| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is 59713831
Identifier: 59713831
GI number: 59713831
Start: 722406
End: 722771
Strand: Reverse
Name: 59713831
Synonym: VF_A0648
Alternate gene names: NA
Gene position: 722771-722406 (Counterclockwise)
Preceding gene: 59713832
Following gene: 59713830
Centisome position: 54.33
GC content: 32.79
Gene sequence:
>366_bases ATGGCTAGAAAAGATAAAAGAATACTTTTGCTCGACTTTTTTCGAGAACAAGAAGATAAAGCGCAAAGCTTTACATATCA AGATGCGGCAATAGCAACAGGTTACAACCCTAAAAGTGTTGGGAAATATATAAGTGAGAAATTAAAAGGTTCCTATATTT TTAAATCTGAACATGGAGGATGGGTATCAGAAGGACTTTCTAAAGTTTCTAATGATGAATTTATTCGCTTAATGTCACAA AGTACTTCTGCGCGTAAATTATCGCCAAATGAGAAAATGTATCAGAAGTTGATAAAAAGAAGTTTAGATGCATTTACATT AGCTTTAGAAATGTATAACCGACCTAGTCTATGTTATAGGGTTTAG
Upstream 100 bases:
>100_bases GTCTTGGGTTTCGTGATTAAGGCGCTAAAATTCAGGTTGGTTGGCATGGTAATAAACGTGTTATGCAAGCGTTAACAAGC AATAGTAGGGTATATTGATT
Downstream 100 bases:
>100_bases GCATTTACTATTATGATGGTAAACGCTTGGGAGTTATTTTTGAAAGCTGAGATTTTGGAAGCTTTAGGTGAGGAGAAAGT ATTTTATAAAAATGGGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MARKDKRILLLDFFREQEDKAQSFTYQDAAIATGYNPKSVGKYISEKLKGSYIFKSEHGGWVSEGLSKVSNDEFIRLMSQ STSARKLSPNEKMYQKLIKRSLDAFTLALEMYNRPSLCYRV
Sequences:
>Translated_121_residues MARKDKRILLLDFFREQEDKAQSFTYQDAAIATGYNPKSVGKYISEKLKGSYIFKSEHGGWVSEGLSKVSNDEFIRLMSQ STSARKLSPNEKMYQKLIKRSLDAFTLALEMYNRPSLCYRV >Mature_120_residues ARKDKRILLLDFFREQEDKAQSFTYQDAAIATGYNPKSVGKYISEKLKGSYIFKSEHGGWVSEGLSKVSNDEFIRLMSQS TSARKLSPNEKMYQKLIKRSLDAFTLALEMYNRPSLCYRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13990; Mature: 13859
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKDKRILLLDFFREQEDKAQSFTYQDAAIATGYNPKSVGKYISEKLKGSYIFKSEHGG CCCCCCEEEHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHCCCEEEECCCCC WVSEGLSKVSNDEFIRLMSQSTSARKLSPNEKMYQKLIKRSLDAFTLALEMYNRPSLCYR HHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEC V C >Mature Secondary Structure ARKDKRILLLDFFREQEDKAQSFTYQDAAIATGYNPKSVGKYISEKLKGSYIFKSEHGG CCCCCEEEHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHCCCEEEECCCCC WVSEGLSKVSNDEFIRLMSQSTSARKLSPNEKMYQKLIKRSLDAFTLALEMYNRPSLCYR HHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEC V C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA