| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is bcsZ [H]
Identifier: 59714065
GI number: 59714065
Start: 996424
End: 997602
Strand: Reverse
Name: bcsZ [H]
Synonym: VF_A0882
Alternate gene names: 59714065
Gene position: 997602-996424 (Counterclockwise)
Preceding gene: 59714066
Following gene: 59714064
Centisome position: 74.99
GC content: 38.25
Gene sequence:
>1179_bases ATGAAAATGCAATTAACGGTATTGAGTCTATTAATTGGCACGTTAACTTGCTCTTCTTCAGCTATTGCTCAAGATGAAAA TTACACAACCCCAATCGTTTCATCTGCCGCACTAACAAAAGAGAATCAGTGTGAATGGGGGCAATGGGAAAGCTTTAAAC AACATTATATAGAGAATGGTCGAGTCGTTGATAACAGTGATCCTCGTTTAATAACGACATCAGAAGGTCAATCTTATGCT CTATTTTTTGCATTAATTGCGAATGATAAAAAAACATTTGATGAATTACTTGGTTGGACTGAGTTGCATTTAGCTGGGGG GGATCTAACAGCACAACTCCCTGCTTGGTTATGGGGAAGGCAACCTGATGGCTCGCAAGGTATTTTAGACTCAAACTCAG CAGCTGACTCAGATTTATGGATTGCTTATAGTCTACTCGAAGCCGGAAGATTGTGGGATAACCATTATTATCAATCTCTT GGACATTTACTGGCTAGTCGAATTTTACGTGACGAAACCATCAAAGTGTCAGGTCTTGGAACGGTATTATTGCCAGGAAA AGTGGGATTTGTATTGGGTAAAAATCATGTTCGATTAAACCCAAGCTACGTCCCATTGCAGTTGCTAACTCGAATGAATA CGGTTTTCCCTAGCTACCAATGGGAAGAAATATATCAATCAAGCGCAAAATTACTAAAAGAAACCATGCCAAAAGGCTAT AGTCCTGATTGGGTTGAGTGGGATAAAACTCAATTTAAAAAAGATTCAAAGACCCAAAGTGTTGGCAGCTATAATGCGAT TAGAGTGTATTTATGGGCAGGAATGCTACCAGATAGCGACCCTAATAAAGCATTGTTACTTGATAAAATGAAGCCATTAG TTCGTGTTATAGAAAGAAATAAAGGCATGCCTGAGACAATAAATGTGCTAACAGGAAAAGGTAAAAATCAAGGTGGCGTC GGAATGAACGCAGCTATTTTGCCTTTATTATCTTCGTTAGATTCAAATACAAATGCCGTTGAATATGAGAAAAAGATCCA AGCAGAATTGTCGAAGATTGAAAGTGATTATTACTATAACAGTGTGCTGACTTTATTCGGCCTTGGCTGGTATCAAGATT TATACTCTTTTAATGATGATGGCAGCGTTACTCCTAAGTGGGTTAATGTATGTCAGTAA
Upstream 100 bases:
>100_bases CTTTGCTTGCCGCCTTATTAGTTGTAATGGTCACAATTATTTTATTTAGAGTACTTCGCCGTATCGCCAAAAATCGTTTA AACACAGAGGAAGATGAATA
Downstream 100 bases:
>100_bases GCAAATACCGCCTTAAACAATTTGTTTCTTTTGCTATGCTGGGGGCTATGTATTCATCGCCAGTTTCTGCTGTATCATTG AATCGAGATATCAATAACCA
Product: endo-1,4-D-glucanase
Products: NA
Alternate protein names: Carboxymethylcellulase; CMCase; Cellulase; Endo-1,4-beta-glucanase [H]
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MKMQLTVLSLLIGTLTCSSSAIAQDENYTTPIVSSAALTKENQCEWGQWESFKQHYIENGRVVDNSDPRLITTSEGQSYA LFFALIANDKKTFDELLGWTELHLAGGDLTAQLPAWLWGRQPDGSQGILDSNSAADSDLWIAYSLLEAGRLWDNHYYQSL GHLLASRILRDETIKVSGLGTVLLPGKVGFVLGKNHVRLNPSYVPLQLLTRMNTVFPSYQWEEIYQSSAKLLKETMPKGY SPDWVEWDKTQFKKDSKTQSVGSYNAIRVYLWAGMLPDSDPNKALLLDKMKPLVRVIERNKGMPETINVLTGKGKNQGGV GMNAAILPLLSSLDSNTNAVEYEKKIQAELSKIESDYYYNSVLTLFGLGWYQDLYSFNDDGSVTPKWVNVCQ
Sequences:
>Translated_392_residues MKMQLTVLSLLIGTLTCSSSAIAQDENYTTPIVSSAALTKENQCEWGQWESFKQHYIENGRVVDNSDPRLITTSEGQSYA LFFALIANDKKTFDELLGWTELHLAGGDLTAQLPAWLWGRQPDGSQGILDSNSAADSDLWIAYSLLEAGRLWDNHYYQSL GHLLASRILRDETIKVSGLGTVLLPGKVGFVLGKNHVRLNPSYVPLQLLTRMNTVFPSYQWEEIYQSSAKLLKETMPKGY SPDWVEWDKTQFKKDSKTQSVGSYNAIRVYLWAGMLPDSDPNKALLLDKMKPLVRVIERNKGMPETINVLTGKGKNQGGV GMNAAILPLLSSLDSNTNAVEYEKKIQAELSKIESDYYYNSVLTLFGLGWYQDLYSFNDDGSVTPKWVNVCQ >Mature_392_residues MKMQLTVLSLLIGTLTCSSSAIAQDENYTTPIVSSAALTKENQCEWGQWESFKQHYIENGRVVDNSDPRLITTSEGQSYA LFFALIANDKKTFDELLGWTELHLAGGDLTAQLPAWLWGRQPDGSQGILDSNSAADSDLWIAYSLLEAGRLWDNHYYQSL GHLLASRILRDETIKVSGLGTVLLPGKVGFVLGKNHVRLNPSYVPLQLLTRMNTVFPSYQWEEIYQSSAKLLKETMPKGY SPDWVEWDKTQFKKDSKTQSVGSYNAIRVYLWAGMLPDSDPNKALLLDKMKPLVRVIERNKGMPETINVLTGKGKNQGGV GMNAAILPLLSSLDSNTNAVEYEKKIQAELSKIESDYYYNSVLTLFGLGWYQDLYSFNDDGSVTPKWVNVCQ
Specific function: Hydrolyzes carboxymethylcellulose [H]
COG id: COG3405
COG function: function code G; Endoglucanase Y
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 8 (cellulase D) family [H]
Homologues:
Organism=Escherichia coli, GI1789951, Length=361, Percent_Identity=46.5373961218837, Blast_Score=325, Evalue=3e-90,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR002037 - InterPro: IPR019834 [H]
Pfam domain/function: PF01270 Glyco_hydro_8 [H]
EC number: =3.2.1.4 [H]
Molecular weight: Translated: 43919; Mature: 43919
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: PS00589 PTS_HPR_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMQLTVLSLLIGTLTCSSSAIAQDENYTTPIVSSAALTKENQCEWGQWESFKQHYIENG CCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCC RVVDNSDPRLITTSEGQSYALFFALIANDKKTFDELLGWTELHLAGGDLTAQLPAWLWGR EEEECCCCCEEECCCCCCEEEEEEEECCCHHHHHHHCCCEEEEEECCCCCCCCHHHHCCC QPDGSQGILDSNSAADSDLWIAYSLLEAGRLWDNHYYQSLGHLLASRILRDETIKVSGLG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC TVLLPGKVGFVLGKNHVRLNPSYVPLQLLTRMNTVFPSYQWEEIYQSSAKLLKETMPKGY EEEECCCEEEEECCCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC SPDWVEWDKTQFKKDSKTQSVGSYNAIRVYLWAGMLPDSDPNKALLLDKMKPLVRVIERN CCCCCCCCHHHHCCCCCHHCCCCCCEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHC KGMPETINVLTGKGKNQGGVGMNAAILPLLSSLDSNTNAVEYEKKIQAELSKIESDYYYN CCCCCEEHEEECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH SVLTLFGLGWYQDLYSFNDDGSVTPKWVNVCQ HHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCC >Mature Secondary Structure MKMQLTVLSLLIGTLTCSSSAIAQDENYTTPIVSSAALTKENQCEWGQWESFKQHYIENG CCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCC RVVDNSDPRLITTSEGQSYALFFALIANDKKTFDELLGWTELHLAGGDLTAQLPAWLWGR EEEECCCCCEEECCCCCCEEEEEEEECCCHHHHHHHCCCEEEEEECCCCCCCCHHHHCCC QPDGSQGILDSNSAADSDLWIAYSLLEAGRLWDNHYYQSLGHLLASRILRDETIKVSGLG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC TVLLPGKVGFVLGKNHVRLNPSYVPLQLLTRMNTVFPSYQWEEIYQSSAKLLKETMPKGY EEEECCCEEEEECCCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC SPDWVEWDKTQFKKDSKTQSVGSYNAIRVYLWAGMLPDSDPNKALLLDKMKPLVRVIERN CCCCCCCCHHHHCCCCCHHCCCCCCEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHC KGMPETINVLTGKGKNQGGVGMNAAILPLLSSLDSNTNAVEYEKKIQAELSKIESDYYYN CCCCCEEHEEECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH SVLTLFGLGWYQDLYSFNDDGSVTPKWVNVCQ HHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]