| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
Click here to switch to the map view.
The map label for this gene is 59713804
Identifier: 59713804
GI number: 59713804
Start: 700904
End: 701434
Strand: Reverse
Name: 59713804
Synonym: VF_A0621
Alternate gene names: NA
Gene position: 701434-700904 (Counterclockwise)
Preceding gene: 59713805
Following gene: 59713802
Centisome position: 52.73
GC content: 35.03
Gene sequence:
>531_bases ATGAAAAAAATAATCATTTTAACCACTCTTTTAGGTTTGAGTTCAGCTTCTTATGCTGGATTTAATTTTGATTCTGATAA CGAGAGCCGGATATACATCTGTACTCTTCAACCGTTCCAAGACATTTTTGCAGAAGCAGGAATAACAGAGGATATTGCAC GTTATAAAGTACAACGACGCTGTGAAAAATCTCAAGGTGAAGATAGTATTTTTTGTAAGTCTCGCGAAGCGAAATGCAAC CAATCAACAATCGTACTTGGTTTAGAATCAAACACAAATAAGAGCGTGGAGATTTACAGTCACAGTAATCAAATGGGGTC ATCGATAAGTATTGAGCATAATGAACCTGATTTAAGTGATTACAACTTTGACGATAGAATGTCTTCTTATGATATCCCAT CAGGTTGGACTGTTCGTTTTTATGAAGGTAAAAACTATACTGGTGGTTTTTATACTCGTAAAAGTGGGGAAGGGAATGCG AAAGGGTTTGATAATAAAATTAGCTCTATAAAGATACTGAGCACTTTTTAA
Upstream 100 bases:
>100_bases TTCTAATATATCTTGCGTTACGATAATCTTCCCATCAGTTTTTTGGTGGCTTTTTGGGTGCTTTATGATGGCAATGTAGT TGCTGTGGTAGATAGTAATC
Downstream 100 bases:
>100_bases CAAGACAAGCCTCATTATTTACAAATAGATTTCTAGCCTTAATTAAAAGGCTAGAATGACATATTACAGCATCAATAATT TTTATCTTCTAAAATAGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MKKIIILTTLLGLSSASYAGFNFDSDNESRIYICTLQPFQDIFAEAGITEDIARYKVQRRCEKSQGEDSIFCKSREAKCN QSTIVLGLESNTNKSVEIYSHSNQMGSSISIEHNEPDLSDYNFDDRMSSYDIPSGWTVRFYEGKNYTGGFYTRKSGEGNA KGFDNKISSIKILSTF
Sequences:
>Translated_176_residues MKKIIILTTLLGLSSASYAGFNFDSDNESRIYICTLQPFQDIFAEAGITEDIARYKVQRRCEKSQGEDSIFCKSREAKCN QSTIVLGLESNTNKSVEIYSHSNQMGSSISIEHNEPDLSDYNFDDRMSSYDIPSGWTVRFYEGKNYTGGFYTRKSGEGNA KGFDNKISSIKILSTF >Mature_176_residues MKKIIILTTLLGLSSASYAGFNFDSDNESRIYICTLQPFQDIFAEAGITEDIARYKVQRRCEKSQGEDSIFCKSREAKCN QSTIVLGLESNTNKSVEIYSHSNQMGSSISIEHNEPDLSDYNFDDRMSSYDIPSGWTVRFYEGKNYTGGFYTRKSGEGNA KGFDNKISSIKILSTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19822; Mature: 19822
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIIILTTLLGLSSASYAGFNFDSDNESRIYICTLQPFQDIFAEAGITEDIARYKVQRR CCEEEEEEEEHHCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHHH CEKSQGEDSIFCKSREAKCNQSTIVLGLESNTNKSVEIYSHSNQMGSSISIEHNEPDLSD HHHCCCCCCEEEECCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCEEEEECCCCCCCC YNFDDRMSSYDIPSGWTVRFYEGKNYTGGFYTRKSGEGNAKGFDNKISSIKILSTF CCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure MKKIIILTTLLGLSSASYAGFNFDSDNESRIYICTLQPFQDIFAEAGITEDIARYKVQRR CCEEEEEEEEHHCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHHH CEKSQGEDSIFCKSREAKCNQSTIVLGLESNTNKSVEIYSHSNQMGSSISIEHNEPDLSD HHHCCCCCCEEEECCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCEEEEECCCCCCCC YNFDDRMSSYDIPSGWTVRFYEGKNYTGGFYTRKSGEGNAKGFDNKISSIKILSTF CCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA