| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is 59714129
Identifier: 59714129
GI number: 59714129
Start: 1066541
End: 1066984
Strand: Reverse
Name: 59714129
Synonym: VF_A0946
Alternate gene names: NA
Gene position: 1066984-1066541 (Counterclockwise)
Preceding gene: 59714130
Following gene: 59714128
Centisome position: 80.2
GC content: 35.36
Gene sequence:
>444_bases ATGATAGGGAAAACACACAACATATGGAATCTGAAAGCCCTTCTAGGTTGGGATGGTGGTGAGCGGTTTCATTCAGGGTA TTCAATTAATAGTGACGAATTACCTGCTTCTTTTTATATTCGTTGGCATTCATTAGCGAACAAGAAAACATATAATAAAA CGATTAAAGTATCAGAAGATATACGAAATAAAATGCGTGAATACCACGATATACGCTGTGGCTATTATGATTTATTACTC CCATATAAAGATAATATTTTATTAGGTTTAGCTCCTGATGGAATGATATCTGTATTTCTTAATGGTGGATGCTTTGATAA TGAGCTTCAATTCAAAGTACAAGCAGTAGAGTATAAAGTCGCTGATGATTTTGTTTACCCAGAGTTAAGCGAAGAAGCAC AATCTTATGTTGATGAGCATGGTGTGCCCGTTGGTATTTGGTGA
Upstream 100 bases:
>100_bases CCTCCCTGAAATAGTTACACACCAGGTCAAGTAGGGGATATATTCTTAAATTGGGATAGCTATGGATTGTGGAGAGGAGA AAAAGGTTGGATGAAGGGGA
Downstream 100 bases:
>100_bases GTATTGTGAGCAACATTCATAAGTCTTTTTTCATTATTTTTTGTTTATTCGTTTCTGCTTGTTCAACAAATAGCCAAATT AAATCGAAACAGTTAAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MIGKTHNIWNLKALLGWDGGERFHSGYSINSDELPASFYIRWHSLANKKTYNKTIKVSEDIRNKMREYHDIRCGYYDLLL PYKDNILLGLAPDGMISVFLNGGCFDNELQFKVQAVEYKVADDFVYPELSEEAQSYVDEHGVPVGIW
Sequences:
>Translated_147_residues MIGKTHNIWNLKALLGWDGGERFHSGYSINSDELPASFYIRWHSLANKKTYNKTIKVSEDIRNKMREYHDIRCGYYDLLL PYKDNILLGLAPDGMISVFLNGGCFDNELQFKVQAVEYKVADDFVYPELSEEAQSYVDEHGVPVGIW >Mature_147_residues MIGKTHNIWNLKALLGWDGGERFHSGYSINSDELPASFYIRWHSLANKKTYNKTIKVSEDIRNKMREYHDIRCGYYDLLL PYKDNILLGLAPDGMISVFLNGGCFDNELQFKVQAVEYKVADDFVYPELSEEAQSYVDEHGVPVGIW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16957; Mature: 16957
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGKTHNIWNLKALLGWDGGERFHSGYSINSDELPASFYIRWHSLANKKTYNKTIKVSED CCCCCCCEEEEEEEEECCCCCHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEHHH IRNKMREYHDIRCGYYDLLLPYKDNILLGLAPDGMISVFLNGGCFDNELQFKVQAVEYKV HHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCEEEEEECCCEECCCEEEEEEEEEEEE ADDFVYPELSEEAQSYVDEHGVPVGIW CCCCCCCCHHHHHHHHHHHCCCEEECC >Mature Secondary Structure MIGKTHNIWNLKALLGWDGGERFHSGYSINSDELPASFYIRWHSLANKKTYNKTIKVSED CCCCCCCEEEEEEEEECCCCCHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEHHH IRNKMREYHDIRCGYYDLLLPYKDNILLGLAPDGMISVFLNGGCFDNELQFKVQAVEYKV HHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCEEEEEECCCEECCCEEEEEEEEEEEE ADDFVYPELSEEAQSYVDEHGVPVGIW CCCCCCCCHHHHHHHHHHHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA