| Definition | Bacteroides fragilis NCTC 9343 chromosome, complete genome. |
|---|---|
| Accession | NC_003228 |
| Length | 5,205,140 |
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Identifier: 60680770
GI number:
Start: 1504355
End: 1506355
Strand: Direct
Name: Not Available
Synonym: BF1250
Alternate gene names: NA
Gene position: NA
Preceding gene: 60680769
Following gene: 60680773
Centisome position: NA
GC content: NA
Gene sequence:
>2001_bases ATGCAGAATGAAGATGATTTAAGAGGACTTGCAAAGGTTATGGACTTTATGCGGGCAATCAGTATTTTATTTGTAGTGAT AAACATTTACTGGTTTTGTTACCAGTCGTTCCGGGAATGGGGTATCAATATCGGGGTAGTCGATAAAATCCTGCTGAACT TCCAGCGTACCGCCGGGCTGTTCTCCAATATCCTATATACCAAACTTTTTTCAGTGGTATTTCTTGCGCTTTCCTGTTTA GGTACAAAGGGAGTGAAAGAGGAAAAAATCACATGGAACAGGATTTATGTATTCCTGACAATCGGTTTTATCCTGTTTTT CCTGAATTGGTGGCTGTTGTTTCTGCCGCTGCCGGCAAACACGGCATTGTATATCTTTACCATGACCGCCGGGTATCTTT CCCTGTTGGCTGCCGGAGTATGGATTTCACGTTTGCTGAAAAATAACCTGATGGATGATGTGTTTAATACCGAGAATGAA AGTTTTGCACAAGAAACACGCTTGATAGAAAACGAGTATTCCATCAACCTGCCGACACGGTTCTACTACAAAAAGAAATG GAATGACGGATGGATAAACGTTGTAAATCCGTTCAGGGCAAGCATGGTATTGGGTACGCCCGGTTCGGGAAAATCGTATG CGATAGTCAATAATTACATCAAACAGCAAATCGAAAAAGGCTTTGCTGTTTATATTTATGACTACAAATTTCCTGACCTT TCAGAGATAGCTTACAACCACTTAATCAGTTATTTAGATGGATATAAAGTGAAACCTAAATTCTACATGATTAACTTTGA CGACCCACGTAAAAGCCACCGATGCAACCCGATAAATCCGGCGTTTATGACGGACATATCGGACGCATACGAAGCCAGTT ATACAATCATGTTAAATTTAAATCGCAGTTGGATAACCAAGCAGGGAGACTTCTTTGTAGAAAGCCCGATTATCCTGCTG GCTTCTATCATTTGGTTTTTGAAAATCTATCAGGGTGGTAAGTATTGTACATTCCCGCACGCCATTGAATTTTTGAACAA GAAATATGCCGATACATTCACTATTTTAACCAGTTATCCCGAACTGGAAAACTACCTTTCACCGTTTATGGACGCATGGG AATCTAATGCGCAAGACCAGTTGCAGGGGCAGCTTGCAAGTGCTAAAATCCCGCTTTCGAGGATGATTTCACCCGCTTTA TATTGGGTAATGACAGGGGACGATTTTTCACTGGATATAAACAATCCGGAAGAACCTAAAATATTGGTGGTAGGCAATAA TCCCGACCGTCAAAATATCTATTCCTGTGCTTTGGGACTGTATAATTCCCGTATTGTGAAGCTGATAAACAAGAAGCACC AACTCAAAAGTTCCGTAATCATAGATGAATTACCGACCATCTATTTTCGGGGACTGGATAACCTGATAGCAACGGCACGA AGCAACAAGGTAGCGGTCTGTTTGGGCTTTCAGGATTTCAGCCAGTTACGCCGGGACTATGGCGACAAGGAAAGCAAAGT TATCGAAAATACTGTGGGTAATATCTTTTCCGGTCAGGTGGTTTCAGAAACGGCTAAAACGCTTTCAGACCGTTTCGGTA AGGTACTGCAAAAACGGCAAAGCATGACTATCAATCGGAACGACAAATCAACCTCAATCAGTACGCAGATGGATAGCCTG ATACCACCCAGCAAAATATCCAATCTCACACAGGGTATGTTTGTGGGTGCGGTCAGCGACAATTTCGATGAACGGATAGA GCAGAAAATATTCCATGCGGAAATTATGGTGGATAACGAGAAAGTGAAGCGAGAAACAGCCAGTTACAAGAAACTACCCC AAATTATAGATTTCAGGGACGAGGACGGGAATGACCGGATGCAGGAAGAAATACAGGCAAATTACAACCGGGTCAAGCAG GAAGTCCAGCAGATTATCACGGACGAAATAGAAAGGATTAAAAATGATCCAAATTTGCAAAATTTACTGAAACATGAATA A
Upstream 100 bases:
>100_bases GTGGGAACGATACGCCACCCGATAACAGCCAAGTTCCACCATCCAAGAAAAGAAAGAAGAAGAAACAAAGACGTATTTAA TAACTATAAAAATTTCAATT
Downstream 100 bases:
>100_bases TTCTTAGACCGTTTTACTTTCTTCTTGAATGTTTTTTGAGAAATCCAACATTAAGTGATAAATAGTAATTTCTTTATTAT CGATACTATGTATTGAATAA
Product: putative transmembrane mobilisation protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>666_residues MQNEDDLRGLAKVMDFMRAISILFVVINIYWFCYQSFREWGINIGVVDKILLNFQRTAGLFSNILYTKLFSVVFLALSCL GTKGVKEEKITWNRIYVFLTIGFILFFLNWWLLFLPLPANTALYIFTMTAGYLSLLAAGVWISRLLKNNLMDDVFNTENE SFAQETRLIENEYSINLPTRFYYKKKWNDGWINVVNPFRASMVLGTPGSGKSYAIVNNYIKQQIEKGFAVYIYDYKFPDL SEIAYNHLISYLDGYKVKPKFYMINFDDPRKSHRCNPINPAFMTDISDAYEASYTIMLNLNRSWITKQGDFFVESPIILL ASIIWFLKIYQGGKYCTFPHAIEFLNKKYADTFTILTSYPELENYLSPFMDAWESNAQDQLQGQLASAKIPLSRMISPAL YWVMTGDDFSLDINNPEEPKILVVGNNPDRQNIYSCALGLYNSRIVKLINKKHQLKSSVIIDELPTIYFRGLDNLIATAR SNKVAVCLGFQDFSQLRRDYGDKESKVIENTVGNIFSGQVVSETAKTLSDRFGKVLQKRQSMTINRNDKSTSISTQMDSL IPPSKISNLTQGMFVGAVSDNFDERIEQKIFHAEIMVDNEKVKRETASYKKLPQIIDFRDEDGNDRMQEEIQANYNRVKQ EVQQIITDEIERIKNDPNLQNLLKHE
Sequences:
NA
Specific function: NA
COG id: COG3505
COG function: function code U; Type IV secretory pathway, VirD4 components
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA