Definition Vibrio fischeri ES114 chromosome chromosome II, complete sequence.
Accession NC_006841
Length 1,330,333

Click here to switch to the map view.

The map label for this gene is 59713838

Identifier: 59713838

GI number: 59713838

Start: 727937

End: 728824

Strand: Reverse

Name: 59713838

Synonym: VF_A0655

Alternate gene names: NA

Gene position: 728824-727937 (Counterclockwise)

Preceding gene: 59713839

Following gene: 59713837

Centisome position: 54.79

GC content: 32.32

Gene sequence:

>888_bases
ATGAATGGAATATGGAGAGTCGTTTTCTCTTGTACTTTAACTGCAATTTTTACTGCGGTGATTGGTTATTTACTATATTT
GGAGCAAGTTAAAGTTCCAAAATTAGATATCCATAAGAAATTTGAAAGTAATTATTTCTCAAAGCCTAAGTTTCCTGATG
ATGAAATAAGACTAATCGTTAATAATGCAGAAAAAGAAAAGATTGGCATCATGTATGTATCGTTGGTTAACTTTTCGACT
AAAGATTTACTTGACCTGCCAGTGACTATAATTATAGAGCCAGAAAATGTAAAAGAATTTAAGGTATTAGCACATGCGGT
AGTAGGTGAGCACGAAACGACAGACTCTGTTATACAAACAAAGAAAATGGTATTTGATGGTAACAAATACTATTTCAATT
TTATTGCTCAAGCAATTAATCGAGTTGATGGACCTGAACCGGGATTACAATTGCGGCTTCTTTTTGAAGGAACAGAAGAA
CCCAAAGTAAAAGTGTCTGCAATTGGTATTGATACTAGAGAATATGACATAGATAATAGTCCTTCAAGTAGTCGAGATTC
AATTAAAACTACTTCTTGGTTAGTGTTGTTTATGCTTAGTTTTGTTCTTATTGTAGTTGTGGTTACAGGTATGTTTATTA
TGCCTGCGGTTTCTCTTTTTTCTCATAAATCTGATGTTAAGTTTCGTAAAAAAAGAGCGACAGCATTATTTCATGTTATT
AAAGAAAATAATCTTAACCCTGAGCTTGATGACGAAAAATTAAGTAATTATGTTACTGAACTTCTTTATCAAGAAAGACT
GCGAAATTGGAATGGATTATCAGTAATATTAAAATGGACATCAGCAATGATCCCTCCTAACAAAGAAGACCATAGACCAG
CAATATAA

Upstream 100 bases:

>100_bases
ATTCGCGGTTTGGAGTATAATTGGTTTTGTAAGTCAGTCTTTCGCACGTGTTATTGTGGCGTTATATTGCTCTTGAGATT
ATAGAAGGAGTTTAAAATCG

Downstream 100 bases:

>100_bases
CAAATGCATCAACACGATTTGCTACACTCGGCGTTGTCAGTTTGCCTTTAGTTTCAGTGATTAAGGCAGTAAAATTCAGG
TAAGTCTGTATCGTAGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MNGIWRVVFSCTLTAIFTAVIGYLLYLEQVKVPKLDIHKKFESNYFSKPKFPDDEIRLIVNNAEKEKIGIMYVSLVNFST
KDLLDLPVTIIIEPENVKEFKVLAHAVVGEHETTDSVIQTKKMVFDGNKYYFNFIAQAINRVDGPEPGLQLRLLFEGTEE
PKVKVSAIGIDTREYDIDNSPSSSRDSIKTTSWLVLFMLSFVLIVVVVTGMFIMPAVSLFSHKSDVKFRKKRATALFHVI
KENNLNPELDDEKLSNYVTELLYQERLRNWNGLSVILKWTSAMIPPNKEDHRPAI

Sequences:

>Translated_295_residues
MNGIWRVVFSCTLTAIFTAVIGYLLYLEQVKVPKLDIHKKFESNYFSKPKFPDDEIRLIVNNAEKEKIGIMYVSLVNFST
KDLLDLPVTIIIEPENVKEFKVLAHAVVGEHETTDSVIQTKKMVFDGNKYYFNFIAQAINRVDGPEPGLQLRLLFEGTEE
PKVKVSAIGIDTREYDIDNSPSSSRDSIKTTSWLVLFMLSFVLIVVVVTGMFIMPAVSLFSHKSDVKFRKKRATALFHVI
KENNLNPELDDEKLSNYVTELLYQERLRNWNGLSVILKWTSAMIPPNKEDHRPAI
>Mature_295_residues
MNGIWRVVFSCTLTAIFTAVIGYLLYLEQVKVPKLDIHKKFESNYFSKPKFPDDEIRLIVNNAEKEKIGIMYVSLVNFST
KDLLDLPVTIIIEPENVKEFKVLAHAVVGEHETTDSVIQTKKMVFDGNKYYFNFIAQAINRVDGPEPGLQLRLLFEGTEE
PKVKVSAIGIDTREYDIDNSPSSSRDSIKTTSWLVLFMLSFVLIVVVVTGMFIMPAVSLFSHKSDVKFRKKRATALFHVI
KENNLNPELDDEKLSNYVTELLYQERLRNWNGLSVILKWTSAMIPPNKEDHRPAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33777; Mature: 33777

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGIWRVVFSCTLTAIFTAVIGYLLYLEQVKVPKLDIHKKFESNYFSKPKFPDDEIRLIV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHEEEEE
NNAEKEKIGIMYVSLVNFSTKDLLDLPVTIIIEPENVKEFKVLAHAVVGEHETTDSVIQT
ECCCCCHHEEEEEEEECCCCHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHH
KKMVFDGNKYYFNFIAQAINRVDGPEPGLQLRLLFEGTEEPKVKVSAIGIDTREYDIDNS
HHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCC
PSSSRDSIKTTSWLVLFMLSFVLIVVVVTGMFIMPAVSLFSHKSDVKFRKKRATALFHVI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
KENNLNPELDDEKLSNYVTELLYQERLRNWNGLSVILKWTSAMIPPNKEDHRPAI
HHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNGIWRVVFSCTLTAIFTAVIGYLLYLEQVKVPKLDIHKKFESNYFSKPKFPDDEIRLIV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHEEEEE
NNAEKEKIGIMYVSLVNFSTKDLLDLPVTIIIEPENVKEFKVLAHAVVGEHETTDSVIQT
ECCCCCHHEEEEEEEECCCCHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHH
KKMVFDGNKYYFNFIAQAINRVDGPEPGLQLRLLFEGTEEPKVKVSAIGIDTREYDIDNS
HHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCC
PSSSRDSIKTTSWLVLFMLSFVLIVVVVTGMFIMPAVSLFSHKSDVKFRKKRATALFHVI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
KENNLNPELDDEKLSNYVTELLYQERLRNWNGLSVILKWTSAMIPPNKEDHRPAI
HHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA