| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is 59713793
Identifier: 59713793
GI number: 59713793
Start: 688651
End: 689202
Strand: Reverse
Name: 59713793
Synonym: VF_A0610
Alternate gene names: NA
Gene position: 689202-688651 (Counterclockwise)
Preceding gene: 59713797
Following gene: 59713792
Centisome position: 51.81
GC content: 39.31
Gene sequence:
>552_bases ATGAACTTTAAAAAGATGAAAATAGCTGTAGCAGTGGCGCTAGGCGTGACTACTTTAACTGGTTGTATGGGTCAAATGGG TGTTACTCAACTTGTTACTTTTGGTAACTTAAAAGCAGTTGATAACCGTTACGGCCGTGCTGGACTTTATATTCTACTTG CACCTGTTTATGGTATTTCAGCTGCAGCTGACTTATTTATCTTTAACTCAATCGAATTCTGGACTGGTAAAAACATCATC ACAGGTAAGAGCCCTGCGATCGTAGATAAAGATGTTGGCGGTGCTGTATTTAAAGTTAACGACAAAATCGACGCATCAAT GACAAAAGCACCAGTTGCACCTCTACAAGTTAACAACAACGTTAAGAGCACAACTGTTGAACAAATCGATGCAAACACGC TTGAAATGCACGTTGCATTACTAGATGGTACTCAACAAGTACTTCGTGGCGAAAAAGTAGATGATAGTGTTGCATTCTAC CTAGACGGTAAACACATCACTACAGTACAAATTTCAGAATTAGAAAACTACGTAGCAGCAACTCAAGCTTAA
Upstream 100 bases:
>100_bases GTCAGTTTTTTGTAAAATATTGATGTTGGGTCTGTTTTTACAAATAATTACTTGATAATATGCGGCGCGTTAACAACAAC ACTAATAAATAGAGAATATT
Downstream 100 bases:
>100_bases TCTGCGTTTTATCTAATTTTTAAAAGCATCCTAGAAATAGGGTGCTTTTTTTATGCCTCATTTCAAATATTTTATAAATA TATTCCTCTTATCAAACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MNFKKMKIAVAVALGVTTLTGCMGQMGVTQLVTFGNLKAVDNRYGRAGLYILLAPVYGISAAADLFIFNSIEFWTGKNII TGKSPAIVDKDVGGAVFKVNDKIDASMTKAPVAPLQVNNNVKSTTVEQIDANTLEMHVALLDGTQQVLRGEKVDDSVAFY LDGKHITTVQISELENYVAATQA
Sequences:
>Translated_183_residues MNFKKMKIAVAVALGVTTLTGCMGQMGVTQLVTFGNLKAVDNRYGRAGLYILLAPVYGISAAADLFIFNSIEFWTGKNII TGKSPAIVDKDVGGAVFKVNDKIDASMTKAPVAPLQVNNNVKSTTVEQIDANTLEMHVALLDGTQQVLRGEKVDDSVAFY LDGKHITTVQISELENYVAATQA >Mature_183_residues MNFKKMKIAVAVALGVTTLTGCMGQMGVTQLVTFGNLKAVDNRYGRAGLYILLAPVYGISAAADLFIFNSIEFWTGKNII TGKSPAIVDKDVGGAVFKVNDKIDASMTKAPVAPLQVNNNVKSTTVEQIDANTLEMHVALLDGTQQVLRGEKVDDSVAFY LDGKHITTVQISELENYVAATQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19600; Mature: 19600
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFKKMKIAVAVALGVTTLTGCMGQMGVTQLVTFGNLKAVDNRYGRAGLYILLAPVYGIS CCCHHEEEEEHHHHHHHHHHHHHHCCCHHHHHHCCCEEECCCCCCCCCEEEEEECHHCCC AAADLFIFNSIEFWTGKNIITGKSPAIVDKDVGGAVFKVNDKIDASMTKAPVAPLQVNNN HHEEEEEEECEEEECCCEEEECCCCCEEECCCCCEEEEECCCCCCCHHCCCCCEEEECCC VKSTTVEQIDANTLEMHVALLDGTQQVLRGEKVDDSVAFYLDGKHITTVQISELENYVAA CCCCCHHHCCCCEEEEEEEEECCCHHHHCCCCCCCCEEEEECCCEEEEEEHHHHHHHHHH TQA CCC >Mature Secondary Structure MNFKKMKIAVAVALGVTTLTGCMGQMGVTQLVTFGNLKAVDNRYGRAGLYILLAPVYGIS CCCHHEEEEEHHHHHHHHHHHHHHCCCHHHHHHCCCEEECCCCCCCCCEEEEEECHHCCC AAADLFIFNSIEFWTGKNIITGKSPAIVDKDVGGAVFKVNDKIDASMTKAPVAPLQVNNN HHEEEEEEECEEEECCCEEEECCCCCEEECCCCCEEEEECCCCCCCHHCCCCCEEEECCC VKSTTVEQIDANTLEMHVALLDGTQQVLRGEKVDDSVAFYLDGKHITTVQISELENYVAA CCCCCHHHCCCCEEEEEEEEECCCHHHHCCCCCCCCEEEEECCCEEEEEEHHHHHHHHHH TQA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA