Definition Vibrio fischeri ES114 chromosome chromosome II, complete sequence.
Accession NC_006841
Length 1,330,333

Click here to switch to the map view.

The map label for this gene is 59714037

Identifier: 59714037

GI number: 59714037

Start: 964137

End: 964781

Strand: Reverse

Name: 59714037

Synonym: VF_A0854

Alternate gene names: NA

Gene position: 964781-964137 (Counterclockwise)

Preceding gene: 172087818

Following gene: 59714034

Centisome position: 72.52

GC content: 33.49

Gene sequence:

>645_bases
ATGGCGATACAACTTGTATTAGCGAGTTCTATTTTTTATTTAGGTTATACAATTTACTCTTTTACACACTCAATAAATAC
GGTTGTGGATCAATATCCAGAATTAATGAAAGAAGTAAATAAAACGGCTGATAAGTTAGAGATAGAACAATGGTTACTTT
TGGCTCAGCATCTTGAAGAGTTAACGCCTCAAGCTCTTGAGTTAGTCAATGAAGTCAAAAATACCATTAATGATGTTAAT
CAAACAGTTGCTTCTGTTGATAGCAAAATTCCATTGATTCTTAATGAAGTGCAATCTATCAGAACTGAATCATTACCAGA
AGTTATTACTGTAATGAATGCAGTAAATAAAGAGACAGTACCAAATACATTAATTGAACTGAAAAATTATCGTGAACAGG
TATTCCCAAAAGCGTTTGTTGAAAGTAAAGGTTACCGCATAACAACGATTCCTGCGGTATTAAAAGAGTCTGAAAAGCTG
CGTAAAGAAGTTCCTCCTATTATGCTAAAAGCAGATCAAATCATTGATAAAACAGAAGAACTTTCTCAACAAGCGACTCA
AGGTGCGGTAAAAGGGGTAATCATGTCACCATTTAATTTATTAAAAGAAGCCGGAAATGAAATTCAGTCTAAGGTGAATG
AGTAG

Upstream 100 bases:

>100_bases
TTGCGTTAGCTTAACGATTATTCATGTATTTCTAGTAACTAATAACGTAAAGTAGTTCTATCTTTTATTTATGGATTAAT
ACGTTATGGCTCGATTGGGA

Downstream 100 bases:

>100_bases
TTTCTTATAAACATTACTAATTATGATAATAGCATTTTATTAAGTTTATTCTTTTGAGGTGCTATTAATAAATTATGCCC
ATCTGCAACAATACGCGACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MAIQLVLASSIFYLGYTIYSFTHSINTVVDQYPELMKEVNKTADKLEIEQWLLLAQHLEELTPQALELVNEVKNTINDVN
QTVASVDSKIPLILNEVQSIRTESLPEVITVMNAVNKETVPNTLIELKNYREQVFPKAFVESKGYRITTIPAVLKESEKL
RKEVPPIMLKADQIIDKTEELSQQATQGAVKGVIMSPFNLLKEAGNEIQSKVNE

Sequences:

>Translated_214_residues
MAIQLVLASSIFYLGYTIYSFTHSINTVVDQYPELMKEVNKTADKLEIEQWLLLAQHLEELTPQALELVNEVKNTINDVN
QTVASVDSKIPLILNEVQSIRTESLPEVITVMNAVNKETVPNTLIELKNYREQVFPKAFVESKGYRITTIPAVLKESEKL
RKEVPPIMLKADQIIDKTEELSQQATQGAVKGVIMSPFNLLKEAGNEIQSKVNE
>Mature_213_residues
AIQLVLASSIFYLGYTIYSFTHSINTVVDQYPELMKEVNKTADKLEIEQWLLLAQHLEELTPQALELVNEVKNTINDVNQ
TVASVDSKIPLILNEVQSIRTESLPEVITVMNAVNKETVPNTLIELKNYREQVFPKAFVESKGYRITTIPAVLKESEKLR
KEVPPIMLKADQIIDKTEELSQQATQGAVKGVIMSPFNLLKEAGNEIQSKVNE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24127; Mature: 23996

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIQLVLASSIFYLGYTIYSFTHSINTVVDQYPELMKEVNKTADKLEIEQWLLLAQHLEE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTPQALELVNEVKNTINDVNQTVASVDSKIPLILNEVQSIRTESLPEVITVMNAVNKETV
HCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PNTLIELKNYREQVFPKAFVESKGYRITTIPAVLKESEKLRKEVPPIMLKADQIIDKTEE
HHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LSQQATQGAVKGVIMSPFNLLKEAGNEIQSKVNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AIQLVLASSIFYLGYTIYSFTHSINTVVDQYPELMKEVNKTADKLEIEQWLLLAQHLEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTPQALELVNEVKNTINDVNQTVASVDSKIPLILNEVQSIRTESLPEVITVMNAVNKETV
HCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PNTLIELKNYREQVFPKAFVESKGYRITTIPAVLKESEKLRKEVPPIMLKADQIIDKTEE
HHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LSQQATQGAVKGVIMSPFNLLKEAGNEIQSKVNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA