| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is 59714313
Identifier: 59714313
GI number: 59714313
Start: 1278903
End: 1279721
Strand: Reverse
Name: 59714313
Synonym: VF_A1130
Alternate gene names: NA
Gene position: 1279721-1278903 (Counterclockwise)
Preceding gene: 59714314
Following gene: 59714312
Centisome position: 96.2
GC content: 36.63
Gene sequence:
>819_bases ATGAGTTCTTCTAAAAATCAAATGAAAAAAGAGTATGATGCGGAGTATCGAGCTAAAAGAAAGCGCCGTAAGTTTGAGTT AATTGAACTTCATCATTCAATTGTTGAAGCTGAAAACAAAAAAAGACCTAAGACTCCATTTAAATTTGAATTTCGTTCTC GTCGTCTGTTTCGCAGTGGTCGCTGGGAGGTATTACCTCCAGAATATGCTCGGATATTAAAGTCTTTTGAAGAATTTATT GATAATCCTAATCGTTTCCCTGCATTAAATGCTTGGGGAGGAGAAGGTATGAATAATATTCAATCTAGAAGACTGGTAGC TAATGTACTTGCCTGCATCATTGTAAATACGGATTTGATCGGCGGTAGGATCGGCTTACCGACGGAAGCAGGCTTAAAAA CAGTTAGTTATGATTTCTTACAAGAAGATTATGCTTTACGATTTGGTCGCTATATTTCACCGAAATCGTTCGCAAAGGCT GTGTCATACTTAAAACGTGCCGGTTATTTATATAGTGAACGCATCAATGTATGCGTTGATGTTAAAGAGGGTACGATTCG AAGTGCTCCTGCTTATAAACAATTTACTGAGCGCTTTTTCTCAGATCTAAAAGTTGTTCGTTACAATAATATTTGTTCTT TAATTGTAGCCTCTCGAAAACGCCAGGAGAAAAAAGGGTTATGTTTTTCTTGGATTACATTTAGAACCATTTCATCAGGG ATTCAAGAAGTCTTTAATGTTCAAAAATTAAATCAATTTGCAGAGACTGTGAAAATTGTTTTTGAGGCATACTATCCCCC ATCTTCACCAGGTCCTTAG
Upstream 100 bases:
>100_bases GATTATTTTTGTTTTTGAAATTAAAATATCTAAAAAGATTTCTAATCTTATTAAAGATGTTTCACAGAAATAATTTATAC ACAATATAAGCTATATCAAT
Downstream 100 bases:
>100_bases TGGAGTTCCTTATACTTTCACAATAGTGAAGTTCTTTAATTGTCTATATATTCTATTTTTATTTTTCTACCCTAGTTCTC TTTATTTTTTCTAAATTACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MSSSKNQMKKEYDAEYRAKRKRRKFELIELHHSIVEAENKKRPKTPFKFEFRSRRLFRSGRWEVLPPEYARILKSFEEFI DNPNRFPALNAWGGEGMNNIQSRRLVANVLACIIVNTDLIGGRIGLPTEAGLKTVSYDFLQEDYALRFGRYISPKSFAKA VSYLKRAGYLYSERINVCVDVKEGTIRSAPAYKQFTERFFSDLKVVRYNNICSLIVASRKRQEKKGLCFSWITFRTISSG IQEVFNVQKLNQFAETVKIVFEAYYPPSSPGP
Sequences:
>Translated_272_residues MSSSKNQMKKEYDAEYRAKRKRRKFELIELHHSIVEAENKKRPKTPFKFEFRSRRLFRSGRWEVLPPEYARILKSFEEFI DNPNRFPALNAWGGEGMNNIQSRRLVANVLACIIVNTDLIGGRIGLPTEAGLKTVSYDFLQEDYALRFGRYISPKSFAKA VSYLKRAGYLYSERINVCVDVKEGTIRSAPAYKQFTERFFSDLKVVRYNNICSLIVASRKRQEKKGLCFSWITFRTISSG IQEVFNVQKLNQFAETVKIVFEAYYPPSSPGP >Mature_271_residues SSSKNQMKKEYDAEYRAKRKRRKFELIELHHSIVEAENKKRPKTPFKFEFRSRRLFRSGRWEVLPPEYARILKSFEEFID NPNRFPALNAWGGEGMNNIQSRRLVANVLACIIVNTDLIGGRIGLPTEAGLKTVSYDFLQEDYALRFGRYISPKSFAKAV SYLKRAGYLYSERINVCVDVKEGTIRSAPAYKQFTERFFSDLKVVRYNNICSLIVASRKRQEKKGLCFSWITFRTISSGI QEVFNVQKLNQFAETVKIVFEAYYPPSSPGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31606; Mature: 31475
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSKNQMKKEYDAEYRAKRKRRKFELIELHHSIVEAENKKRPKTPFKFEFRSRRLFRSG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC RWEVLPPEYARILKSFEEFIDNPNRFPALNAWGGEGMNNIQSRRLVANVLACIIVNTDLI CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHC GGRIGLPTEAGLKTVSYDFLQEDYALRFGRYISPKSFAKAVSYLKRAGYLYSERINVCVD CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHCCCCEEEE VKEGTIRSAPAYKQFTERFFSDLKVVRYNNICSLIVASRKRQEKKGLCFSWITFRTISSG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH IQEVFNVQKLNQFAETVKIVFEAYYPPSSPGP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SSSKNQMKKEYDAEYRAKRKRRKFELIELHHSIVEAENKKRPKTPFKFEFRSRRLFRSG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC RWEVLPPEYARILKSFEEFIDNPNRFPALNAWGGEGMNNIQSRRLVANVLACIIVNTDLI CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHC GGRIGLPTEAGLKTVSYDFLQEDYALRFGRYISPKSFAKAVSYLKRAGYLYSERINVCVD CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHCCCCEEEE VKEGTIRSAPAYKQFTERFFSDLKVVRYNNICSLIVASRKRQEKKGLCFSWITFRTISSG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH IQEVFNVQKLNQFAETVKIVFEAYYPPSSPGP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA