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The map label for this gene is 59713958

Identifier: 59713958

GI number: 59713958

Start: 868966

End: 870138

Strand: Reverse

Name: 59713958

Synonym: VF_A0775

Alternate gene names: NA

Gene position: 870138-868966 (Counterclockwise)

Preceding gene: 59713959

Following gene: 59713956

Centisome position: 65.41

GC content: 36.4

Gene sequence:

>1173_bases
ATGATGAAGAAATTAGTACTAATGAGCATGTTAGTTGCGTGGGCTGTGAATGTACATTCGGCTGAATTAAGTAAATATAC
AGCCAATAAAGTGCAAAGGGCACAAAGCTTACAACAGCAAGAAAAGTTAAATGAAGCAATAGAAGTGCTTGGTGGTGTCA
ATACATCGAAAGCTTATGATAAAGCGTTTGTTGCGCGTATGCTTGGCGTTTTTTATTGGGAAAATAACCAAAAATCGTTA
GCGATAAAAAATTTAGATTACGCAGTGTCCAGTGGAGAACTAAAAGATACTCAAGCATGGGTAACGGAGAGAATGCTTGC
TGATCTTTTATTAATGGATCAACAATATAAAAAAGCACTCCCTCATTACTATCAGTTAGTTAAATCTATACCTAAGAATG
AAAAAGGAAATGAACTCTGGCTTAGAATAGCTCAAATTCATTATCAGCTCTCGGAATTTAGCTCTACACTAAAAGCGATT
CAGCGATATGAATCTTATCGCCAACCAGATTCGTTAACGCCTTTATCACTAAAATTTGGCTCTCAAGTGCAATTAAAACA
ATGGAAATCTGTGATCCCAACTTTAGAGCGACTCATTGTACTTGAACCAGAAAAATTGATATGGTGGCGTCAACTTGTGA
CTGCACATTTACAGTTACATCAAACAAAACAAGCATTAAGTGTTTTGGTATTAGCAGATAGAAAAGGCTTCCCCTTGCCT
GAGCAAGATATTATGTTATTAGCTCAGCTATATGCAAAGCAAGGTATTCCAGAGCAAGCTGCTATTACGTTGAAGCGTTT
ATCAAAAGCAAATACAGATGTTGATTTATTGGTTGAACAAGCTGTGTATTGGCAACAAGCAAAAGAATGGCAGCAATCAA
TCTTTTATTGGGGGAAAGCGGCTAAAGTTTCTCCACGATATTATTGGCAAGAAGCTCAGTTATTGCTTCAACAAAAAGAG
TACCAATTGGCTTTGGCTTCATTAGCTAAAGTGAGGGACCCTAAGAAAAAACAAGCGGTTTTACTTGCACAAGCAAAAGC
ATACTATAAGTTGAATCGTATCGAAGAAAGCTTAATTAAGGCGAAAAAAGCCAATGATATTACCAGTACAAATGAAACAA
AAGGCTGGATTAATTATCTATCCAATCTAAGAAAAGTGAGTGAAGATTCTTAG

Upstream 100 bases:

>100_bases
TGCGTGCGTTAAAACAGTGGAAATATCAGCCTAAGTTGGTCGAAGGAAAAGCGATTATTCAGCAAAACCAAACCGTAAGA
TTGGAGTTTAAATTAGCCGA

Downstream 100 bases:

>100_bases
TATGCTAAATTAAGTTTAAGTCAGGAAAGTGCTAATACACTTTCCTGATTAATTTATTTAAACCATTAATTTTTTAAATT
CTTCAATTGGAGCTCTTCCT

Product: short chain dehydrogenase

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; Tetratricopeptide Domain-Containing Protein; TPR Domain Protein; TPR Domain Protein Component Of nB System; TPR Repeat Protein; Tetratricopeptide Region; Tetratricopeptide Repeat Domain Protein; Short Chain Dehydrogenase

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MMKKLVLMSMLVAWAVNVHSAELSKYTANKVQRAQSLQQQEKLNEAIEVLGGVNTSKAYDKAFVARMLGVFYWENNQKSL
AIKNLDYAVSSGELKDTQAWVTERMLADLLLMDQQYKKALPHYYQLVKSIPKNEKGNELWLRIAQIHYQLSEFSSTLKAI
QRYESYRQPDSLTPLSLKFGSQVQLKQWKSVIPTLERLIVLEPEKLIWWRQLVTAHLQLHQTKQALSVLVLADRKGFPLP
EQDIMLLAQLYAKQGIPEQAAITLKRLSKANTDVDLLVEQAVYWQQAKEWQQSIFYWGKAAKVSPRYYWQEAQLLLQQKE
YQLALASLAKVRDPKKKQAVLLAQAKAYYKLNRIEESLIKAKKANDITSTNETKGWINYLSNLRKVSEDS

Sequences:

>Translated_390_residues
MMKKLVLMSMLVAWAVNVHSAELSKYTANKVQRAQSLQQQEKLNEAIEVLGGVNTSKAYDKAFVARMLGVFYWENNQKSL
AIKNLDYAVSSGELKDTQAWVTERMLADLLLMDQQYKKALPHYYQLVKSIPKNEKGNELWLRIAQIHYQLSEFSSTLKAI
QRYESYRQPDSLTPLSLKFGSQVQLKQWKSVIPTLERLIVLEPEKLIWWRQLVTAHLQLHQTKQALSVLVLADRKGFPLP
EQDIMLLAQLYAKQGIPEQAAITLKRLSKANTDVDLLVEQAVYWQQAKEWQQSIFYWGKAAKVSPRYYWQEAQLLLQQKE
YQLALASLAKVRDPKKKQAVLLAQAKAYYKLNRIEESLIKAKKANDITSTNETKGWINYLSNLRKVSEDS
>Mature_390_residues
MMKKLVLMSMLVAWAVNVHSAELSKYTANKVQRAQSLQQQEKLNEAIEVLGGVNTSKAYDKAFVARMLGVFYWENNQKSL
AIKNLDYAVSSGELKDTQAWVTERMLADLLLMDQQYKKALPHYYQLVKSIPKNEKGNELWLRIAQIHYQLSEFSSTLKAI
QRYESYRQPDSLTPLSLKFGSQVQLKQWKSVIPTLERLIVLEPEKLIWWRQLVTAHLQLHQTKQALSVLVLADRKGFPLP
EQDIMLLAQLYAKQGIPEQAAITLKRLSKANTDVDLLVEQAVYWQQAKEWQQSIFYWGKAAKVSPRYYWQEAQLLLQQKE
YQLALASLAKVRDPKKKQAVLLAQAKAYYKLNRIEESLIKAKKANDITSTNETKGWINYLSNLRKVSEDS

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45065; Mature: 45065

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKLVLMSMLVAWAVNVHSAELSKYTANKVQRAQSLQQQEKLNEAIEVLGGVNTSKAYD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
KAFVARMLGVFYWENNQKSLAIKNLDYAVSSGELKDTQAWVTERMLADLLLMDQQYKKAL
HHHHHHHHHHHHEECCCCEEEEECCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
PHYYQLVKSIPKNEKGNELWLRIAQIHYQLSEFSSTLKAIQRYESYRQPDSLTPLSLKFG
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCC
SQVQLKQWKSVIPTLERLIVLEPEKLIWWRQLVTAHLQLHQTKQALSVLVLADRKGFPLP
CCHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC
EQDIMLLAQLYAKQGIPEQAAITLKRLSKANTDVDLLVEQAVYWQQAKEWQQSIFYWGKA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
AKVSPRYYWQEAQLLLQQKEYQLALASLAKVRDPKKKQAVLLAQAKAYYKLNRIEESLIK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AKKANDITSTNETKGWINYLSNLRKVSEDS
HHHCCCCCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMKKLVLMSMLVAWAVNVHSAELSKYTANKVQRAQSLQQQEKLNEAIEVLGGVNTSKAYD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
KAFVARMLGVFYWENNQKSLAIKNLDYAVSSGELKDTQAWVTERMLADLLLMDQQYKKAL
HHHHHHHHHHHHEECCCCEEEEECCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
PHYYQLVKSIPKNEKGNELWLRIAQIHYQLSEFSSTLKAIQRYESYRQPDSLTPLSLKFG
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCC
SQVQLKQWKSVIPTLERLIVLEPEKLIWWRQLVTAHLQLHQTKQALSVLVLADRKGFPLP
CCHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC
EQDIMLLAQLYAKQGIPEQAAITLKRLSKANTDVDLLVEQAVYWQQAKEWQQSIFYWGKA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
AKVSPRYYWQEAQLLLQQKEYQLALASLAKVRDPKKKQAVLLAQAKAYYKLNRIEESLIK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AKKANDITSTNETKGWINYLSNLRKVSEDS
HHHCCCCCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA