| Definition | Bacteroides fragilis NCTC 9343 chromosome, complete genome. |
|---|---|
| Accession | NC_003228 |
| Length | 5,205,140 |
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Identifier: 60680960
GI number:
Start: 1727125
End: 1729476
Strand: Direct
Name: Not Available
Synonym: BF1457
Alternate gene names: NA
Gene position: NA
Preceding gene: 60680959
Following gene: 60680961
Centisome position: NA
GC content: NA
Gene sequence:
>2352_bases TTGTCAGCAGTAACAAATCATAAACAACTTATTGTCATGGAGGTAAACAAGAAAAAACTTAAAGAACAAGAGATACGCAC TCTGTTAATTACTCCTGCACTTCAACAAAAAGGGTGGGCAGTAAGCATAAATATGCGTGAAGAATACTATTTTACGGACG GTCGAGTACTTGTTGTTGGCAACCAGCACTCAGTAGCAGAGGGTAAAAAGGCTGATTATCTATTGTACCACAACGGTAAA CCTATCGCAGTGGTTGAAGCAAAAGACAACAAGCACACTGTTGGAAGTGGTATGCAGCAAGCTATGGATTATGCTTTAAT CCTTGACTTGAAATTTGCATACTCCAGTAATGGTGATGCTTTCTTGGAACATGACTTTATCACAGGTAAAGAAACTGAGA TTAAGTTAGAAGACTTCCCGACAGAAGAGGAGCTGTACAACCGTTATCTTGCATCCAAAAACTATACTCCTGATGAACTT AATATTATAGAGACCCCATTCTACTATGATGCCCATAGTCATGAGCCAAGATATTACCAACGTATAGCCGTTGACCGCAC TGTTGAAGCCATAGCAAAAGGGCAACAACGTGTACTTGTGGTAATGGCTACCGGTACGGGTAAGACTTTTACGGCATTCC AGATAATCCATAGGCTCCATAAGAGTGGAGCAAAGAAGAAAATCCTTTATCTTGCAGATCGCAATATCCTTATAGACCAA ACTATGACTCAGGATTTCAAGCCATTCAAGAAGTTTATGACTAAGATAACTTCAGTTGGAGAGGGTGAAGAAAAAATTGA TTCATCGTATGAGATGTATATGGCTCTGTATCATCAGTTGGTTGGAAAAGAAGGTAGGCCCGACCCCTTCTTGGAAGTTC GGCCAAACTTCTTTGACTTGATTATAGTTGATGAGTGTCACCGAGGAAGTGCCAAGGACGATTCAGCATGGCGCAAAGTT TTGGAATATTTCAATACGGCTACTCAAATAGGTATGACAGCTACTCCTAAAGCCGATGAAGGGGCGAATAACCTTGATTA TTTCGGTGAACCTGTGTATACCTACTCGCTACTTCAAGGTATCAACGATGGCTTTTTGGCTCCGTATAGGGTTACTGCTG ACTTTATCAACGTTGACCTGCAAGGCTGGACTCCTGAAGAGGGTGAGATAGATTTGTTAGGTAAGGAGATTGAGCAGAAA TTATATCAAAGACAAAATATAGGGCGTGACCTTGCTATTAAGTTAAGACGCAAGGTTGTAGCAAACAGAATTACCAAAAT GCTGCATGACATCGGTCGTATGACAAAAACGATTGTATTCTGTTCTGATATTGAGGAAGCAGCAGAAATGCGAACTTTGC TTATCAATATGAATAGCGATTTGTGCAAGAAATCACCTTACTATGTAACACGCATTGTCGGTGAAGATAAGGAGGGTAAG AAACAATTGGATAACTTTATTAGTGTGGATGAGCCTTATCCAGTGATTGTAACCACCTCCGAACTTCTTTCTACTGGTGT GGACTGTAAAACCTGTGGCTTAATCGTCATAGACAAAGAAATTGGGTCTATGACTGAATTTAAGCAAATTATAGGGCGTG GTACACGACTCAGAAAAGATAAGGGAAAGTGGCATTTGGAAATCCTTGATTTCCGCAATGCTACTGCAAAATTCAAAGAC CCTACATTCGATGGTGATCCTGAACCTCCTAAGGGAGGTGGTAAAAAGCCCAAACCATATAAAATAATTGATGGTCCATC AACCGTAGTTTCCGAGCCTCATGAAAAATATATTATCAATGGAAAGGATATCCGTATTGCCCATGAGATAGTATCTGTGT TAGGCGAAGATGGCAAGACGATGAGAACAGAAAGTATTCAATCATTCGCAAGAACGCAATTATTGCGTCATTACCAAAGT CTGAATGATTTCATACAGACGTGGACAGAAGCTGAACGCAAGCAAGCTATAATGGATGAATTAAAGGAGTATGCCATCCT GATAGACGCTGTCCGTGAAGCAAATCCGGCATTAAAGGATGCCGACATATTCGATGTGATATGTCACGTTGCGTTTGACC AGCCTCCATTAACAAGGAAAGAGAGAGCAAATAATGTGAAGAAGTGTAACTACTTCGGAAAATATGAAGGTAAAGCACGT GAAGTGTTGGAGGCTCTTCTTGAAAAATATGCAGAGAATGGTATTCTCGACTTTGAAAAAGCAAACATCTTGGAGATACC TCCATTCAATAGCATAGGAAAACCAACTAAAATTATAAAACTATTTGGTGGCATTGCCGGTTATGAGCAAGCTATCAGAG AATTAGAGTATCAGATATATAAATTGGCATAA
Upstream 100 bases:
>100_bases CATTGTGAGTAAATGGTGTAGTAATTCAGTTCAACCGGATATTAAGACACTCAACGACATAGGCAATGCCCTTAACTTAA TATTGATGTAAAAGATTTGA
Downstream 100 bases:
>100_bases AAATGGCAGTAAATAACATTATAAAGCGAATCCGGAATATCATGCGTCAGGATGCAGGTATCAATGGTGACGCACAGAGA ATTGAGCAAATGACTTGGAT
Product: putative type I restriction enzyme
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>783_residues MSAVTNHKQLIVMEVNKKKLKEQEIRTLLITPALQQKGWAVSINMREEYYFTDGRVLVVGNQHSVAEGKKADYLLYHNGK PIAVVEAKDNKHTVGSGMQQAMDYALILDLKFAYSSNGDAFLEHDFITGKETEIKLEDFPTEEELYNRYLASKNYTPDEL NIIETPFYYDAHSHEPRYYQRIAVDRTVEAIAKGQQRVLVVMATGTGKTFTAFQIIHRLHKSGAKKKILYLADRNILIDQ TMTQDFKPFKKFMTKITSVGEGEEKIDSSYEMYMALYHQLVGKEGRPDPFLEVRPNFFDLIIVDECHRGSAKDDSAWRKV LEYFNTATQIGMTATPKADEGANNLDYFGEPVYTYSLLQGINDGFLAPYRVTADFINVDLQGWTPEEGEIDLLGKEIEQK LYQRQNIGRDLAIKLRRKVVANRITKMLHDIGRMTKTIVFCSDIEEAAEMRTLLINMNSDLCKKSPYYVTRIVGEDKEGK KQLDNFISVDEPYPVIVTTSELLSTGVDCKTCGLIVIDKEIGSMTEFKQIIGRGTRLRKDKGKWHLEILDFRNATAKFKD PTFDGDPEPPKGGGKKPKPYKIIDGPSTVVSEPHEKYIINGKDIRIAHEIVSVLGEDGKTMRTESIQSFARTQLLRHYQS LNDFIQTWTEAERKQAIMDELKEYAILIDAVREANPALKDADIFDVICHVAFDQPPLTRKERANNVKKCNYFGKYEGKAR EVLEALLEKYAENGILDFEKANILEIPPFNSIGKPTKIIKLFGGIAGYEQAIRELEYQIYKLA
Sequences:
NA
Specific function: NA
COG id: COG4096
COG function: function code V; Type I site-specific restriction-modification system, R (restriction) subunit and related helicases
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA