| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is malP [H]
Identifier: 59713993
GI number: 59713993
Start: 912778
End: 915231
Strand: Reverse
Name: malP [H]
Synonym: VF_A0810
Alternate gene names: 59713993
Gene position: 915231-912778 (Counterclockwise)
Preceding gene: 59713996
Following gene: 172087815
Centisome position: 68.8
GC content: 39.85
Gene sequence:
>2454_bases ATGAAAACGAATAACATAGAAAAATTTGATAAAGCGGCGTTTAAAGCCTCTGTAAAGCAGCATTTAGTGACAACATTCGC TGCAGATGAAAAAACAGCGAGCGCTAAAGTATGGTATTTAGCAATGGGTAAAGCTCTAGCTGAATTAACGACATTTGATC TTGTTGCTACAGAAAATGACGAAAAAATAAAAAACGCACGCAGCGTAAACTATCTATCTTTAGAGTTTTTAATTGGACGT CTAACGGGCAACAACCTAATTAGTATGGGTCTTTATGAAGAGATCACTGAAGCAATGGGTGAGCTTGGTTATAATTTAAC GGATTTATTAGAAGAAGAGCGTGATCCTGCTTTAGGTAACGGTGGTCTCGGTCGTTTAGCTGCGTGTTTTATGGATTCAT TAGCTGCTCAAGAATATCCAGCGATTGGTTACGGTTTGCATTACGAATACGGTTTGTTCCGCCAATCTTTTGAAGACGGA CGACAAAAAGAAGCGCCTGATGCATGGTGTGGAGTAGAAGGCTATCCTTGGGAAGTGGCTCGTCCTGATTTTGCACAGCA AGTTGGATTTTATGGTCATGTAGAAACGTACACTGAAAAAGGCCAAGAGAAACGTCGCTGGGTACCAGGTATGTCAGTTG AAGGTATGCCTTGGGATTTACCTATTGTTGGTTACCAAAGTGATACGGTTTACCCATTACGTTTGTGGGAATGTCGTGCA AAAGCACCGTTTAGCCTTGCAAGCTTTAATAATGGTGACTACTTTGAAGCGCAACACGCCTTAATTGATGCTGGTAACGT AACGAAAGTTCTGTATCCAAATGATAACCACGAGAAAGGCAAAACATTACGTTTGATGCAACAGTATTTCCACTGTGCGT GTTCTATTGCTGATATCTTACGTCGTCATGATGCTGCGGGTCATAAGATTGAAGATCTTTCTAAATATGAAACGATCCAA TTAAACGATACACACCCAACAATCGGTATTCCTGAGTTAATGCGCGTACTTATTGATGTACGTGGTTTATCGTGGGATAC GGCATGGGAAATCTGTTCAAACACGTTTGCTTATACTAACCACACATTGTTACCTGAAGCGTTAGAGACATGGAGTGAAT CACTGATTTCTCGACTTTTACCTCGTCATATGGAAATCATTTATCAGATTAACTACCTATTCTTAGAAGGCGTGAAACTG AAGTGGCCAGGTGATGTTGATAAATTACGCAAGTTATCAATCATCGAAGAAGGCACACATCGTATGGTGCGCATGGCGAA TTTATGTGTGGTTTCATCTTATGCCGTGAATGGTGTGGCAGCACTTCACTCTGAGTTAGTTAAGCGTGATTTATTCCCAG AGTTTAATGAATATTTCCCAGGAAAACTAACGAATGTAACTAACGGTGTTACTCCTCGTCGTTGGCTGAAATTCTGTAAC CCTGGTCTTTCAAACCTTATTTCTGGAAAAATTGGGAATGAGTGGCCTGCACATCTTGATCAACTGAGTGACATTGCTGT TTTTGCCGATGATGAGAAATTCCAAAAAGAATTCATGGCTGTGAAAAAACAAAATAAACAGCGTTTAGCTAATTGGGTTC AAGAAAACATGGGTATTGAATTAAATACTGATGCCATCTTTGATGTTCAAATTAAGCGTTTACATGAATACAAACGTCAG CATTTGGATTTATTAAATATTCTTTCTTTATACCATCGTATATTGAACGAACCTGGTTTTGATATGCACCCACGTGTGTT TTTCTTTGCAGCAAAAGCAGCGCCGGGTTACCACTTAGCAAAAGAGATCATCTTTGCCATCAATAAAGTGGCAGAAAAAG TAAATAACGATCCTCGTGTGTCTGATTTACTGAAAGTTGTATTTATTCCTGATTACCGTGTGAGCATGGCTGAAATTATC ATTCCAGCAGCGGATGTATCTGAGCAAATTTCAACAGCGGGTAAAGAAGCATCTGGTACAGGTAACATGAAAATGGCACT AAACGGTGCGCTGACTGTTGGTACGATGGATGGTGCAAACGTTGAGATCCGCGAAGAAGTAGGTGACGAAAATATCTTCA TCTTTGGTTTAGAGGTTGATGAAGTTGAGGCGTTAAAAGCATCAGGATATAGCCCGTATAAGTACTATGAAGCCGATTCA TTATTACAAGCATCATTAGATTTATTAGCTGGTGATGAATTTACTCCGGGTAAAGTGGGTCTGTTATCTGCAATTCGTGA CAACCTATTGTATGGCGGTGACCCATATTTAGTTCTTGCTGATTTTGCTGATTATGTTCGTGCTCAGAACGACATTGATG CAGCATATCGTGACCAAAAACAGTGGGCGAAAATGGCTATTTTAAACACTGCTTTGGTTGGTAAATTTAGTTCAGACCGC AGTATCCGTGATTATGTAAATAACATTTGGAAACTGGAATCAGTAAACCGTTAA
Upstream 100 bases:
>100_bases TCTCACCCTTATCTCATCCCCCAAAAAGGAGGATGTGACTCTTATTCGAACAAGGCAGGATTGATAACAGTTGATTATGA ACCTTCGTGAGAGATTTAAG
Downstream 100 bases:
>100_bases TTAATAAAATTATAATATGAGGGCAGTATTGTACTGCCCTTGGAGAAAAGCGATGAAAGATAATAACAATGTACTCCATC AAGTCGCAGAACTGGCAGGG
Product: maltodextrin phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 817; Mature: 817
Protein sequence:
>817_residues MKTNNIEKFDKAAFKASVKQHLVTTFAADEKTASAKVWYLAMGKALAELTTFDLVATENDEKIKNARSVNYLSLEFLIGR LTGNNLISMGLYEEITEAMGELGYNLTDLLEEERDPALGNGGLGRLAACFMDSLAAQEYPAIGYGLHYEYGLFRQSFEDG RQKEAPDAWCGVEGYPWEVARPDFAQQVGFYGHVETYTEKGQEKRRWVPGMSVEGMPWDLPIVGYQSDTVYPLRLWECRA KAPFSLASFNNGDYFEAQHALIDAGNVTKVLYPNDNHEKGKTLRLMQQYFHCACSIADILRRHDAAGHKIEDLSKYETIQ LNDTHPTIGIPELMRVLIDVRGLSWDTAWEICSNTFAYTNHTLLPEALETWSESLISRLLPRHMEIIYQINYLFLEGVKL KWPGDVDKLRKLSIIEEGTHRMVRMANLCVVSSYAVNGVAALHSELVKRDLFPEFNEYFPGKLTNVTNGVTPRRWLKFCN PGLSNLISGKIGNEWPAHLDQLSDIAVFADDEKFQKEFMAVKKQNKQRLANWVQENMGIELNTDAIFDVQIKRLHEYKRQ HLDLLNILSLYHRILNEPGFDMHPRVFFFAAKAAPGYHLAKEIIFAINKVAEKVNNDPRVSDLLKVVFIPDYRVSMAEII IPAADVSEQISTAGKEASGTGNMKMALNGALTVGTMDGANVEIREEVGDENIFIFGLEVDEVEALKASGYSPYKYYEADS LLQASLDLLAGDEFTPGKVGLLSAIRDNLLYGGDPYLVLADFADYVRAQNDIDAAYRDQKQWAKMAILNTALVGKFSSDR SIRDYVNNIWKLESVNR
Sequences:
>Translated_817_residues MKTNNIEKFDKAAFKASVKQHLVTTFAADEKTASAKVWYLAMGKALAELTTFDLVATENDEKIKNARSVNYLSLEFLIGR LTGNNLISMGLYEEITEAMGELGYNLTDLLEEERDPALGNGGLGRLAACFMDSLAAQEYPAIGYGLHYEYGLFRQSFEDG RQKEAPDAWCGVEGYPWEVARPDFAQQVGFYGHVETYTEKGQEKRRWVPGMSVEGMPWDLPIVGYQSDTVYPLRLWECRA KAPFSLASFNNGDYFEAQHALIDAGNVTKVLYPNDNHEKGKTLRLMQQYFHCACSIADILRRHDAAGHKIEDLSKYETIQ LNDTHPTIGIPELMRVLIDVRGLSWDTAWEICSNTFAYTNHTLLPEALETWSESLISRLLPRHMEIIYQINYLFLEGVKL KWPGDVDKLRKLSIIEEGTHRMVRMANLCVVSSYAVNGVAALHSELVKRDLFPEFNEYFPGKLTNVTNGVTPRRWLKFCN PGLSNLISGKIGNEWPAHLDQLSDIAVFADDEKFQKEFMAVKKQNKQRLANWVQENMGIELNTDAIFDVQIKRLHEYKRQ HLDLLNILSLYHRILNEPGFDMHPRVFFFAAKAAPGYHLAKEIIFAINKVAEKVNNDPRVSDLLKVVFIPDYRVSMAEII IPAADVSEQISTAGKEASGTGNMKMALNGALTVGTMDGANVEIREEVGDENIFIFGLEVDEVEALKASGYSPYKYYEADS LLQASLDLLAGDEFTPGKVGLLSAIRDNLLYGGDPYLVLADFADYVRAQNDIDAAYRDQKQWAKMAILNTALVGKFSSDR SIRDYVNNIWKLESVNR >Mature_817_residues MKTNNIEKFDKAAFKASVKQHLVTTFAADEKTASAKVWYLAMGKALAELTTFDLVATENDEKIKNARSVNYLSLEFLIGR LTGNNLISMGLYEEITEAMGELGYNLTDLLEEERDPALGNGGLGRLAACFMDSLAAQEYPAIGYGLHYEYGLFRQSFEDG RQKEAPDAWCGVEGYPWEVARPDFAQQVGFYGHVETYTEKGQEKRRWVPGMSVEGMPWDLPIVGYQSDTVYPLRLWECRA KAPFSLASFNNGDYFEAQHALIDAGNVTKVLYPNDNHEKGKTLRLMQQYFHCACSIADILRRHDAAGHKIEDLSKYETIQ LNDTHPTIGIPELMRVLIDVRGLSWDTAWEICSNTFAYTNHTLLPEALETWSESLISRLLPRHMEIIYQINYLFLEGVKL KWPGDVDKLRKLSIIEEGTHRMVRMANLCVVSSYAVNGVAALHSELVKRDLFPEFNEYFPGKLTNVTNGVTPRRWLKFCN PGLSNLISGKIGNEWPAHLDQLSDIAVFADDEKFQKEFMAVKKQNKQRLANWVQENMGIELNTDAIFDVQIKRLHEYKRQ HLDLLNILSLYHRILNEPGFDMHPRVFFFAAKAAPGYHLAKEIIFAINKVAEKVNNDPRVSDLLKVVFIPDYRVSMAEII IPAADVSEQISTAGKEASGTGNMKMALNGALTVGTMDGANVEIREEVGDENIFIFGLEVDEVEALKASGYSPYKYYEADS LLQASLDLLAGDEFTPGKVGLLSAIRDNLLYGGDPYLVLADFADYVRAQNDIDAAYRDQKQWAKMAILNTALVGKFSSDR SIRDYVNNIWKLESVNR
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI71037379, Length=810, Percent_Identity=46.5432098765432, Blast_Score=714, Evalue=0.0, Organism=Homo sapiens, GI5032009, Length=808, Percent_Identity=45.1732673267327, Blast_Score=713, Evalue=0.0, Organism=Homo sapiens, GI21361370, Length=812, Percent_Identity=46.1822660098522, Blast_Score=701, Evalue=0.0, Organism=Homo sapiens, GI255653002, Length=695, Percent_Identity=48.2014388489209, Blast_Score=677, Evalue=0.0, Organism=Homo sapiens, GI257900462, Length=729, Percent_Identity=44.8559670781893, Blast_Score=642, Evalue=0.0, Organism=Escherichia coli, GI48994936, Length=779, Percent_Identity=57.7663671373556, Blast_Score=905, Evalue=0.0, Organism=Escherichia coli, GI2367228, Length=803, Percent_Identity=45.5790784557908, Blast_Score=705, Evalue=0.0, Organism=Caenorhabditis elegans, GI17564550, Length=810, Percent_Identity=47.7777777777778, Blast_Score=761, Evalue=0.0, Organism=Caenorhabditis elegans, GI32566204, Length=811, Percent_Identity=47.7188655980271, Blast_Score=759, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325418, Length=852, Percent_Identity=43.6619718309859, Blast_Score=645, Evalue=0.0, Organism=Drosophila melanogaster, GI78706832, Length=807, Percent_Identity=47.8314745972739, Blast_Score=754, Evalue=0.0, Organism=Drosophila melanogaster, GI24581010, Length=807, Percent_Identity=47.8314745972739, Blast_Score=754, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011833 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 92226; Mature: 92226
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTNNIEKFDKAAFKASVKQHLVTTFAADEKTASAKVWYLAMGKALAELTTFDLVATEND CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHEEEECCCH EKIKNARSVNYLSLEFLIGRLTGNNLISMGLYEEITEAMGELGYNLTDLLEEERDPALGN HHHHHHCCCCEEEHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC GGLGRLAACFMDSLAAQEYPAIGYGLHYEYGLFRQSFEDGRQKEAPDAWCGVEGYPWEVA CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC RPDFAQQVGFYGHVETYTEKGQEKRRWVPGMSVEGMPWDLPIVGYQSDTVYPLRLWECRA CCCHHHHCCCCCCHHHHHHCCHHHHHCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCC KAPFSLASFNNGDYFEAQHALIDAGNVTKVLYPNDNHEKGKTLRLMQQYFHCACSIADIL CCCEEEECCCCCCCCHHHHHEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH RRHDAAGHKIEDLSKYETIQLNDTHPTIGIPELMRVLIDVRGLSWDTAWEICSNTFAYTN HHCCCCCCCHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCC HTLLPEALETWSESLISRLLPRHMEIIYQINYLFLEGVKLKWPGDVDKLRKLSIIEEGTH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECEEEECCCCHHHHHHHHHHHHHHH RMVRMANLCVVSSYAVNGVAALHSELVKRDLFPEFNEYFPGKLTNVTNGVTPRRWLKFCN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCHHHHHHHHC PGLSNLISGKIGNEWPAHLDQLSDIAVFADDEKFQKEFMAVKKQNKQRLANWVQENMGIE CCHHHHHCCCCCCCCHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCEE LNTDAIFDVQIKRLHEYKRQHLDLLNILSLYHRILNEPGFDMHPRVFFFAAKAAPGYHLA ECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHH KEIIFAINKVAEKVNNDPRVSDLLKVVFIPDYRVSMAEIIIPAADVSEQISTAGKEASGT HHHHHHHHHHHHHCCCCCCHHHHHHHEECCCCHHHHHHHEECCHHHHHHHHHCCCCCCCC GNMKMALNGALTVGTMDGANVEIREEVGDENIFIFGLEVDEVEALKASGYSPYKYYEADS CCEEEEEECEEEEEECCCCCEEEHHHCCCCCEEEEEEEHHHHHHHHHCCCCCCEECCHHH LLQASLDLLAGDEFTPGKVGLLSAIRDNLLYGGDPYLVLADFADYVRAQNDIDAAYRDQK HHHHHHHHHCCCCCCCCHHHHHHHHHHCCEECCCCCEEHHHHHHHHHCCCCHHHHHHHHH QWAKMAILNTALVGKFSSDRSIRDYVNNIWKLESVNR HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKTNNIEKFDKAAFKASVKQHLVTTFAADEKTASAKVWYLAMGKALAELTTFDLVATEND CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHEEEECCCH EKIKNARSVNYLSLEFLIGRLTGNNLISMGLYEEITEAMGELGYNLTDLLEEERDPALGN HHHHHHCCCCEEEHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC GGLGRLAACFMDSLAAQEYPAIGYGLHYEYGLFRQSFEDGRQKEAPDAWCGVEGYPWEVA CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC RPDFAQQVGFYGHVETYTEKGQEKRRWVPGMSVEGMPWDLPIVGYQSDTVYPLRLWECRA CCCHHHHCCCCCCHHHHHHCCHHHHHCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCC KAPFSLASFNNGDYFEAQHALIDAGNVTKVLYPNDNHEKGKTLRLMQQYFHCACSIADIL CCCEEEECCCCCCCCHHHHHEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH RRHDAAGHKIEDLSKYETIQLNDTHPTIGIPELMRVLIDVRGLSWDTAWEICSNTFAYTN HHCCCCCCCHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCC HTLLPEALETWSESLISRLLPRHMEIIYQINYLFLEGVKLKWPGDVDKLRKLSIIEEGTH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECEEEECCCCHHHHHHHHHHHHHHH RMVRMANLCVVSSYAVNGVAALHSELVKRDLFPEFNEYFPGKLTNVTNGVTPRRWLKFCN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCHHHHHHHHC PGLSNLISGKIGNEWPAHLDQLSDIAVFADDEKFQKEFMAVKKQNKQRLANWVQENMGIE CCHHHHHCCCCCCCCHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCEE LNTDAIFDVQIKRLHEYKRQHLDLLNILSLYHRILNEPGFDMHPRVFFFAAKAAPGYHLA ECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHH KEIIFAINKVAEKVNNDPRVSDLLKVVFIPDYRVSMAEIIIPAADVSEQISTAGKEASGT HHHHHHHHHHHHHCCCCCCHHHHHHHEECCCCHHHHHHHEECCHHHHHHHHHCCCCCCCC GNMKMALNGALTVGTMDGANVEIREEVGDENIFIFGLEVDEVEALKASGYSPYKYYEADS CCEEEEEECEEEEEECCCCCEEEHHHCCCCCEEEEEEEHHHHHHHHHCCCCCCEECCHHH LLQASLDLLAGDEFTPGKVGLLSAIRDNLLYGGDPYLVLADFADYVRAQNDIDAAYRDQK HHHHHHHHHCCCCCCCCHHHHHHHHHHCCEECCCCCEEHHHHHHHHHCCCCHHHHHHHHH QWAKMAILNTALVGKFSSDRSIRDYVNNIWKLESVNR HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3037809; 9278503; 3155826; 2845225; 6283313; 6339728; 6986282; 9009262; 10220320; 10469642 [H]