| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
Click here to switch to the map view.
The map label for this gene is tag [H]
Identifier: 59713998
GI number: 59713998
Start: 920693
End: 921262
Strand: Reverse
Name: tag [H]
Synonym: VF_A0815
Alternate gene names: 59713998
Gene position: 921262-920693 (Counterclockwise)
Preceding gene: 59714003
Following gene: 59713997
Centisome position: 69.25
GC content: 33.33
Gene sequence:
>570_bases ATGAGAAAAGAGCGATGTCACTGGGCAGAGGTTTCTGATTTAGATAGGGAATATCATGATAATGAATGGGGGGTACCTGT TTATTCTGATCATGAGTTATTCGAGTATTTAATTTTAGAAGGAGCTCAGGCTGGCTTAAGTTGGTCGACGATTTTAAAGA AACGTGAAGGCTACCGATTATTATTTGATGGTTTTGATTTACAAAAGATCATTCAATATGATCAAGATAAAGTGGAATCT TTAATGCAAGATTCCAGAATTATACGTAATCGACTTAAAATTAATTCGGTGATTACGAATGCGAATGCCTTTATAAAGAT ACAACAAGAATTTGGCAGTTTTTCAAATTACCTTTGGTCTTATGTCGATCAAAAACCGATCATTAATCACTGGGAAGTGA TTAATGATGTACCTGCAACAACCGAATTATCAGATAAATTAAGTAAAGATTTAAAAAAGAGAGGTTTTAAGTTTGTAGGA TCTACGATTTGCTATGCCTTTCTACAAGCAACAGGGGTTGTAAATGATCACTTGGTAAATTGTCCTTGTTATGCTAAAAA TAACAAATAA
Upstream 100 bases:
>100_bases AACTGGTTAATGAATGGTAACATAAGTTAAATTTTGGATATGCATGCATTATCTGTTGTGTGAGCTCAGTTAAATTGTAT ATAAAAAAGGTGGTAAGGAA
Downstream 100 bases:
>100_bases ATAACAATTGGATGTTTTGTTAAGTGAGATAGGCGAGCCAAGGAGGGGATATGAATAAAAAATCCTTACCAAATGTTGAT GAAAAAATTATTGATACAGT
Product: 3-methyl-adenine DNA glycosylase I, constitutive
Products: NA
Alternate protein names: GMP synthetase; Glutamine amidotransferase [H]
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MRKERCHWAEVSDLDREYHDNEWGVPVYSDHELFEYLILEGAQAGLSWSTILKKREGYRLLFDGFDLQKIIQYDQDKVES LMQDSRIIRNRLKINSVITNANAFIKIQQEFGSFSNYLWSYVDQKPIINHWEVINDVPATTELSDKLSKDLKKRGFKFVG STICYAFLQATGVVNDHLVNCPCYAKNNK
Sequences:
>Translated_189_residues MRKERCHWAEVSDLDREYHDNEWGVPVYSDHELFEYLILEGAQAGLSWSTILKKREGYRLLFDGFDLQKIIQYDQDKVES LMQDSRIIRNRLKINSVITNANAFIKIQQEFGSFSNYLWSYVDQKPIINHWEVINDVPATTELSDKLSKDLKKRGFKFVG STICYAFLQATGVVNDHLVNCPCYAKNNK >Mature_189_residues MRKERCHWAEVSDLDREYHDNEWGVPVYSDHELFEYLILEGAQAGLSWSTILKKREGYRLLFDGFDLQKIIQYDQDKVES LMQDSRIIRNRLKINSVITNANAFIKIQQEFGSFSNYLWSYVDQKPIINHWEVINDVPATTELSDKLSKDLKKRGFKFVG STICYAFLQATGVVNDHLVNCPCYAKNNK
Specific function: Catalyzes the synthesis of GMP from XMP [H]
COG id: COG2818
COG function: function code L; 3-methyladenine DNA glycosylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 3 N-acetyltransferase domains [H]
Homologues:
Organism=Escherichia coli, GI1789971, Length=184, Percent_Identity=50.5434782608696, Blast_Score=205, Evalue=1e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR005019 - InterPro: IPR001962 - InterPro: IPR001317 - InterPro: IPR011257 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR001674 - InterPro: IPR014729 [H]
Pfam domain/function: PF00583 Acetyltransf_1; PF03352 Adenine_glyco; PF00733 Asn_synthase; PF00117 GATase; PF00958 GMP_synt_C [H]
EC number: =6.3.5.2 [H]
Molecular weight: Translated: 22092; Mature: 22092
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKERCHWAEVSDLDREYHDNEWGVPVYSDHELFEYLILEGAQAGLSWSTILKKREGYRL CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCEE LFDGFDLQKIIQYDQDKVESLMQDSRIIRNRLKINSVITNANAFIKIQQEFGSFSNYLWS EECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHCHHHHHHHH YVDQKPIINHWEVINDVPATTELSDKLSKDLKKRGFKFVGSTICYAFLQATGVVNDHLVN HHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEC CPCYAKNNK CCCCCCCCC >Mature Secondary Structure MRKERCHWAEVSDLDREYHDNEWGVPVYSDHELFEYLILEGAQAGLSWSTILKKREGYRL CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCEE LFDGFDLQKIIQYDQDKVESLMQDSRIIRNRLKINSVITNANAFIKIQQEFGSFSNYLWS EECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHCHHHHHHHH YVDQKPIINHWEVINDVPATTELSDKLSKDLKKRGFKFVGSTICYAFLQATGVVNDHLVN HHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEC CPCYAKNNK CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12810954 [H]