Definition Bacteroides fragilis NCTC 9343 chromosome, complete genome.
Accession NC_003228
Length 5,205,140

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Identifier: 60680458

GI number:

Start: 1138716

End: 1140716

Strand: Reverse

Name: Not Available

Synonym: BF0909

Alternate gene names: NA

Gene position: NA

Preceding gene: 60680459

Following gene: 60680457

Centisome position: NA

GC content: NA

Gene sequence:

>2001_bases
GTGGAATTTACAATAGACACCGGTAATAAGGAGTTTCAGGATGCACTGAATCTGATTCAGTATACTCGTCAATCAGTTTT
CCTCACGGGGAAAGCGGGAACGGGTAAATCTACTTTCCTGAAATACATCTGTAAGAATACCAAGAAGAAGCACATCGTGC
TGGCACCCACCGGAATCGCTGCCATTAATGCCGGTGGCAGCACTCTGCACAGCTTCTTCAAACTTCCTTTTCATCCGTTA
CTTCCTGATGATCCGAATCTGAGTTTGCAACGGGGACGCATCCATGAATTCTTTAAATACACCAAGCCACACCGTAAATT
GCTGGAACAGGTAGAACTGGTCATTATCGACGAAATATCAATGGTACGCGCCGATATGATTGATGCCGTAGACCGCATTT
TGCGTGTATACAGTCGTAATCTGCGCGACCCCTTCGGAGGAAAACAAGTTTTACTGGTAGGCGATGTATTCCAGCTTGAA
CCGGTAATCAAAGGGGATGAACGGGAAATTATCAACCGCTTCTATCCCACTCCTTATTTTTTCTCGGCACGGGTCTTCAA
CGAGATCGAATTGGTATCTATCGAGTTACAGAAAGTATATCGTCAGTCAGATGCAGTCTTTGTCAGTGTACTCGACCACA
TCCGGAGCGGAGCAGCAGGGGCAGCCGACCTTCAGCTGCTCAACACCCGCTATGGCGCTCAAATTGATGCTTCGGAAGAA
GATTTATACATCACTCTGGCTACGCGCCGCGATACGGTAGAAACCATCAATGAACGGAAACTTACCGAACTCCCCGGCGA
TCCTGTAGTGTTTGAGGGCGAAATCAACGGCGACTTTCCCGAAAGTAGCTTGCCCACCTCAAAAGAACTGACCCTGAAAC
CGGGAGCACAAATCATCTTTATCAAAAATGACTTTGAACGCCGTTGGGTAAACGGTACCATCGGTGTAGTAAGCGGCATC
GACAACGACGGTATCATCTACGTCATCACCGATGATGGCAAAGAGTGTGATGTCCACCGGGAATCATGGCGCAACATCCG
TTACAAGTACAACGAAGAGAAAAAGGAGATTGAGGAAGAAGAACTGGGTACTTTCACACAATATCCCATCCGCCTGGCAT
GGGCCATCACCGTGCACAAAAGCCAGGGTTTGACCTTTAGCCGTGTAGTCATAGACTTTACCGGAGGAGTGTTTGCCGGC
GGACAAGCTTATGTAGCTCTCAGCCGTTGCACATCGCTTGAAGGAATTCAACTGAAAAAGCCTATCAGCCGCGCGGATAT
TTTTGTCCGTCCCGAGATTGTCAGTTTTTCCGGAAGATTCAACAACCGGCAAGCCATCGACAAAGCATTAAAACAAGCAC
AGGCCGATGTGCAGTATGCCGCAGCTGCCCGTGCTTTCGACAAAGGAGATTTCGAGACATGCCTCGAGCAGTTTTTCCTG
GCCATTCATTCCCGTTATGATATAGAAAAGCCTGCCGCCCGAAGATTAATTCGCAGGAAATTGGGAGTCGTCAACCTATT
GCGGGAACAAAAAAGGAAACTACAAGCACAAATGGAGGCACAGAAAAAAAGCCTGCAAAAGTATGCCCGAGAGTATTTGC
TAATGGGAAACGAATGTATCACTCAGGCGCATGACGTTCGGGCCGCCCTTGCCAATTATGACAAAGCGATTGAGCTCTAT
CCCGAATACATCGACGCCTGGATACGAAAAGGAATCACGCTGTTCAACGAAAAAGAGTTCTTCGATGCCGAGAATTGCCT
GAACCGGGCAGTCAGCCTGCGTCCTTCAGAGTTCAAAGCACTCTATAACCGAGGCAAACTTCGCCTGCAGACAGAAAACA
TAGAAGGGGCTTTATCAGACCTCGACAAAGCAACTAGCCTGAAACCTGAACATCCCGGAGCACACGAACTTTTCGGAGAT
GCATTATTAAAAGTCGGTAAAGAGACAGAAGCAGCCATCCAATGGCGTATAGCAGAGGAACTACGAAAAAAGAAGAAATA
A

Upstream 100 bases:

>100_bases
AATGCGAATGACGATGTCAAAGAAACCGCCGACTACATAACCACTTCTGTAGACGAAGACGGAATACAAAAAGCATTAAA
ACATTTCGGGATCATCTGAC

Downstream 100 bases:

>100_bases
GGTAAGTTTATTTCTGTAATCTATTTCACCACAGGATTACACAGATCTTCACAGATTAATAATTTATTTCATTGTCAATA
TATAAAGTATCTGTGTTAAT

Product: putative helicase protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>666_residues
MEFTIDTGNKEFQDALNLIQYTRQSVFLTGKAGTGKSTFLKYICKNTKKKHIVLAPTGIAAINAGGSTLHSFFKLPFHPL
LPDDPNLSLQRGRIHEFFKYTKPHRKLLEQVELVIIDEISMVRADMIDAVDRILRVYSRNLRDPFGGKQVLLVGDVFQLE
PVIKGDEREIINRFYPTPYFFSARVFNEIELVSIELQKVYRQSDAVFVSVLDHIRSGAAGAADLQLLNTRYGAQIDASEE
DLYITLATRRDTVETINERKLTELPGDPVVFEGEINGDFPESSLPTSKELTLKPGAQIIFIKNDFERRWVNGTIGVVSGI
DNDGIIYVITDDGKECDVHRESWRNIRYKYNEEKKEIEEEELGTFTQYPIRLAWAITVHKSQGLTFSRVVIDFTGGVFAG
GQAYVALSRCTSLEGIQLKKPISRADIFVRPEIVSFSGRFNNRQAIDKALKQAQADVQYAAAARAFDKGDFETCLEQFFL
AIHSRYDIEKPAARRLIRRKLGVVNLLREQKRKLQAQMEAQKKSLQKYAREYLLMGNECITQAHDVRAALANYDKAIELY
PEYIDAWIRKGITLFNEKEFFDAENCLNRAVSLRPSEFKALYNRGKLRLQTENIEGALSDLDKATSLKPEHPGAHELFGD
ALLKVGKETEAAIQWRIAEELRKKKK

Sequences:
NA

Specific function: NA

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA