| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is cheB [H]
Identifier: 59713791
GI number: 59713791
Start: 686820
End: 687824
Strand: Reverse
Name: cheB [H]
Synonym: VF_A0608
Alternate gene names: 59713791
Gene position: 687824-686820 (Counterclockwise)
Preceding gene: 59713792
Following gene: 59713790
Centisome position: 51.7
GC content: 38.91
Gene sequence:
>1005_bases ATGGCCATTTCCATCTTAATCTGTGACGATTCCGCTCTGGCTCGTAAACAACTATCCCGTGTAATACCTGTATCATGGGG AGCAAATATTGAGTTTGCTCAGCATGGTTGGGACGCTATTCATAAATTAGAAGCCAATACCTTTGATATTCTTTTTCTTG ATTTAACCATGCCTGAGTTAGATGGCTACGGTACACTTGAAGAGATTAAAAAACGTAACATTACCATATCTACCGTTGTT GTTTCTGGTGATATACAACCTAAAGCACAACAACGAGTTGCTGAACTGGGTGCAAAAGCCTTCATCAAAAAACCATTAGA TAAAGCTACCTTAATCTCAACATTACAGAATATTGGTATTCAACCAGAAAAACCTGCAAGCTATCAAGTGCAGTCGGTTC AACCAATTCAGTTGCGACGTCGAGATGTTTATCTTGAGGTAGCTAACGTAGCAATAGGGCGAGCAGCAGATTCATTAGCA AGACACTTTGATGTATTTGTGCACATGCCACTTCCAAACGTTAATTTATTCGAAATGAGTGAATTACAAATGACATTACG CCACTTAGCGACGAATGAACATATGTCAGGTGTGTGCCAAGGATTTAGTGGTGAGGGTATCGCTGGTGAAGCTTTGATTT TATTAAGTGATTCAAGCGTGTCCGATTTGTTGAACTTAATGGATTACCCTGAAAGTGACGATGCAAGTTTAGAGCTTGAG CTATTGATGGATGTTTCAAACATTTTGGTTGGAGCTTTTCTTAAAGGAATTGGGGAGCAAGCAGAAGTGCGCTTTTTCCA AAGTGCACCAGTACTGCTTGGTCAGCATATTTCTATAGATAGTGTTGTTGAATCAACCAAAGGGACATTCAACCGTATCA TGGCTTTTGAAGTGAGCTATAACATTGATGGCACACAAATTAAATGCGATATGCTATTAATGATAGTTGATGAATCATTA CCAATTTTAGACAACAAACTTGCTTACCTATTGGATGACGAATAA
Upstream 100 bases:
>100_bases TAAGGCTCCTTTTTCATGTCTTATATATTCTTTACCGTATTCATGGCCTATAATCCTTGCTATAGTGCAGTAATAGATTT ATTAATTAAGGTTCAAATAG
Downstream 100 bases:
>100_bases TGAATGGGATCCCAGCTGAATTTGAACAGTTTCATTGGATGGTCGATATGGTGCAAAACGTCGATATCGGACTAATCGTA GTCGATAAAGAATTTAATGT
Product: two component response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MAISILICDDSALARKQLSRVIPVSWGANIEFAQHGWDAIHKLEANTFDILFLDLTMPELDGYGTLEEIKKRNITISTVV VSGDIQPKAQQRVAELGAKAFIKKPLDKATLISTLQNIGIQPEKPASYQVQSVQPIQLRRRDVYLEVANVAIGRAADSLA RHFDVFVHMPLPNVNLFEMSELQMTLRHLATNEHMSGVCQGFSGEGIAGEALILLSDSSVSDLLNLMDYPESDDASLELE LLMDVSNILVGAFLKGIGEQAEVRFFQSAPVLLGQHISIDSVVESTKGTFNRIMAFEVSYNIDGTQIKCDMLLMIVDESL PILDNKLAYLLDDE
Sequences:
>Translated_334_residues MAISILICDDSALARKQLSRVIPVSWGANIEFAQHGWDAIHKLEANTFDILFLDLTMPELDGYGTLEEIKKRNITISTVV VSGDIQPKAQQRVAELGAKAFIKKPLDKATLISTLQNIGIQPEKPASYQVQSVQPIQLRRRDVYLEVANVAIGRAADSLA RHFDVFVHMPLPNVNLFEMSELQMTLRHLATNEHMSGVCQGFSGEGIAGEALILLSDSSVSDLLNLMDYPESDDASLELE LLMDVSNILVGAFLKGIGEQAEVRFFQSAPVLLGQHISIDSVVESTKGTFNRIMAFEVSYNIDGTQIKCDMLLMIVDESL PILDNKLAYLLDDE >Mature_333_residues AISILICDDSALARKQLSRVIPVSWGANIEFAQHGWDAIHKLEANTFDILFLDLTMPELDGYGTLEEIKKRNITISTVVV SGDIQPKAQQRVAELGAKAFIKKPLDKATLISTLQNIGIQPEKPASYQVQSVQPIQLRRRDVYLEVANVAIGRAADSLAR HFDVFVHMPLPNVNLFEMSELQMTLRHLATNEHMSGVCQGFSGEGIAGEALILLSDSSVSDLLNLMDYPESDDASLELEL LMDVSNILVGAFLKGIGEQAEVRFFQSAPVLLGQHISIDSVVESTKGTFNRIMAFEVSYNIDGTQIKCDMLLMIVDESLP ILDNKLAYLLDDE
Specific function: Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR [H]
COG id: COG1776
COG function: function code NT; Chemotaxis protein CheC, inhibitor of MCP methylation
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR008248 - InterPro: IPR000673 - InterPro: IPR001789 [H]
Pfam domain/function: PF01339 CheB_methylest; PF00072 Response_reg [H]
EC number: =3.1.1.61 [H]
Molecular weight: Translated: 36875; Mature: 36744
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISILICDDSALARKQLSRVIPVSWGANIEFAQHGWDAIHKLEANTFDILFLDLTMPEL CEEEEEEECCHHHHHHHHHHEECCCCCCCEEEHHHCHHHHHHCCCCEEEEEEEEEECCCC DGYGTLEEIKKRNITISTVVVSGDIQPKAQQRVAELGAKAFIKKPLDKATLISTLQNIGI CCCCCHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC QPEKPASYQVQSVQPIQLRRRDVYLEVANVAIGRAADSLARHFDVFVHMPLPNVNLFEMS CCCCCCCEEECCCCHHHHHHHEEEEEEEHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHH ELQMTLRHLATNEHMSGVCQGFSGEGIAGEALILLSDSSVSDLLNLMDYPESDDASLELE HHHHHHHHHHCCHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCEEEH LLMDVSNILVGAFLKGIGEQAEVRFFQSAPVLLGQHISIDSVVESTKGTFNRIMAFEVSY HHHHHHHHHHHHHHHCCCCCHHEEEECCCCHHHCCCCCHHHHHHHCCCCHHEEEEEEEEE NIDGTQIKCDMLLMIVDESLPILDNKLAYLLDDE CCCCCEEEEEEEEEEECCCCCCCCCCEEEEECCC >Mature Secondary Structure AISILICDDSALARKQLSRVIPVSWGANIEFAQHGWDAIHKLEANTFDILFLDLTMPEL EEEEEEECCHHHHHHHHHHEECCCCCCCEEEHHHCHHHHHHCCCCEEEEEEEEEECCCC DGYGTLEEIKKRNITISTVVVSGDIQPKAQQRVAELGAKAFIKKPLDKATLISTLQNIGI CCCCCHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC QPEKPASYQVQSVQPIQLRRRDVYLEVANVAIGRAADSLARHFDVFVHMPLPNVNLFEMS CCCCCCCEEECCCCHHHHHHHEEEEEEEHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHH ELQMTLRHLATNEHMSGVCQGFSGEGIAGEALILLSDSSVSDLLNLMDYPESDDASLELE HHHHHHHHHHCCHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCEEEH LLMDVSNILVGAFLKGIGEQAEVRFFQSAPVLLGQHISIDSVVESTKGTFNRIMAFEVSY HHHHHHHHHHHHHHHCCCCCHHEEEECCCCHHHCCCCCHHHHHHHCCCCHHEEEEEEEEE NIDGTQIKCDMLLMIVDESLPILDNKLAYLLDDE CCCCCEEEEEEEEEEECCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA