| Definition | Bacteroides fragilis NCTC 9343 chromosome, complete genome. |
|---|---|
| Accession | NC_003228 |
| Length | 5,205,140 |
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Identifier: 60680270
GI number:
Start: 871402
End: 874152
Strand: Reverse
Name: Not Available
Synonym: BF0711
Alternate gene names: NA
Gene position: NA
Preceding gene: 60680271
Following gene: 60680269
Centisome position: NA
GC content: NA
Gene sequence:
>2751_bases ATGAAAAAAAGTACATACTTATGGATGTTGCCCCTACTATTTGCATGGCCGCAACAAATGACGGCTCAACACCCCCTCTC ACTTCCTGCCGACAGTATAACTATTGACTCCTTATTGGAGACTGTAGAAAAAAATACACCCTATAGGTTTTTCAGCACTA TTAGTGCTCCTTTCAAGGTTTTGGTGAAAGGAAAAGCTTCACCCCTGCAACAATTAAAAGAAGCACTTGAGCCGACTCCC TATAAATTGTCAGTATCCGGAAACAATTTATTCGTGCTGAAAGAGCAGGAACTCATCACGCTATTACCTGCTAAACTGAC CGGAGAACCGGAAAAAGGCGAAAGTTATTATGGTGACGTATATACTTACCTAAGCGGAGAACCTGAAAAGGCATCTTCAG AAAACAAAGTGTATAATGTGGGAGATGTACGAATCAAGCAACCACCACGAAAAGCGGTACTCAAAGGGCAAGTTACTAAC TTTAAAACCGGTGAGCCCATGATAGGCATCAATCTGATTTTAAAGGACCCATGGATTGCGACGACAACAGATGTTAAGGG AAACTTTACTCTTGAACTTCCTACCGGACACAAACAAATTGATATCAAAGGACTTAACATTAAAGATACCCGTCGACAAA TTATGCTTTACAGTGATGGTACACTGGACATCGAACTTGAAGAAACTACACATATGCTGGACGAAGTAACCATTACTTCC GGACGTATACAAAATGTGAAAAGTACGCAATTAGGTGCAGAAACACTGCGTCCAACCCAATTGAAGAATATCCCGATGGC CTTGGGAGAAGTAGACATTTTAAAGATGGTACAGGCTTTACCCGGTGTAAAAACAGTAGGTGAAGCTTCAAGCGGCTTCA ACGTACGTGGTGGAGCTACCGACCAGAATCTAATTCTGCTAAATGACGGAACCATCTATAACCCGAACCATTTATTCGGC TTTTTTGCAGCCTTCAATTCAGATATGGTAAAAGAAGCCGAGATATATAAAAGCAGCATCCCGGCACAATATGGTGGACG TATTTCATCCATTCTAGATATCACCGGTAAAGAAGCCAATAAAGAAAAATTCACCGGTTCGGCCGGTATCGGTCTGGTAA CGAGTAAACTGAATCTGGAGATTCCGATTATCAAAGACAGAACGTCTGTATTACTAAGTGGGCGTACTACGTATTCTGAC TGGATCATGAAGCAGCTTCCGGAGAAAAGCGGATACAAAAACGGTACCGCCGGCTTTTATGATTTGGCTGCTATTGTGGC ACATAAATTCAATGACAAACATAGTCTTAATGTCTACGGATACTATAGTCATGACCGTTTCGCTTTCAATTCAAACGAAA AATACGGCTACAATAATCTCAATGCTTCCGCACGATGGAGAGCTGTATTTAACGAAAAACTGATAGGATACTTCTCCGCC GGATACGATCATTACGATTACAATAACCGCGAGACCGTCAATGCATCAGCTGCTTATAAACTTTCATTTGATATTAATCA GTATTTTGTCAAAGCAGACTTCACAAACATACTGGCCGATAAGCACACGCTCAACTTTGGTTTCAAGTCCATGCTCTATC ATATCAATTCGGGCACTTATGAACCTGAAGGAAGTGAATCATTTGTAAAAAAGGACGTTTTACAAAAGGATAAAGCCTTG GAAACGGCATTTTATTTAGGTGATGAATGGGAAATCACTCCCAAACTATCGGTCAACGCAGGTATCCGTTACTCACTGTT CAGTGCACTCGGTCCACGTTCGTACTATCAATATGCATCAGGCATGCTCCCACACGAATCGACCATAACGGACACCATCA CTGCAGGAGCAGGAAAATTCATGAAGACTTATCATGGGCCGGAATTCCGGTTATCCGCCCGGTATGCCTTCACAGATAAT TTCTCGGTCAAAGCCGGATTTAACTCGATGCGGCAATATATCCATAAGTTGTCGAACACTGTCATTATGTCGCCAACGGA TACATGGAAGTTGAGCGATGTGAACATCAAACCCCAAAGAGGCTGGCAAGCCGCAGCCGGACTTTATCTAAATTCTCCGA GTGGCATCTGGGAATATTCTGTGGAAGGATATTACAAACGAATGTCCGATTACCTGGATTATCGTGGAGGAGCAAAGCTA CTTATGAACCACCATATTGAAACTGACGTCATCAACACGCAGGGACATGCTTATGGCGTAGAATTGCAGGTAAAAAAACA AGTCGGTAAGCTCAACGGATGGATGAGTTACACGTATTCACGTACCTTCTTGAGACAGAATGATAAACGAATTGAGAAAC CGGTGAATAACGGTGACTGGTATCCTACAGAATACGATAAGCCTCACGACTTTAAGTTTGTAGGTAATTACAAATTTACG CATCGATACAGTATGTCAATCAACGTGGATTATAGCACAGGACGCCCCACTACCATACCTGCCGGACAGTATTATGATGA ATCAACGCAATCGATGCGAGTTTACTATACGGAAAGAAACTCATACCGCATACCGGATTACTTTCGTACAGACATCTCTT TTAATATAGAACCCAGCCATCATCTGACCCTGTTGACACATAGTTCTATTTCGATTGGGGTATACAATGTCACCGGAAGA AAGAATGTGTATTCTATTTATTATATGCCGGAAGAAGGACAAATAAAAGGATACCAGATGTCTATTTTCGGAGTTCCGAT TCCTTTCATTACGTATAACATAAAATTCTAA
Upstream 100 bases:
>100_bases ACGCACGAAAACATAAACTTAATTTTCGCCATGACGCTGATGCCTCATTAATCGCTCTTACTAACTTTTGTGAAGAATTG ATAGACCAAAAACAAACACG
Downstream 100 bases:
>100_bases CATCATGCTGAAATCAAAATATAAAATCTATCTGTTACTACTCTGCCTGACAGGTTGTGTTTCAGAATACAACGCACAAC TACCTTCTTCCGATGAAGAA
Product: putative TonB-dependent outer membrane receptor protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>916_residues MKKSTYLWMLPLLFAWPQQMTAQHPLSLPADSITIDSLLETVEKNTPYRFFSTISAPFKVLVKGKASPLQQLKEALEPTP YKLSVSGNNLFVLKEQELITLLPAKLTGEPEKGESYYGDVYTYLSGEPEKASSENKVYNVGDVRIKQPPRKAVLKGQVTN FKTGEPMIGINLILKDPWIATTTDVKGNFTLELPTGHKQIDIKGLNIKDTRRQIMLYSDGTLDIELEETTHMLDEVTITS GRIQNVKSTQLGAETLRPTQLKNIPMALGEVDILKMVQALPGVKTVGEASSGFNVRGGATDQNLILLNDGTIYNPNHLFG FFAAFNSDMVKEAEIYKSSIPAQYGGRISSILDITGKEANKEKFTGSAGIGLVTSKLNLEIPIIKDRTSVLLSGRTTYSD WIMKQLPEKSGYKNGTAGFYDLAAIVAHKFNDKHSLNVYGYYSHDRFAFNSNEKYGYNNLNASARWRAVFNEKLIGYFSA GYDHYDYNNRETVNASAAYKLSFDINQYFVKADFTNILADKHTLNFGFKSMLYHINSGTYEPEGSESFVKKDVLQKDKAL ETAFYLGDEWEITPKLSVNAGIRYSLFSALGPRSYYQYASGMLPHESTITDTITAGAGKFMKTYHGPEFRLSARYAFTDN FSVKAGFNSMRQYIHKLSNTVIMSPTDTWKLSDVNIKPQRGWQAAAGLYLNSPSGIWEYSVEGYYKRMSDYLDYRGGAKL LMNHHIETDVINTQGHAYGVELQVKKQVGKLNGWMSYTYSRTFLRQNDKRIEKPVNNGDWYPTEYDKPHDFKFVGNYKFT HRYSMSINVDYSTGRPTTIPAGQYYDESTQSMRVYYTERNSYRIPDYFRTDISFNIEPSHHLTLLTHSSISIGVYNVTGR KNVYSIYYMPEEGQIKGYQMSIFGVPIPFITYNIKF
Sequences:
NA
Specific function: NA
COG id: NA
COG function: NA
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA