACCTTAAACGCAGGCTCTACAAGAACTTATACTTCAACAACCAAAACAGCATATCGTATTCT
TTCCGGATTCGGACGTATTAACTATAACTACGATATGAGATATTTAATTTCGTTTGTTGCTCGTTATGACGGTATTTCGA
AACTGAAAGATAATCGTTGGGGATTCTTCCCGGGTGTGTCTGTCGGTTGGAATATTATGGAAGAAAGATTCTGGAAAGAC
TCTAAGATATCAGGAGTTATTTCTAACTTGAAACCCCGTTTGAGCTATGGTGTCAATGGAAATGTGAATGGAATCGGAAA
TTTTGATGTATATGGTGCATATTCACAAGTAGGCGCAAAAACATACGGAGGTTCAACCGCATTCTACAATTCAGGTTTGG
TAAACACTGGATTACGTTGGGAACAAAGTCAGTCATTTGAAGCAGGACTTGACATCGGATTCTTAAATAATCGTTTGAGC
TTTATCTTCGACTATTATAACCGTACTACAAAGGATTTGTTAACCAAACAAGCTCTTCCGGGATATACCGGTTTCACGGA
AATCATGACCAATATGGGAACTCTGCGTAATTATGGTTTTGAAATGGAAGTCAGAGCTAATATTCTGAATAATCCGAAAG
GGTTAACATGGGATGTAACAGCCAACTTGTCTTCTGTTGCAAACAAGATCGTAAAATTGCCCTACAATGGTAACCCCAAT
AATCGTGTTGGTGGTTATGAAGTAGCAACCGGACGTAAAAAAGCCGATGGAACAGATGAAACCAAATGGATCGCCGGTCG
TCAGGAAGGTGGTAAACTGGGAGAACTAGTTGCCTATAAACAAAACCACATATTCAAAGATTGGGATGATGTGAAAAAAT
ATGCCAATAATCGTATCGATGAGGTAGCCAACTTATATGGTCCGGGACTTGCAGCCCAATATGCCGGAAAAGAGGGATGG
CAACCTATCGAACCGGGTGATGTTTGCTGGGAAGACATTAATGGCGATGGTGTTATTAATGGATACGACCGTCAAGTAGT
AGGAAATATATTCCCAAAAGTTACCGGTGGATTCTCTACTACATTGGGTTATAAAAACCTCTCCTTATATGCCCGTTTCG
ATTATGCTTTAGGACATACGATTTATAATGACCTTGCAGCACGTTCATTGGGGCAATATCAAGGTTCGTTCAACATCATT
AAAGAAGTTAAAAAAACATGGAGTGAAACAAATACCGATACTGATCTGCCTGCATTCTATTATGCCGACCAGTTAAGTAA
GAAGAATATAACACGTTCAAATAATGGTCTTACGGCTATTGACAATAACAGTTCACGTTTCTATGAAAAAGGTGACTATT
TGGCCCTTCGTGAACTGACATTGAACTATAATCTGCCTAAAACATGGATTAGTAAAGTAGGCATGACAGATGCCTCAGTT
TATGTAACAGGTCAGAATCTATTCTATATCACCGGATACACAGGCGTTTCACCTGAACCGGCTGTAGATACGACTTATGG
CCGTGGAATAGATAACGGCCGTTATCCTACTCCGAGAACAGTTTTATTCGGTTTGTCAGTGACATTCTAA

Upstream 100 bases:

>100_bases
ATTTTATTACGTATTTTTTCTCCATTTTCGCCTACCGTCCCGATAGAACTTAGTAAAAACAATTATAATTTTCTTTATTA
TTAACTAAAAAGCAATACTT

Downstream 100 bases:

>100_bases
TTATATATGACTAATACAAATAGCATTATGAAGAAAATATTTACATATATGTTAGCAGGGCTTTCTCTCCTGCTGTTTTC
AAGATGTGATGCGCTGGATA

Product: putative outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1089_residues
MKKTIFLILCILCSLGAMAQKKSITGVITDGAGESIIGASVVEVGTTNGTITDFDGKFSLTIATGAKFTVSYIGYKSQTI
TVGAENTYNIVLKEDTEVLDEVVITGYGGSQKRATLTTAISKLDNSVLKNAAFSNAGQSLQGSVTGLRVVNKTGQPGSEP
DITLRGGATITGDNSKALIVVDGIVRNSMSDINPSDIESIQVLKDAASTAIYGARANGGVILVETKSGKEGKASVNYKFK
MGVNFARKGYDFCDAHDYIYYNRLGYKRTGRTNVDTQMGYGIGNNLFDIRYLTDENANLKNEGWASMADPFYDGKTILYK
DYSGELDDVVFNNSALTQDHYVNITGGNDKGTFSASLGYYKEDGQIRGTGYERFNGALNGSYKVFPFLTVKANATYSWST
QPELWIGQYEFFYRTRSQRPTWNPWNEDGTPASGFGTGDGNPDYYRDKLTSENSTNKSTYSVGFALDILPKKLVLNGNAS
LYRYDWQREKFNKSYQAQSSATPDNTRQAEAYVQKYNQIQLNGTLTYTDTFAEKHNLEAMLGTEYFTYDQFDFEAKTQNS
PTDDIPTLNAGSTRTYTSTTKTAYRILSGFGRINYNYDMRYLISFVARYDGISKLKDNRWGFFPGVSVGWNIMEERFWKD
SKISGVISNLKPRLSYGVNGNVNGIGNFDVYGAYSQVGAKTYGGSTAFYNSGLVNTGLRWEQSQSFEAGLDIGFLNNRLS
FIFDYYNRTTKDLLTKQALPGYTGFTEIMTNMGTLRNYGFEMEVRANILNNPKGLTWDVTANLSSVANKIVKLPYNGNPN
NRVGGYEVATGRKKADGTDETKWIAGRQEGGKLGELVAYKQNHIFKDWDDVKKYANNRIDEVANLYGPGLAAQYAGKEGW
QPIEPGDVCWEDINGDGVINGYDRQVVGNIFPKVTGGFSTTLGYKNLSLYARFDYALGHTIYNDLAARSLGQYQGSFNII
KEVKKTWSETNTDTDLPAFYYADQLSKKNITRSNNGLTAIDNNSSRFYEKGDYLALRELTLNYNLPKTWISKVGMTDASV
YVTGQNLFYITGYTGVSPEPAVDTTYGRGIDNGRYPTPRTVLFGLSVTF

Sequences:
NA

Specific function: NA

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA