| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is 59714350
Identifier: 59714350
GI number: 59714350
Start: 1322912
End: 1323577
Strand: Reverse
Name: 59714350
Synonym: VF_A1167
Alternate gene names: NA
Gene position: 1323577-1322912 (Counterclockwise)
Preceding gene: 59714351
Following gene: 59714349
Centisome position: 99.49
GC content: 35.14
Gene sequence:
>666_bases ATGAGAAGTCGATGGTTAGGAATACCATTCGCCATATTCTCTATCGCTTCTATTGCTTTAACACAACAAGAAAATATTTG GATCAAAGCAGTACAAGATGAATATGGCGAAAGAGCCGGAAAAAGAGTGTTAGCTTGGCGGGATATGTTAGCCGAAGCTG ATTTGAAGAATGAGAGAGAACAACTAAATAATGTGAATCAGTTTTTTAATCAACTCTATTTTGTAGATGATATAAAACTG TGGGGAAAAAAAGATTACTGGGCAACGCCTTTAGAGTTTCTTGGAGCAAATGCTGGAGATTGTGAAGACTTTACCATTGC TAAATATTTTTCTCTGATTGAGTTAGGCGTATCAGATAAAAAGTTAAGGCTTATTTACCTTAAGGCAATCGAGTTAAATC AGTTTCATATGGTACTGGCTTATTATCCAACACCAGCATCAGTCCCTTTAATTTTAGATAATATAGATAAAGAAATAAAA CCAGCAACAGAACGAACAGATCTTTTACCTATATACAGTTTTAACGGTCAACATCTATGGCTGATGAAAGGAAAAGGTAA TGGCCAGCAAGCTGGGAAGTCATCTCGTTTAAATCTATGGAATGATTTACGAAAACGAAATGATGACTTGAGATTAAATC ACCCAATTTTGAATTATGATGAGTAG
Upstream 100 bases:
>100_bases TTACAGGAAAACGTTCTATTTTAGATTACTTAGTGAAACCTATCGTTCAAGCAAAAGGATCTGCACTAAGAGAGTAAAAG TAAAAGGAGCACATCTCACA
Downstream 100 bases:
>100_bases TGAGAAATGACATTATATAAACAACTAGTAGCATGGATGACAGCTGTCTTTTTAATATTGATGATTTCTGTTTTTGCCAT TGAATTTCGAAATACACAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Transglutaminase Family Protein Cysteine Peptidase BTLCP; Periplasmic Protein-Like Protein; Sulfate Adenylyltransferase Small Subunit; Transglutaminase Domain Protein; Sulfate Adenylyltransferase; Lipoprotein
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MRSRWLGIPFAIFSIASIALTQQENIWIKAVQDEYGERAGKRVLAWRDMLAEADLKNEREQLNNVNQFFNQLYFVDDIKL WGKKDYWATPLEFLGANAGDCEDFTIAKYFSLIELGVSDKKLRLIYLKAIELNQFHMVLAYYPTPASVPLILDNIDKEIK PATERTDLLPIYSFNGQHLWLMKGKGNGQQAGKSSRLNLWNDLRKRNDDLRLNHPILNYDE
Sequences:
>Translated_221_residues MRSRWLGIPFAIFSIASIALTQQENIWIKAVQDEYGERAGKRVLAWRDMLAEADLKNEREQLNNVNQFFNQLYFVDDIKL WGKKDYWATPLEFLGANAGDCEDFTIAKYFSLIELGVSDKKLRLIYLKAIELNQFHMVLAYYPTPASVPLILDNIDKEIK PATERTDLLPIYSFNGQHLWLMKGKGNGQQAGKSSRLNLWNDLRKRNDDLRLNHPILNYDE >Mature_221_residues MRSRWLGIPFAIFSIASIALTQQENIWIKAVQDEYGERAGKRVLAWRDMLAEADLKNEREQLNNVNQFFNQLYFVDDIKL WGKKDYWATPLEFLGANAGDCEDFTIAKYFSLIELGVSDKKLRLIYLKAIELNQFHMVLAYYPTPASVPLILDNIDKEIK PATERTDLLPIYSFNGQHLWLMKGKGNGQQAGKSSRLNLWNDLRKRNDDLRLNHPILNYDE
Specific function: Unknown
COG id: COG3672
COG function: function code S; Predicted periplasmic protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25700; Mature: 25700
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSRWLGIPFAIFSIASIALTQQENIWIKAVQDEYGERAGKRVLAWRDMLAEADLKNERE CCCCCCCCHHHHHHHHHHHEECCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHCCCHHHHH QLNNVNQFFNQLYFVDDIKLWGKKDYWATPLEFLGANAGDCEDFTIAKYFSLIELGVSDK HHHHHHHHHHHEEEEEEEEECCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCCCCC KLRLIYLKAIELNQFHMVLAYYPTPASVPLILDNIDKEIKPATERTDLLPIYSFNGQHLW EEEEEEEEEEECCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCEEE LMKGKGNGQQAGKSSRLNLWNDLRKRNDDLRLNHPILNYDE EEECCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCC >Mature Secondary Structure MRSRWLGIPFAIFSIASIALTQQENIWIKAVQDEYGERAGKRVLAWRDMLAEADLKNERE CCCCCCCCHHHHHHHHHHHEECCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHCCCHHHHH QLNNVNQFFNQLYFVDDIKLWGKKDYWATPLEFLGANAGDCEDFTIAKYFSLIELGVSDK HHHHHHHHHHHEEEEEEEEECCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCCCCC KLRLIYLKAIELNQFHMVLAYYPTPASVPLILDNIDKEIKPATERTDLLPIYSFNGQHLW EEEEEEEEEEECCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCEEE LMKGKGNGQQAGKSSRLNLWNDLRKRNDDLRLNHPILNYDE EEECCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA