Definition Bacteroides fragilis NCTC 9343 chromosome, complete genome.
Accession NC_003228
Length 5,205,140

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Identifier: 60680133

GI number:

Start: 672022

End: 674241

Strand: Reverse

Name: Not Available

Synonym: BF0565

Alternate gene names: NA

Gene position: NA

Preceding gene: 60680135

Following gene: 60680132

Centisome position: NA

GC content: NA

Gene sequence:

>2220_bases
ATGAAAAAGATGATTTTTGCCGGCTGTCTGATGGCCGGAGCAAGTGTCTTCGCGCAAGCGGGCGAGACAGACAGCTTGAA
AGTAGTAAATCTGCAAGAGGTGCAGATAGTATCCACACGTGCCACTTCAAAAACCCCGGTGGCATTCACCAACGTTTCGA
AAGAAGAACTCAAAAAGCAGAACTTCGGGCAAGACATCCCTTTTCTGCTCAGTATGACTCCTTCGGCACTGACCACCAGT
GATGCCGGAGCAGGTATCGGTTACACCACACTGCGCGTACGGGGAACAGACGGGACACGCATCAACATCACAGCCAACGG
AATCCCGATGAATGATGCCGAAAGCCATACACTCTTCTGGGTAAATATGCCCGACTTTGCTTCGTCCGTAAAGGATATAC
AAGTGCAGCGCGGTGCGGGTACATCGACCAACGGCGCAGGCGCTTTCGGAGCCAGTGTCAATATGCAGACGGAAGGTATT
TCAATGCAACCTTATGCCGAAATAAACGCCTCGTACGGTAGCTTCAACGCTCACAAAGAGACAGTAAAATTCGGGACGGG
ACTGCTGAAGGATCATTGGGCATTCGATGCCCGCCTGTCCAACATCGGTACGGACGGATACATAGACCGGGCATCAGTAG
ACCTGTACTCTTTCTACGCACAGGGTGGATATTTTGCCGACAATACTTCGGTGAAGTTCATCACCTTCGGCGGTAAAGAA
AAGACGTATCATGCCTGGAATTATGCAACTAAGGAAGAGATGAAGAAATATGGCCGACGCTTCAACTCATGCGGCATGTA
CACAGATGACGACGGACACATCCGCTTTTACAAAGACCAGACGGACAACTACCTGCAAATGAACTATCAGCTCTTGCTGA
ATCATACTTTCTCGGCAGCATGGAACCTGAATGCGGCACTCCATTATACAAAGGGGGACGGCTACTATCAGGAGTATAAA
GAGGATCGCAGCCTGAAAGAGTATCGCCTGCATCCGTTTATGTACGATGGAAAGGAAGTGGAAAAAAGCGACCTGATCCG
GCAGAAGAAGATGGACAATCACTTTGGCGGCGGCGTATTCTCGGTGAACTACCGGAATGAGAAGCTGGACGCTTCGCTGG
GCGGCGCACTGAACTACTACGACGGATGGCACTTCGGACGGGTGATCTGGGTGAAGAACTATATCGGCGAGTTGCTGCCC
GACCACGAATATTACCGTAACAAAGCCAAGAAGACGGACGGGAACCTCTATCTGAAAGCCAACTACAATCTGGTGGCAGG
CCTCAACGCGTATGCCGACCTGCAATACCGCTACATCAACTATAAGATACACGGTGACAATGACAAGTACGATTACAACA
CTGACGGACTACAAAAGCTCGCAGTCAACGATCACTTCAACTTTTTCAACCCGAAAGCCGGACTGAACTGGGATATCGAC
TCCAACAACCGGGTTTACGCCTCTTTCTCCGTTGCCCAGAAAGAACCTACACGAAACAACTATACCGACGGTAACGCAGA
CGAATATCCGAAGGCGGAAAAACTGTACGACTACGAACTGGGGTATACCTACCGCAACACATGGTTGAGCGCCGGAGTCA
ACTTCTACTATATGGATTACAAGGACCAGTTGGTGCTGACCGGAGAATTGAACGAAATAGGCGAAGCCATGGCACGCAAT
GTGCCGGACAGTTACCGGACGGGCGTAGAACTGATGCTAGGAGTTAAGCCATGCCGATGGTTCCAATGGGACATCAACGG
TACGCTGAGCAAGAACCGGGTGAAAAACTTCACCGAAAAACTGTACGAAGACGAGTGGAAGAACCCGATCGAAGTGGAAC
ATGGTAACACCCCGATCGCTTTCTCTCCGGACTTTATACTGAATAATCGTTTCTCGTTCAGCCACAAAGGATTCGAAGCC
GCCCTCCAGTCACAGTACGTCAGCAAGCAGTATATGAGCAATGCCAAGCAAGCAGAGCAGACACTCGATGCTTATTTTGT
GAGCAACCTCAATCTGGCATATACATTCCAATTGCGACACGTGAAGTCGGTTACAGTGGGATTCACCATCTACAACCTCT
TCAACGAAAAGTATGAAAACAACGGGTATGCCGGAAGCGGCTATACGCTGAAGGACGGCAAGCCCGAACGCTATAATTAT
GCCGGCTATGCCGCCCAGGCAGGTACAAATGTAATGGGTAACATCTCGATCCGCTTCTAA

Upstream 100 bases:

>100_bases
GCCGATTCACTTAGTAGGGGTGCCTTAACATGACGGGCTGAGAACATACCCTTTGACCTGATCCGGGTAATGCCGGCGTA
GAGAAAAACAAATTAGCAAC

Downstream 100 bases:

>100_bases
GCCATGAACTATCTCGAAATCACAGGTGCCCTTGTCGGGCTGATTTACCTTTGGCTGGAATACCGGGCAAGCATTTATCT
CTGGATAGCGGGCATCATCA

Product: putative TonB-dependent transmembrane receptor protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>739_residues
MKKMIFAGCLMAGASVFAQAGETDSLKVVNLQEVQIVSTRATSKTPVAFTNVSKEELKKQNFGQDIPFLLSMTPSALTTS
DAGAGIGYTTLRVRGTDGTRINITANGIPMNDAESHTLFWVNMPDFASSVKDIQVQRGAGTSTNGAGAFGASVNMQTEGI
SMQPYAEINASYGSFNAHKETVKFGTGLLKDHWAFDARLSNIGTDGYIDRASVDLYSFYAQGGYFADNTSVKFITFGGKE
KTYHAWNYATKEEMKKYGRRFNSCGMYTDDDGHIRFYKDQTDNYLQMNYQLLLNHTFSAAWNLNAALHYTKGDGYYQEYK
EDRSLKEYRLHPFMYDGKEVEKSDLIRQKKMDNHFGGGVFSVNYRNEKLDASLGGALNYYDGWHFGRVIWVKNYIGELLP
DHEYYRNKAKKTDGNLYLKANYNLVAGLNAYADLQYRYINYKIHGDNDKYDYNTDGLQKLAVNDHFNFFNPKAGLNWDID
SNNRVYASFSVAQKEPTRNNYTDGNADEYPKAEKLYDYELGYTYRNTWLSAGVNFYYMDYKDQLVLTGELNEIGEAMARN
VPDSYRTGVELMLGVKPCRWFQWDINGTLSKNRVKNFTEKLYEDEWKNPIEVEHGNTPIAFSPDFILNNRFSFSHKGFEA
ALQSQYVSKQYMSNAKQAEQTLDAYFVSNLNLAYTFQLRHVKSVTVGFTIYNLFNEKYENNGYAGSGYTLKDGKPERYNY
AGYAAQAGTNVMGNISIRF

Sequences:
NA

Specific function: NA

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA