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The map label for this gene is ylaB [H]

Identifier: 59714062

GI number: 59714062

Start: 990562

End: 991449

Strand: Reverse

Name: ylaB [H]

Synonym: VF_A0879

Alternate gene names: 59714062

Gene position: 991449-990562 (Counterclockwise)

Preceding gene: 59714064

Following gene: 59714060

Centisome position: 74.53

GC content: 30.52

Gene sequence:

>888_bases
ATGCCTACTTATACGTTCAAAAACCAAATTATTACTTGTATAGCGAATATATGTGATGAGGTGCTTGGTGTACTAACACG
GCGTCTTGCTAGAATAGAGGTTAATATGTATGACTATTTTCATTATAAAGAAAAAAAATATTATTTTTTTTGCAATAAGA
TGATAGCTAAAGAGTTTTTATATTCTACTTCTTTTGGCGAATTAAAAAAAATAGTCGACAATAAATTAATAACAACATAC
GTCCAAGAAATAATTAAGGTACCTAAGTATGAAGTCGTTGGTTATGAAGCTTTATCACGAGGCCCTGCTAATTCGAGTTT
ATTCTCTGCGAAAAATTTATTTGATGAAGCTAAGAATCAAGACATTAAATATGAATTCGAATTTCTTTGTATTATTAATG
CATTAGCACTAATGAATTCTATGAAAGATGATACTTTTTTAACGATTAATATGTCACCATTGTTATTGTTGGATAAAACT
ATCTTAGCTGTGTTATACGGCGTTAAGCGTTTGAAAATAGAATTGACAGAGAATACACCTATTACTTATTGGCCTCCTTT
TTTATTTGTTATTTCTAGGTTGCAAAATGAAGGGATTGATGTTTGGCTTGATGATGTTGAATCTGGTTTTTTTGATTTTG
AAACTGTCAATACAGTTAAGCCAAAAGTTGCTAAGTTATGTATGTCAATAGTGAAAAGAGCATGTTCTGATGTTTTGTAT
TTTTGTATTTTAAGAAAAGCAATTAAAGAAATGCAAAATATCGGAGTTGAAATTGTAGCTGAAGGTATTGAAACTGCATT
TCAAGCAGAGCTGATGCGAACTATAGGGGTTAATTATATGCAAGGGTATTTTTTTTCAAAGCCTCGTGATGCATTATCAG
CGTTCTGA

Upstream 100 bases:

>100_bases
GGAGGATATATTAGATAGAGTTAAGAAAAAAAGTGAGCTTTCTTTAATTCAAGATGATTTTGGTTACGATGAATTTCATG
TACTCGTTAGAGGCAGTTCT

Downstream 100 bases:

>100_bases
ATTTAAATATACCACAAGGCTCGAATATGGTGGAAGCTATTGAATCATCATTTTTTTTCTATTAAGTGGTTTATCTTCAT
TATGTTTTTATGATGCGATT

Product: EAL domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MPTYTFKNQIITCIANICDEVLGVLTRRLARIEVNMYDYFHYKEKKYYFFCNKMIAKEFLYSTSFGELKKIVDNKLITTY
VQEIIKVPKYEVVGYEALSRGPANSSLFSAKNLFDEAKNQDIKYEFEFLCIINALALMNSMKDDTFLTINMSPLLLLDKT
ILAVLYGVKRLKIELTENTPITYWPPFLFVISRLQNEGIDVWLDDVESGFFDFETVNTVKPKVAKLCMSIVKRACSDVLY
FCILRKAIKEMQNIGVEIVAEGIETAFQAELMRTIGVNYMQGYFFSKPRDALSAF

Sequences:

>Translated_295_residues
MPTYTFKNQIITCIANICDEVLGVLTRRLARIEVNMYDYFHYKEKKYYFFCNKMIAKEFLYSTSFGELKKIVDNKLITTY
VQEIIKVPKYEVVGYEALSRGPANSSLFSAKNLFDEAKNQDIKYEFEFLCIINALALMNSMKDDTFLTINMSPLLLLDKT
ILAVLYGVKRLKIELTENTPITYWPPFLFVISRLQNEGIDVWLDDVESGFFDFETVNTVKPKVAKLCMSIVKRACSDVLY
FCILRKAIKEMQNIGVEIVAEGIETAFQAELMRTIGVNYMQGYFFSKPRDALSAF
>Mature_294_residues
PTYTFKNQIITCIANICDEVLGVLTRRLARIEVNMYDYFHYKEKKYYFFCNKMIAKEFLYSTSFGELKKIVDNKLITTYV
QEIIKVPKYEVVGYEALSRGPANSSLFSAKNLFDEAKNQDIKYEFEFLCIINALALMNSMKDDTFLTINMSPLLLLDKTI
LAVLYGVKRLKIELTENTPITYWPPFLFVISRLQNEGIDVWLDDVESGFFDFETVNTVKPKVAKLCMSIVKRACSDVLYF
CILRKAIKEMQNIGVEIVAEGIETAFQAELMRTIGVNYMQGYFFSKPRDALSAF

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI87081743, Length=241, Percent_Identity=26.9709543568465, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1786507, Length=119, Percent_Identity=32.7731092436975, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1790496, Length=241, Percent_Identity=22.8215767634855, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI87082096, Length=180, Percent_Identity=25, Blast_Score=61, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633 [H]

Pfam domain/function: PF00563 EAL [H]

EC number: NA

Molecular weight: Translated: 34099; Mature: 33968

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTYTFKNQIITCIANICDEVLGVLTRRLARIEVNMYDYFHYKEKKYYFFCNKMIAKEFL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHEEECCCHHHHHHHHHHHHHH
YSTSFGELKKIVDNKLITTYVQEIIKVPKYEVVGYEALSRGPANSSLFSAKNLFDEAKNQ
HCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHCCCCCCHHHHHHHHHHHHCCC
DIKYEFEFLCIINALALMNSMKDDTFLTINMSPLLLLDKTILAVLYGVKRLKIELTENTP
CCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHEEEEEECCCC
ITYWPPFLFVISRLQNEGIDVWLDDVESGFFDFETVNTVKPKVAKLCMSIVKRACSDVLY
CEECCHHHHHHHHHHCCCCEEEEHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHH
FCILRKAIKEMQNIGVEIVAEGIETAFQAELMRTIGVNYMQGYFFSKPRDALSAF
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHCCC
>Mature Secondary Structure 
PTYTFKNQIITCIANICDEVLGVLTRRLARIEVNMYDYFHYKEKKYYFFCNKMIAKEFL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHEEECCCHHHHHHHHHHHHHH
YSTSFGELKKIVDNKLITTYVQEIIKVPKYEVVGYEALSRGPANSSLFSAKNLFDEAKNQ
HCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHCCCCCCHHHHHHHHHHHHCCC
DIKYEFEFLCIINALALMNSMKDDTFLTINMSPLLLLDKTILAVLYGVKRLKIELTENTP
CCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHEEEEEECCCC
ITYWPPFLFVISRLQNEGIDVWLDDVESGFFDFETVNTVKPKVAKLCMSIVKRACSDVLY
CEECCHHHHHHHHHHCCCCEEEEHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHH
FCILRKAIKEMQNIGVEIVAEGIETAFQAELMRTIGVNYMQGYFFSKPRDALSAF
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]