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The map label for this gene is 59714294

Identifier: 59714294

GI number: 59714294

Start: 1252312

End: 1253151

Strand: Reverse

Name: 59714294

Synonym: VF_A1111

Alternate gene names: NA

Gene position: 1253151-1252312 (Counterclockwise)

Preceding gene: 59714295

Following gene: 59714293

Centisome position: 94.2

GC content: 38.69

Gene sequence:

>840_bases
ATGTATCGACACCTCTTTTTGCTCCTCATTACTCTTTTTACTTCATTGTCATTACAAGCAGAAGAAGTAACGTATTCTGA
ACAAGAGTATTTAGACCGCCCGTTAATGGAGCGTTATATTCTTGATGAGTTGAAGTCATTAAGAACTGAACAACAAGACT
TAGAACGTAGAATGACGATACAAATTACCGATCGCGAATTAGCGGTTGCTGATAAATCATTAAATTACTCTAATACAACC
GTAACTTACTTTTTCTATGTTATTGCAGCGGTTGCTTCTTTGATTGCATTGATTGGTTGGCAATCATTAAGAGAGATGAA
GCAAAACACCAAAGAAATGGCAGATAAACAACTTAATAAAATAGCGGAAGACTATGAGAAGAAGTTTGTTGCATTAGAGC
GTGACCTAAAGCGTAAAACGCGCATTATTACCGAGAATAACCGTGAAATTGAAATCATTAATGAAGTGCACAATTTATGG
CTCCGTGCTCAAAGTGTGCAAACCCCTGAGCAGAAAATGGATATTTATGATGAGATTTTAAAGGTAAGACCGGGTGATTT
AGAAGCGTTAACGTATAAAGCGGATGCGGCAATGGAGATGCGTGAATTCCATTGGGCTTTGAATTTATGTAATCGTGTTT
TAGAAGTGGATGATCAAAATGCACATGCACTATTCCAGCGAGCATGTGCATATGCGCAATTAGGGGCAGAAGTGCAAGCC
ATTGATGACTTGCAGCGTTCTATTGAGGCGAGTACGTCTATGCGTGAACTTGTATTAGAAGAGCCTGATTTTGACCCTTT
AAGAGGCTTGGAGCGCTTTGAAACTCTATTAGAAGAGTAA

Upstream 100 bases:

>100_bases
GGATTTTAATTGGTTTCCTTTGTTAATTGGGTGTTGCTGCCTTGGATGTGTTATCTTTATGTATATCACCTTTAAATACA
CGATTAATAAGGGTATCCCT

Downstream 100 bases:

>100_bases
TACCTATCAATCACCAAGGTGTTCAGAGATGAAGTCCATAAAGCATCGCACCTTGGCCGACATATGTTTTCGGCTTGGAT
AAACCATAAAGATATCAATA

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Repeat Containing Protein; Tetratricopeptide Domain Protein; TPR Protein; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MYRHLFLLLITLFTSLSLQAEEVTYSEQEYLDRPLMERYILDELKSLRTEQQDLERRMTIQITDRELAVADKSLNYSNTT
VTYFFYVIAAVASLIALIGWQSLREMKQNTKEMADKQLNKIAEDYEKKFVALERDLKRKTRIITENNREIEIINEVHNLW
LRAQSVQTPEQKMDIYDEILKVRPGDLEALTYKADAAMEMREFHWALNLCNRVLEVDDQNAHALFQRACAYAQLGAEVQA
IDDLQRSIEASTSMRELVLEEPDFDPLRGLERFETLLEE

Sequences:

>Translated_279_residues
MYRHLFLLLITLFTSLSLQAEEVTYSEQEYLDRPLMERYILDELKSLRTEQQDLERRMTIQITDRELAVADKSLNYSNTT
VTYFFYVIAAVASLIALIGWQSLREMKQNTKEMADKQLNKIAEDYEKKFVALERDLKRKTRIITENNREIEIINEVHNLW
LRAQSVQTPEQKMDIYDEILKVRPGDLEALTYKADAAMEMREFHWALNLCNRVLEVDDQNAHALFQRACAYAQLGAEVQA
IDDLQRSIEASTSMRELVLEEPDFDPLRGLERFETLLEE
>Mature_279_residues
MYRHLFLLLITLFTSLSLQAEEVTYSEQEYLDRPLMERYILDELKSLRTEQQDLERRMTIQITDRELAVADKSLNYSNTT
VTYFFYVIAAVASLIALIGWQSLREMKQNTKEMADKQLNKIAEDYEKKFVALERDLKRKTRIITENNREIEIINEVHNLW
LRAQSVQTPEQKMDIYDEILKVRPGDLEALTYKADAAMEMREFHWALNLCNRVLEVDDQNAHALFQRACAYAQLGAEVQA
IDDLQRSIEASTSMRELVLEEPDFDPLRGLERFETLLEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32811; Mature: 32811

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRHLFLLLITLFTSLSLQAEEVTYSEQEYLDRPLMERYILDELKSLRTEQQDLERRMTI
CHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
QITDRELAVADKSLNYSNTTVTYFFYVIAAVASLIALIGWQSLREMKQNTKEMADKQLNK
EECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAEDYEKKFVALERDLKRKTRIITENNREIEIINEVHNLWLRAQSVQTPEQKMDIYDEIL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
KVRPGDLEALTYKADAAMEMREFHWALNLCNRVLEVDDQNAHALFQRACAYAQLGAEVQA
HCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHH
IDDLQRSIEASTSMRELVLEEPDFDPLRGLERFETLLEE
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MYRHLFLLLITLFTSLSLQAEEVTYSEQEYLDRPLMERYILDELKSLRTEQQDLERRMTI
CHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
QITDRELAVADKSLNYSNTTVTYFFYVIAAVASLIALIGWQSLREMKQNTKEMADKQLNK
EECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAEDYEKKFVALERDLKRKTRIITENNREIEIINEVHNLWLRAQSVQTPEQKMDIYDEIL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
KVRPGDLEALTYKADAAMEMREFHWALNLCNRVLEVDDQNAHALFQRACAYAQLGAEVQA
HCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHH
IDDLQRSIEASTSMRELVLEEPDFDPLRGLERFETLLEE
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA