| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
Click here to switch to the map view.
The map label for this gene is 59713818
Identifier: 59713818
GI number: 59713818
Start: 712222
End: 712695
Strand: Reverse
Name: 59713818
Synonym: VF_A0635
Alternate gene names: NA
Gene position: 712695-712222 (Counterclockwise)
Preceding gene: 59713819
Following gene: 59713817
Centisome position: 53.57
GC content: 32.91
Gene sequence:
>474_bases ATGAGAAATAAATTACGTATAATCTTAATTTTTACTGCACTGATAAGTGTATTATCTGGAGTCGCTCGAGCTGAAAAGCA TAAAGATTTTGGTGATTACACAACATACGTTGTAACACAAAATGACGGGGTTATTTATAAGCAAGCAAATGTTAAGTTAG ACGGTATATTTGCCGAACTTGCATTCCACTCTCGTTCAAATAGTGAAAACGTATTTGCTTTTGTTAATAAGCAAAAAGTT CAGTTAATTGTCGATGGGATTATTATGGATAATAAGCTAGATCATAATGAAGTAACAATGATAAAAAATGCTCATAACAT TGCGGTAATTCATGGCAACCGAACTTATCTTATTAGCACCAAAGGTAGTGGTGCTTCGATGATTTATATTACAGACTTTC CTATGATTGAGAGAGAGGATGCTAAGAACAAAATTCCGATTATTATTTCAAAGCCCAGAGTAAGTAATGAGTAA
Upstream 100 bases:
>100_bases TTGTTGTTTTTAGTAAATTATTACAAATTGTAGTCTGCCTAAGTTCATAATTTCAGTCTTGCTAGATTACTTCATTTTTC TCCTAAATAGGTATCAATTA
Downstream 100 bases:
>100_bases AAGAATATAGCTACAGTTCATAATAAATTAATATATATATCATCATATGACGCATATACAAAATTCAATAATGAATGGAA AAAAGTATGTAATGCTGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MRNKLRIILIFTALISVLSGVARAEKHKDFGDYTTYVVTQNDGVIYKQANVKLDGIFAELAFHSRSNSENVFAFVNKQKV QLIVDGIIMDNKLDHNEVTMIKNAHNIAVIHGNRTYLISTKGSGASMIYITDFPMIEREDAKNKIPIIISKPRVSNE
Sequences:
>Translated_157_residues MRNKLRIILIFTALISVLSGVARAEKHKDFGDYTTYVVTQNDGVIYKQANVKLDGIFAELAFHSRSNSENVFAFVNKQKV QLIVDGIIMDNKLDHNEVTMIKNAHNIAVIHGNRTYLISTKGSGASMIYITDFPMIEREDAKNKIPIIISKPRVSNE >Mature_157_residues MRNKLRIILIFTALISVLSGVARAEKHKDFGDYTTYVVTQNDGVIYKQANVKLDGIFAELAFHSRSNSENVFAFVNKQKV QLIVDGIIMDNKLDHNEVTMIKNAHNIAVIHGNRTYLISTKGSGASMIYITDFPMIEREDAKNKIPIIISKPRVSNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17681; Mature: 17681
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNKLRIILIFTALISVLSGVARAEKHKDFGDYTTYVVTQNDGVIYKQANVKLDGIFAEL CCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEECCEEEEEEEEEE AFHSRSNSENVFAFVNKQKVQLIVDGIIMDNKLDHNEVTMIKNAHNIAVIHGNRTYLIST EECCCCCCCCEEEEEECCEEEEEEEEEEECCCCCCCEEEEEECCCEEEEEECCEEEEEEE KGSGASMIYITDFPMIEREDAKNKIPIIISKPRVSNE CCCCEEEEEEECCCCEECCCCCCCCCEEEECCCCCCC >Mature Secondary Structure MRNKLRIILIFTALISVLSGVARAEKHKDFGDYTTYVVTQNDGVIYKQANVKLDGIFAEL CCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEECCEEEEEEEEEE AFHSRSNSENVFAFVNKQKVQLIVDGIIMDNKLDHNEVTMIKNAHNIAVIHGNRTYLIST EECCCCCCCCEEEEEECCEEEEEEEEEEECCCCCCCEEEEEECCCEEEEEECCEEEEEEE KGSGASMIYITDFPMIEREDAKNKIPIIISKPRVSNE CCCCEEEEEEECCCCEECCCCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA