| Definition | Bacteroides fragilis NCTC 9343 chromosome, complete genome. |
|---|---|
| Accession | NC_003228 |
| Length | 5,205,140 |
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Identifier: 60680359
GI number:
Start: 989556
End: 992741
Strand: Reverse
Name: Not Available
Synonym: BF0807
Alternate gene names: NA
Gene position: NA
Preceding gene: 60680361
Following gene: 60680358
Centisome position: NA
GC content: NA
Gene sequence:
>3186_bases ATGAAAAAAATTTCAATCTTATTCATGTTGTTGCTTGGCATTACTACATTATATGCACAGCAATTGAACATTACGGGTAC TGTGATTGACAAAAAGCTCAACGAGCCAATCATCGGTGCCACAGTCCAAGTAAAAGGGACGAACAATGGATCCATCACGG ACATGGAAGGTAAGTTTTCATTGAAAAACGTTAGCAAAGGAGGTATACTGACTGTTTCCTACATAGGTTACACCACTCAG TCAATTCCTCTCAATGGTACACAAACATCCTTCAGGATTGAGTTAAGTGAAGATTCAAAAACTCTTGATGAAGTAGTGGT AGTAGGCTTCGGTACTCAGAAAAAAGTAAATCTGACCGGAGCGGTTACAAGTGTAGATACCAAAGCACTAGCATCACGTC CGGTATCACAAGTCGGTCAAGCCCTGCAAGGTGTAGTTCCAGGCTTAAATCTATCGACTCCTGATTTAGGGGGACAGTTG GGACAAACAATGAACGTAAACATCCGCGGAACAGGAACCATTGGTAAAGGATCAAGTGCCTCACCACTTATACTGATTGA TGGAATGGAAGGCAATATGAATAATCTGAATCCAGAAGATATTGAAAATATCTCTGTCTTGAAAGATGCTGCTTCTTCTT CCATCTATGGTTCACGTGCTGCATTCGGTGTTATCTTAATCACTACAAAGAAAGGAAAAGCGGGCAAAATGCAAGTGAAC TATAACAATAGTTTCCGCTATTCCGGACCAACCAACCTTCCTAATCAACTTGATTCCTATCGTTTTGCCAATTATTTCAA TGATGCAGCCATTAATCAAGGAGGAAGTGTGATCTTTGATGAAGAGACCATTGACCGTATCCAAAAGTATATGGCAGGCG AGATTACAACCACCACCATAGCTAACGGTACCAACTGGCATTTCCACGAAAAAGCAAATGATAACGTAAACTGGTGGAAA AAACATTTTCAATGGGCCTGGTCAAACGAACATAATATCAGTTTAAATGGAGGAACAGAGAAGTTACAATACTATGTTTC AGGGAGCTACTTAAACCAAGATGGTAATCTTCGTTATGGAAATGATAATTATAAACGTTACAACGCAACAGCAAAAGTCA ATACCCAAATCAACAAATATGTAGATTTCAACATTAATACCAAATTTGTTCGTTTTGATCTTGACAATCCAGTATATCTT GAGGAAGGTGGACTTCTTTATCATGACATTGCACGTATGTGGCCTATGATGCCTTTTAAAGATCCGAACGGTTATTATAT GAGAAATGGAAAACTCAATCAATTGACTGACGGTGGACGTGCCAAAACACATAATGACAATATTTATCTTCAGGGACAAT TAGTTATTCATCCGCTAAAAGGATGGAATATCTATGCAGAAGCAGGTATGAGAGTCATCAACCAAAATAAGCAAACCAAC CTTAATCCAATCTATGAGCACGACGTAAACGGTAATCCATTAGCATTGGCTTTCAGCGGAAGTTACTCACCAGGATCTTC ATTTGCACGTTCAGCATACCACAATAGTAACTTTTATACGACAAGTGTGTACACCGATTACACATTACAAATAAAAGATC ATTATTTCAAAGCTTTAGTCGGAATGAATACCGAAGAATATGTATATCGCGAACTTGCCGCACAACGTCCTGACGTGATT AGTAGTCTCATTCCAGAAATTAGTGCAGCAACGGGAGAAGATAAAATCAATAGTTCAAAATACAATGATTGGTCTACAGC CGGGTTCTTCGGACGTCTCAACTACAGTTACAAAGACCGCTACATGGCTGAAGTAAATGTTCGTTACGACGGATCATCCC GCTTTTTAAAAGATCAACGTTGGAATGTATTTCCTTCTTTCTCTTTGGGATGGAACTTAGCACGTGAATCATTCTTTGAA CCAATTAACAACATTATTAATACACTAAAACCCCGCGTATCATGGGGTATGCTCGGTAACCAGAACACAGACTCTTACTA TCCGTTCTATTTAACACAAAGTGTAACAGCCAATGGTGGCAATTGGCTAATGGACGGCAGTAGACCAACAACAGCCGGAG TTCCTGGAATGGTCAGCAGTACACTCACATGGGAAAAAATCTATAATACCAATTTAGGCATCGACCTTGGTATGTTCAAC AATCGTCTGAACATGACTTTTGAATACTTCATACGTAGAACGAAAGACATGGTAGGCCCTGCAGCCGAAGTCGGTGCAAT ATTAGGAACTGCTCTGCCAAATACCAATAATGCTGAGTTGAAAAATAAAGGATGGGAACTACAGGCCAATTGGAGAGATA ATATTGGAAAAGTTAACTATAATATAGGATTTAACCTTTCTGACAACCGCGCCAAAGTAATTTCATATCCAAACGCTTCT AAAGCCCTATGGGATTCTAATGGAAATACTCTTTATTACAACGGAATGACTATCGGGGAAATTTGGGGGTATGAAACTGA AGGTATTGCCAAAACAGACGCACAGATGACCGAATGGCTGGCTAGCAATGATCAGAGTAAAATAGGTTCAGTTTGGGGTG CAGGTGATATCATGTATCGAGACCTTAATGGTGATGGTATAGTAGACAAAGGAAACAGTACTGCCACAGACCATGGTGAT TTAAAGAAAATCGGAAATAGCACTCCACGCCTTCGTTTCGGTTTAAGCTTAGGAGCTGACTGGAAGGGTTTCGATATTCA AATGTTTTTCCAAGGAGTCATGAAACGTGATTTATGGTTGAGCGGACCAATGTTCTGGGGAGCAGATGGAGGAGAATGGC AATCAGTAGGTTTTGACGAACATCTTGATTATTTCCGTCCTGAAAATACAACTTCTATATTCGGAGCAAATTTGAACTCC TACTATCCCAAAGCCTACTTAGGAGACAAAGGAAACAAAAACAAGCAAACTCAAACGCGTTATCTGCAAAATGGTGCTTA CATGCGTATGAAAAATCTGCAAATAGGATATACATTCCCCAAAGCTTGGATGAATAAAGCAAAAATTGAAAAGCTCCGCA TTTATGTCAGTGGAGAGAATTTATTCACAATCAGTGGTATTGCCGATATGTTCGATCCAGAAGCAACAGCCGGTAACGGA TTTAGCAACGGAAAGACTTATCCGCTGTCAAAGACTATTTCATTTGGATTAAATATTACTCTTTAA
Upstream 100 bases:
>100_bases GTGTATGCTGAATGATATAGACATGCCCCTACGTAATCTCTCAATCCCTGTACATTTGCCATGTAATTAAACCTTATGTA TAACTTTAAATAAGAAACGA
Downstream 100 bases:
>100_bases AAAGCAAGAACAATGAAAAAGAATCTATTATATATTTTTAGTTTAGCAAGTGTTTTATGCTCTTGCAATGACTTTCTCGA CAAAGAGCCACTAGATGCCG
Product: putative outer membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1061_residues MKKISILFMLLLGITTLYAQQLNITGTVIDKKLNEPIIGATVQVKGTNNGSITDMEGKFSLKNVSKGGILTVSYIGYTTQ SIPLNGTQTSFRIELSEDSKTLDEVVVVGFGTQKKVNLTGAVTSVDTKALASRPVSQVGQALQGVVPGLNLSTPDLGGQL GQTMNVNIRGTGTIGKGSSASPLILIDGMEGNMNNLNPEDIENISVLKDAASSSIYGSRAAFGVILITTKKGKAGKMQVN YNNSFRYSGPTNLPNQLDSYRFANYFNDAAINQGGSVIFDEETIDRIQKYMAGEITTTTIANGTNWHFHEKANDNVNWWK KHFQWAWSNEHNISLNGGTEKLQYYVSGSYLNQDGNLRYGNDNYKRYNATAKVNTQINKYVDFNINTKFVRFDLDNPVYL EEGGLLYHDIARMWPMMPFKDPNGYYMRNGKLNQLTDGGRAKTHNDNIYLQGQLVIHPLKGWNIYAEAGMRVINQNKQTN LNPIYEHDVNGNPLALAFSGSYSPGSSFARSAYHNSNFYTTSVYTDYTLQIKDHYFKALVGMNTEEYVYRELAAQRPDVI SSLIPEISAATGEDKINSSKYNDWSTAGFFGRLNYSYKDRYMAEVNVRYDGSSRFLKDQRWNVFPSFSLGWNLARESFFE PINNIINTLKPRVSWGMLGNQNTDSYYPFYLTQSVTANGGNWLMDGSRPTTAGVPGMVSSTLTWEKIYNTNLGIDLGMFN NRLNMTFEYFIRRTKDMVGPAAEVGAILGTALPNTNNAELKNKGWELQANWRDNIGKVNYNIGFNLSDNRAKVISYPNAS KALWDSNGNTLYYNGMTIGEIWGYETEGIAKTDAQMTEWLASNDQSKIGSVWGAGDIMYRDLNGDGIVDKGNSTATDHGD LKKIGNSTPRLRFGLSLGADWKGFDIQMFFQGVMKRDLWLSGPMFWGADGGEWQSVGFDEHLDYFRPENTTSIFGANLNS YYPKAYLGDKGNKNKQTQTRYLQNGAYMRMKNLQIGYTFPKAWMNKAKIEKLRIYVSGENLFTISGIADMFDPEATAGNG FSNGKTYPLSKTISFGLNITL
Sequences:
NA
Specific function: NA
COG id: COG4771
COG function: function code P; Outer membrane receptor for ferrienterochelin and colicins
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA