Definition Bacteroides fragilis NCTC 9343 chromosome, complete genome.
Accession NC_003228
Length 5,205,140

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Identifier: 60681014

GI number:

Start: 1771472

End: 1774855

Strand: Reverse

Name: Not Available

Synonym: BF1512

Alternate gene names: NA

Gene position: NA

Preceding gene: 60681015

Following gene: 60681013

Centisome position: NA

GC content: NA

Gene sequence:

>3384_bases
ATGGATTTTAATTCCTACAAAAAAGTTATTTCAAACTGTAACCATATCGTTAAAGTTGGTATGGTTTCGGCTTATGCTCT
TTTTTTAGGCGTAAATACTGCCCTGGCGAGTGTAACCGAGTACATGGATCAAAAAGTATCCCTTAAGACACAGAATTATA
CCATTGAATCTGTGATTCAACAAGTTGAGAAACAAACGGATTATTTGTTTGTATATGACAAGAACGATGTGGACGTAAAA
CGCACCGTATATGTAAATGGAAGCAATACCGATGTAATAGAGCTGCTGAAAGGCATCTTTGACAACACCGATATTGATTG
CAAGGTGCTAGGTAACAATATAACTCTCTCTAAAATTACTAACGTAGCGACTAGAATTGCTCAACAAGACAAGAAAACAG
CCAAAGGTAACGTTATCGATTCTACTGGTGAACCGGTAATCGGTGCTTCAGTAGTAGAGCAAGGTACTACCAACGGCACT
GTGACCGACATCAACGGTAACTTTACACTGAATTTGAGTACCCCAAATGCCAAAATTGAAATTTCTTTCATCGGCTACAA
AACTCAGGTACTGACTGCACAATTTGGCAAACAGATGGCTGTAAAGCTGGTGGACGATACCGAATTACTGGACGAAGTTG
TTGTAGTAGGTTACGGTTCGCAGAAGAAAGTTAACATGACCGGCGCTGTTGCTACGATTGACTCTAAATCATTGGCTTCT
AGACCAATATCCAATATATCTCAGGGATTGCAAGGTTTAGCACCGGGTGTAACTGTAACCAATGCCGGCGGTCAGCCAGG
TCAGGATACCGGTAAAATTCTAATCCGTGGTTTGGGTTCATTCAATGCTTCTTCTCCGATGGTTTTGATTGACGGTGTAG
AAGGCGATATGAACGTGGTTGACCCGAGCGATATCGAAAGCATCTCTGTATTGAAGGATGCTTCTTCAGCTGCCATCTAC
GGTTCTAAAGCTGCTAACGGTGTAATCTTGATTACTACCAAGCGCGGACAGAGTGGTAAACCCAAATTGACTTACAGTGC
TTTGTTCGGATGGTCAAAACCTGCCGATTTGATGGACCGTACCAACTCTGCTGAATTGGCTGAATTGACCAATGAAGCTG
AATACTGGGATGCCATCTCTCAAGGCGCTTCTTCTGAACAAGCTGAAAAGAGAAAACCCTACACTCAAGAAGACATCCGT
AAATATGCCGAGGGTTCTGACCCATACGGTCATCCCAACACTGACTGGTACGACTTGTTCTATACCGGCTCTGGTTTCAT
GAACCGCCATAACATAGGTATGGACGGTGGTTCTGAATGGGCGAAGTATAGAGCTTCCCTGGGTTATGTAAAACAAGAAG
GTATCGTTGAAAACGCTTCTAACAGACAGTTCAATGTTCGTACCAACTTAGATCTGAAGCTGACTGAACGCTTGAAATCA
AGAATCAATCTGGACTTCGCTAATACATTGATGAAAGAGCCTACTGACCCGATTTCTTGGTCAGACGGTGCTGCTTATCA
AGTATTCAGACAAGTAAACCGTATCTCTCCGATGGTTCCTTACAAAAATGAAGATGGTACTTATGGTGCCATTGCCGATG
GTAACCCCATTGCATTCCAAGACTTGGGTTCTACCGGTGATACAGACAAAGATTACTTGAATGCTTTCGCTGAATTTTCA
TACGATATCTGGGACGGTTTGAAAATTACCGCCAACGGTTCTTATAACATAGTGAACAAGAGTTACAAGCTGTACAGAAA
AGACTTGCAATATAATGCAAACAAATACGACGGTCCAATCCGCCTGACTAAGAGCCACACTAAGGAAATCCGCAGACAAG
GTGATATCTTGTTGAACTACGACAAGACCTTCGCCCAGAAGCACACCGTAAACACTTTGGCTGGTTTCCACACAGAACTC
TATTCTTATGAATATGATGATGCTTACAGACAAAACTTCCCGTCATCAGACGTAACTGATATGAATGGTGGTTCAGTAGT
AGGTATGAGAAACTCTGGTTATACTCGTGAACTAGCAATGAATTCTGTATTCGGCCGCTTGAAATACAACTACATGGACA
AATATCTGTTCGAAGCTAACGCGAGAGGTGACGGTTCTTCCCGTTTTGCAGAAGGCAACCGTTGGGGATGGTTCCCCTCA
TTCTCAGGTGCTTGGCGCGTAACTAACGAAGATTTTATACAAGGTACTGCTTTCAACGAAGTAGTAACCGACATGAAAGT
AAGAGGTTCTTGGGGAATGCTCGGTAACCAACAGATTGGTAACGACTACTATCCGTACATCAATACATATGCTACCAACG
CGAAATATCCATTCGACAACAAGGTAAGCGGTGGTGCAGTACAAACTGAAAATAAAATCCAGGATATCTCTTGGGAAAAG
ACTACTACTTGGGGTGCAGCTGTAGACATGACTTTATTCAACGAACTGCAGGTCACTTTGGAATACTACAACAGAAAGAC
AACTGGTATCTTGATGCAGGTAAATGTACCGAATACTTATGGGTATCCTGGTTACTGGGACAATGTGGGAGCTATGAGAA
ACCAAGGACTTGAGGTTTCTTTGGCTTGGCATAAAACACTGGGTGGAGTTCAGCTGAACTTTGGCGGTAACTTTACTTAC
AACAAGAACGAAATTTTATCACTGGGTAATGTAGACGTTCAGAAAGATGCCCGTACTATTCGCATGGTAGGTAAGGAATT
TAATGCCTTCTATGGTTACAAATCAGACGGTATCTTCCAAAGCAAGGAAGAAATAGCAAATGCTCCGAAATACACAATGA
TAAGCAACGACCGTTTAATTCCTGGTGATATCAAATTGGTAGACATAAACGGAGATGGTGAAATCAACCCTGATGATAAG
GTAATCTTGAGCTCAGAAAACCCGAAATATACTTTCGCATTCAATCTGGGTGCCAGATGGAAAATGTTTGACATCAACTT
GTTCTTCCAAGGTGCCGCTGGCGTATCACGCTACTTCACTGATGAATTCTACGGTGAATTTAACGGTGACTCTGGTCATC
CTTCAAATCACTGGTTAGGCCGCTGGACCCCGGAAAACCCAACCAACAAATGGCCTAGAGCTTCTAAATTCAGAACATAT
AACTTGCCGGAAACTACCTGTTCAGACTTCTGGTTGGTAAATACCAACTACTTGCGTCTGAAAGATATCCAAGTTGGTTT
CAATGTTCCTAAAGAATGGCTGCAAGCTGTACGCTTGGGATCTGCTAGAATTTACTATAGCGGTACTAACCTGCTTACAT
TCAGCAAGACTCCTCAAGGTATCGACCCTGAAGCTCCGGCAGGATGGGGTGCATACTATCCGCACGTGAAGACTCACTCT
ATTGGTATTAATATTACATTATAA

Upstream 100 bases:

>100_bases
TATTGTAGCGTAACGTAAGGCGGTTCCGAAAATAATACCGCCCGTGGCTTGAAGCCATCTGATCTTAAACAAAATACTAA
TGATTAAATTAAAGTAAATT

Downstream 100 bases:

>100_bases
TTTAGCAACTATGAGAAATATATATTTGTCACTTATTTCAGGTCTCTTATTCACAGCTTGTTCGCTGGATAGAGTGCCGT
ACGATGCCTTATCTACCGCT

Product: putative outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1127_residues
MDFNSYKKVISNCNHIVKVGMVSAYALFLGVNTALASVTEYMDQKVSLKTQNYTIESVIQQVEKQTDYLFVYDKNDVDVK
RTVYVNGSNTDVIELLKGIFDNTDIDCKVLGNNITLSKITNVATRIAQQDKKTAKGNVIDSTGEPVIGASVVEQGTTNGT
VTDINGNFTLNLSTPNAKIEISFIGYKTQVLTAQFGKQMAVKLVDDTELLDEVVVVGYGSQKKVNMTGAVATIDSKSLAS
RPISNISQGLQGLAPGVTVTNAGGQPGQDTGKILIRGLGSFNASSPMVLIDGVEGDMNVVDPSDIESISVLKDASSAAIY
GSKAANGVILITTKRGQSGKPKLTYSALFGWSKPADLMDRTNSAELAELTNEAEYWDAISQGASSEQAEKRKPYTQEDIR
KYAEGSDPYGHPNTDWYDLFYTGSGFMNRHNIGMDGGSEWAKYRASLGYVKQEGIVENASNRQFNVRTNLDLKLTERLKS
RINLDFANTLMKEPTDPISWSDGAAYQVFRQVNRISPMVPYKNEDGTYGAIADGNPIAFQDLGSTGDTDKDYLNAFAEFS
YDIWDGLKITANGSYNIVNKSYKLYRKDLQYNANKYDGPIRLTKSHTKEIRRQGDILLNYDKTFAQKHTVNTLAGFHTEL
YSYEYDDAYRQNFPSSDVTDMNGGSVVGMRNSGYTRELAMNSVFGRLKYNYMDKYLFEANARGDGSSRFAEGNRWGWFPS
FSGAWRVTNEDFIQGTAFNEVVTDMKVRGSWGMLGNQQIGNDYYPYINTYATNAKYPFDNKVSGGAVQTENKIQDISWEK
TTTWGAAVDMTLFNELQVTLEYYNRKTTGILMQVNVPNTYGYPGYWDNVGAMRNQGLEVSLAWHKTLGGVQLNFGGNFTY
NKNEILSLGNVDVQKDARTIRMVGKEFNAFYGYKSDGIFQSKEEIANAPKYTMISNDRLIPGDIKLVDINGDGEINPDDK
VILSSENPKYTFAFNLGARWKMFDINLFFQGAAGVSRYFTDEFYGEFNGDSGHPSNHWLGRWTPENPTNKWPRASKFRTY
NLPETTCSDFWLVNTNYLRLKDIQVGFNVPKEWLQAVRLGSARIYYSGTNLLTFSKTPQGIDPEAPAGWGAYYPHVKTHS
IGINITL

Sequences:
NA

Specific function: NA

COG id: COG4771

COG function: function code P; Outer membrane receptor for ferrienterochelin and colicins

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA