Definition Bacteroides fragilis NCTC 9343 chromosome, complete genome.
Accession NC_003228
Length 5,205,140

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Identifier: 60680419

GI number:

Start: 1081423

End: 1084734

Strand: Reverse

Name: Not Available

Synonym: BF0868

Alternate gene names: NA

Gene position: NA

Preceding gene: 60680425

Following gene: 60680418

Centisome position: NA

GC content: NA

Gene sequence:

>3312_bases
ATGAAAAAATGCAATCAAAAGTGGTTTAATCCTCAAAAAGTAAAAAAGCAAATAGCAATTGCTGTTGCTATTAGTTTAGT
TTGTGCAATACCTATCAGCACATTTGCACAAGTACTCAAGTTTTCAATAAAAAAGAGTAACACTTCTATCCAATCAGTAT
TACAAGAGTTAGAAAAAGAAAGTGGATATACTTTTTTTTATAATGACAATCAAGTGAAGCTAGATAAAAAAATCTCTATA
AATATAGAAGATGCTTCGATAGAAGTTGTTCTAAATCAAATATTTGAAAATTCAGGATATTCCTATCGAATAGTAGAGAA
TCAAATTGTTATATATACAACGCCCACCACAACTGTGCAACAAACGGTTCAACAGAAAAAACAACAAAAAGTGACCGGTG
TAGTAAAAGATATTGCAGGAGATCCTATAATAGGAGCATCTATAATAGAAAAAGGATCTTCTTCAAACGGGACTATCACT
AACGTGAATGGCGACTTTTCTCTTATAGTAACAGGTAATGAACTCCAGGTTAGTTACATTGGATATATTCCTCAAACCAT
TAATCTCAAACCGGGGGTAAGCTCTTATAATGTAATAATGAAGGAAGATACCAAAACATTAGATGAAGTAGTGGTAGTTG
GGTATAGTACACAAAAAAAAGAGAGCTTGACTGGTGCGCTACAAACAGTTAAGAGTGATAAACTAAAAGATATTACCACC
CCTTCAGTAGAAAACATGTTAAACGGAAAGGTTCCGGGAGTATATGTAGCTCCAGGGTCGGGACAACCCGGGTCAGGAGG
AGCTGTCGTGATTCGTGGGCAAGCAACTTTAAGTGGGACCACTGCTCCATTATGGGTTATTGATGGAGTGATTGTTGGTT
CAAATGCCGGTGCTTTGAATCCAAGTGATATAGAAACAATGACTATCCTAAAAGATGCTGCTTCTACTGCTATCTATGGT
TCACAAGGAGCTAACGGCGTTATTCTTGTAACAACCAAAAATGGTAAAGCAGAAAAGATGACAGTAAATGTCTCTGCAAA
AGTTGGTATCAGTAAGTTAGGGAGAGGAAATATGGAAATGATGGATGGAGCGGAGCTATATGATTACTATAAATCATTTT
CAAATCAGGAGGCGATTACTTTTTCACGTTACAATGATAAACTGCGAAATTGTAATTTCGATTGGTTTGATTTGGCTGCC
CAAACAGGAGTTACCCAAGATTACAATGTTTCTTTATCTGGAGGCAATGAGAAAATCAGATCTTTCCTTTCCATCGGTGT
CTATGATGAAGAAGGAGCAGTGAAAGGTTACGATTACACACGATATAACTTCCGATTAAAAACAACCTATAAACCCTTTG
AATGGCTAAGTATAAAACCTGCACTGGCAGGATCGCGACGGGATATTGAAGATAAACAGTATGATGTAACTTCCATGTTC
CAAAGATTGCCATGGGATAGTCCTTTTGATGAAGAAGGGAATTTGGTTCCCAATAGATATACGGGATGGGTGAACAGTTC
TAATAGTAATTATCTATACGATCTGCAGTGGAATAAATCGAACTCTACCAATTATGAGTTTATGGGTAATTTAGATTTTG
ATATTAGAATTACTGACTGGCTGAGTTTTTCATCCGTCAATAACTATAAATATATAGGTTATAATTACAGTGAATATACA
GATCCACGCTCAAGTAGTGGAGAGGGGGTAGATGGGCGTATGCGTGAATATCAAACTACCACTGTACGTCGTTATTCTAA
TCATATCATACGTTTTAACAAGATGTTTGGTAAACATTCAATAAATGCGTTGGCTGCTTATGAATTCAACGATTATTGGG
CCAAAGCAACAGATATGTATGGAATAGGATTTATTCCCGGTTTCGAAGTATTGGACGTGGTAGCTAAACCGGAGAAAGTT
GGTGGTAGTATTAGTGAGTGGGCAGTACAGTCTCTTTTATTTAATGCAAACTATGCTTTTGATAATAAATATCTGGCACA
ACTATCTTTCCGTCGCGATGGAGCCTCTAATTTCGGAGATAATGCAAAATATGGAAATTTCTTTTCTATTAGTGCCGGAT
GGAACATTAATCGTGAAAAATGGTTTCATGCCTCTTGGGTTGATATATTGAAATTACGTATATCTTATGGTTCAGTAGGT
AACAGACCAAGTTCACTTTATCCCCAATACGATCTCTATTCAGTATCTTCTAAATATAACGAAGAATCCGGAGCCTTGAT
ATCACAATTGGGCAATAAAGATCTTACTTGGGAAAAGACTTATACTACAGGCACCGGAATTGACGTAGCTTTTTTTGATA
ATCGGTTGAGAGCAAGTTTTGACTGGTATAATAAGTACACAAGTAACATTCTATATGCAGTACCCATTTCCGGATTAGTA
GGAGTGACAAGTATGTGGAAGAATATTGGTGAAATGCAAAATCAAGGATTTGAATTGTCCATTGGCGGTGATATTATCCG
TACGAAAGACTGGGATTGGAATATAGAAATTAACTTGGGACATAATAAGAACAAATTAAAGAAACTCTATAAGACAAAGA
ACGCTGAGGGACAATTTGTAGAAAAGCCAATTATTATTTCAGATGGAACATCGATTGCAGGTACAGCCAAAAGAGTATTA
CAGCCAGGTTATCCATGTGATACTTATTATCTGAAAGAATGGGCAGGTGTAAACCCGGAAAATGGGGCACCTCAGTGGTA
TAAAACCGTAGAAAATGAAGATGGAACTTTATCACGTCAGAAAACAAGTAATTATTCTGAGGCTGATCAAGTGAAATGTG
GAAGTTCATCTCCAGACATCTTTGGAGGATTTAGTACTGTACTCCGCTGGAAAGATATTGATCTGAATGCAGTATTTGGC
TACTCTGTAGGAGGGCAAATCTATAATTATTCTCGCCAGGAATATGATTCAGACGGAGCATATAACGATCGAAATCAAAT
GAAACTTCAAAAGGGATGGAATCGTTGGGAAAAACCGGGAGATATAGCTACACATCCGGTGGCATCTTATAGTAATACGA
GTAAGTCGAACAGTTCTTCCTCGCGCTATCTTGAAAAGAATGACTATCTTAAATTGAGATCATTATCAATCGGTTATAAC
TTAAAATTACCTCAATATTATATTAATAATATGAGAATTTTCTTCACTGGAGAGAACCTGTTCTGTGTTACAAATTACTC
AGGCGTAGATCCGGAAATTCCGGCTAGTGATGGTTCTGTAATAGGTACTGCATTACCTTCGGTTTATCCAACTGTACGTA
AATTTATGTTTGGGCTTAATTTAACATTTTAA

Upstream 100 bases:

>100_bases
TGGAAAAAACAGTGAAACATGTTAATCAAGCACGGGATTCTTAAAGGATGACGTCTATTATTTGTTAAATTTAAATTATA
ATCTAATAATTATGGTATTT

Downstream 100 bases:

>100_bases
AAGTAACGATTATATGAAAAAGATAATAACTCTACTATGTGCGGTTGCTACTTTAACTGCTTGTGACATAGACAGACTTC
CTTATGGTTCAATGTCAGCC

Product: putative TonB-linked outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1103_residues
MKKCNQKWFNPQKVKKQIAIAVAISLVCAIPISTFAQVLKFSIKKSNTSIQSVLQELEKESGYTFFYNDNQVKLDKKISI
NIEDASIEVVLNQIFENSGYSYRIVENQIVIYTTPTTTVQQTVQQKKQQKVTGVVKDIAGDPIIGASIIEKGSSSNGTIT
NVNGDFSLIVTGNELQVSYIGYIPQTINLKPGVSSYNVIMKEDTKTLDEVVVVGYSTQKKESLTGALQTVKSDKLKDITT
PSVENMLNGKVPGVYVAPGSGQPGSGGAVVIRGQATLSGTTAPLWVIDGVIVGSNAGALNPSDIETMTILKDAASTAIYG
SQGANGVILVTTKNGKAEKMTVNVSAKVGISKLGRGNMEMMDGAELYDYYKSFSNQEAITFSRYNDKLRNCNFDWFDLAA
QTGVTQDYNVSLSGGNEKIRSFLSIGVYDEEGAVKGYDYTRYNFRLKTTYKPFEWLSIKPALAGSRRDIEDKQYDVTSMF
QRLPWDSPFDEEGNLVPNRYTGWVNSSNSNYLYDLQWNKSNSTNYEFMGNLDFDIRITDWLSFSSVNNYKYIGYNYSEYT
DPRSSSGEGVDGRMREYQTTTVRRYSNHIIRFNKMFGKHSINALAAYEFNDYWAKATDMYGIGFIPGFEVLDVVAKPEKV
GGSISEWAVQSLLFNANYAFDNKYLAQLSFRRDGASNFGDNAKYGNFFSISAGWNINREKWFHASWVDILKLRISYGSVG
NRPSSLYPQYDLYSVSSKYNEESGALISQLGNKDLTWEKTYTTGTGIDVAFFDNRLRASFDWYNKYTSNILYAVPISGLV
GVTSMWKNIGEMQNQGFELSIGGDIIRTKDWDWNIEINLGHNKNKLKKLYKTKNAEGQFVEKPIIISDGTSIAGTAKRVL
QPGYPCDTYYLKEWAGVNPENGAPQWYKTVENEDGTLSRQKTSNYSEADQVKCGSSSPDIFGGFSTVLRWKDIDLNAVFG
YSVGGQIYNYSRQEYDSDGAYNDRNQMKLQKGWNRWEKPGDIATHPVASYSNTSKSNSSSSRYLEKNDYLKLRSLSIGYN
LKLPQYYINNMRIFFTGENLFCVTNYSGVDPEIPASDGSVIGTALPSVYPTVRKFMFGLNLTF

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA